RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 IL17REQ8NFR9 667 aa14.34□□□□□ -0.11
PVT1-209ENST00000520913 SRP68Q9UHB9 627 aaKnown RBP14.34□□□□□ -0.11
PVT1-209ENST00000520913 CACNA1SQ13698 1873 aa14.33□□□□□ -0.11
PVT1-209ENST00000520913 FCHSD2O94868 740 aa14.33□□□□□ -0.12
PVT1-209ENST00000520913 ZNF790Q6PG37 636 aa14.33□□□□□ -0.12
PVT1-209ENST00000520913 PHACTR3Q96KR7 559 aa14.33□□□□□ -0.12
PVT1-209ENST00000520913 ZBTB1Q9Y2K1 713 aa14.33□□□□□ -0.12
PVT1-209ENST00000520913 ANKRD31Q8N7Z5 1873 aa14.33□□□□□ -0.12
PVT1-209ENST00000520913 ZPR1O75312 459 aa14.32□□□□□ -0.12
PVT1-209ENST00000520913 TGFB2P61812 414 aa14.32□□□□□ -0.12
PVT1-209ENST00000520913 STARD3NLO95772 234 aa14.31□□□□□ -0.12
PVT1-209ENST00000520913 FKBP8Q14318 412 aa14.31□□□□□ -0.12
PVT1-209ENST00000520913 USPL1Q5W0Q7 1092 aa14.31□□□□□ -0.12
PVT1-209ENST00000520913 RTF1Q92541 710 aaKnown RBP14.31□□□□□ -0.12
PVT1-209ENST00000520913 ZNF496Q96IT1 587 aaPredicted RBP14.31□□□□□ -0.12
PVT1-209ENST00000520913 FMNL2Q96PY5 1086 aa14.31□□□□□ -0.12
PVT1-209ENST00000520913 COL11A2P13942 1736 aaPredicted RBP14.31□□□□□ -0.12
PVT1-209ENST00000520913 ARFGEF2Q9Y6D5 1785 aa14.31□□□□□ -0.12
PVT1-209ENST00000520913 ADCY9O60503 1353 aa14.31□□□□□ -0.12
PVT1-209ENST00000520913 SBF1O95248 1867 aa14.3□□□□□ -0.12
PVT1-209ENST00000520913 NEFMP07197 916 aa14.3□□□□□ -0.12
PVT1-209ENST00000520913 TEX13AQ9BXU3 409 aaPredicted RBP14.3□□□□□ -0.12
PVT1-209ENST00000520913 NARFQ9UHQ1 456 aa14.3□□□□□ -0.12
PVT1-209ENST00000520913 WWC3Q9ULE0 1092 aa14.3□□□□□ -0.12
PVT1-209ENST00000520913 ATP10DQ9P241 1426 aa14.3□□□□□ -0.12
PVT1-209ENST00000520913 BTBD11A6QL63 1104 aa14.29□□□□□ -0.12
PVT1-209ENST00000520913 DDR1Q08345 913 aa14.29□□□□□ -0.12
PVT1-209ENST00000520913 POLRMTO00411 1230 aaKnown RBP14.28□□□□□ -0.12
PVT1-209ENST00000520913 CANXP27824 592 aaKnown RBP14.28□□□□□ -0.12
PVT1-209ENST00000520913 CCDC88AQ3V6T2 1871 aa14.27□□□□□ -0.12
PVT1-209ENST00000520913 TIAM2Q8IVF5 1701 aa14.27□□□□□ -0.12
PVT1-209ENST00000520913 A0A087WZG4 1122 aa14.27□□□□□ -0.13
PVT1-209ENST00000520913 HTATSF1O43719 755 aaKnown RBP14.27□□□□□ -0.13
PVT1-209ENST00000520913 MCM10Q7L590 875 aa14.27□□□□□ -0.13
PVT1-209ENST00000520913 A0A0G2JLW4 131 aa14.26□□□□□ -0.13
PVT1-209ENST00000520913 GIGYF1O75420 1035 aaPredicted RBP14.26□□□□□ -0.13
PVT1-209ENST00000520913 DPEP1P16444 411 aa14.26□□□□□ -0.13
PVT1-209ENST00000520913 TM4SF1P30408 202 aa14.26□□□□□ -0.13
PVT1-209ENST00000520913 EIF5P55010 431 aaKnown RBP14.26□□□□□ -0.13
PVT1-209ENST00000520913 RALBP1Q15311 655 aa14.26□□□□□ -0.13
PVT1-209ENST00000520913 BCS1LQ9Y276 419 aa14.26□□□□□ -0.13
PVT1-209ENST00000520913 NUP98P52948 1817 aa14.26□□□□□ -0.13
PVT1-209ENST00000520913 MAPK8IP3Q9UPT6 1336 aa14.25□□□□□ -0.13
PVT1-209ENST00000520913 IL6STP40189 918 aaPredicted RBP14.25□□□□□ -0.13
PVT1-209ENST00000520913 PNNQ9H307 717 aaKnown RBP14.25□□□□□ -0.13
PVT1-209ENST00000520913 TNRC6CQ9HCJ0 1690 aaKnown RBP14.25□□□□□ -0.13
PVT1-209ENST00000520913 DCTN1Q14203 1278 aa14.24□□□□□ -0.13
PVT1-209ENST00000520913 NFIXQ14938 502 aa14.24□□□□□ -0.13
PVT1-209ENST00000520913 NPM2Q86SE8 214 aaKnown RBP14.24□□□□□ -0.13
PVT1-209ENST00000520913 BCL2L12Q9HB09 334 aa14.24□□□□□ -0.13
PVT1-209ENST00000520913 ZNF330Q9Y3S2 320 aaPredicted RBP14.24□□□□□ -0.13
PVT1-209ENST00000520913 CARMIL3Q8ND23 1372 aa14.23□□□□□ -0.13
PVT1-209ENST00000520913 DICER1Q9UPY3 1922 aaKnown RBP14.23□□□□□ -0.13
PVT1-209ENST00000520913 KCNQ3O43525 872 aa14.23□□□□□ -0.13
PVT1-209ENST00000520913 PLEKHF1Q96S99 279 aa14.23□□□□□ -0.13
PVT1-209ENST00000520913 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
PVT1-209ENST00000520913 ANKRD36CQ5JPF3 1778 aa14.22□□□□□ -0.13
PVT1-209ENST00000520913 MYBBP1AQ9BQG0 1328 aaKnown RBP14.22□□□□□ -0.13
PVT1-209ENST00000520913 SERPINB2P05120 415 aa14.22□□□□□ -0.13
PVT1-209ENST00000520913 KCNA3P22001 575 aa14.22□□□□□ -0.13
PVT1-209ENST00000520913 NFE2L2Q16236 605 aa14.22□□□□□ -0.13
PVT1-209ENST00000520913 FER1L6Q2WGJ9 1857 aa14.22□□□□□ -0.13
PVT1-209ENST00000520913 A1BGP04217 495 aa14.21□□□□□ -0.13
PVT1-209ENST00000520913 SNRPA1P09661 255 aaKnown RBP14.21□□□□□ -0.13
PVT1-209ENST00000520913 C1QTNF8P60827 252 aa14.21□□□□□ -0.13
PVT1-209ENST00000520913 DDX10Q13206 875 aaKnown RBP14.21□□□□□ -0.13
PVT1-209ENST00000520913 TAF7Q15545 349 aaPredicted RBP14.21□□□□□ -0.13
PVT1-209ENST00000520913 GPBP1L1Q9HC44 474 aaPredicted RBP14.21□□□□□ -0.13
PVT1-209ENST00000520913 CHRNA5P30532 468 aa14.2□□□□□ -0.14
PVT1-209ENST00000520913 DALRD3Q5D0E6 543 aaKnown RBP14.2□□□□□ -0.14
PVT1-209ENST00000520913 PNISRQ8TF01 805 aaKnown RBP14.2□□□□□ -0.14
PVT1-209ENST00000520913 TBC1D2BQ9UPU7 963 aa14.2□□□□□ -0.14
PVT1-209ENST00000520913 USP16Q9Y5T5 823 aa14.2□□□□□ -0.14
PVT1-209ENST00000520913 PRAMEF22A3QJZ6 481 aa14.19□□□□□ -0.14
PVT1-209ENST00000520913 CAMTA2O94983 1202 aa14.19□□□□□ -0.14
PVT1-209ENST00000520913 TBC1D9BQ66K14 1250 aa14.19□□□□□ -0.14
PVT1-209ENST00000520913 BICDL1Q6ZP65 573 aa14.19□□□□□ -0.14
PVT1-209ENST00000520913 ARHGAP27Q6ZUM4 889 aa14.19□□□□□ -0.14
PVT1-209ENST00000520913 DZIP3Q86Y13 1208 aaKnown RBP14.19□□□□□ -0.14
PVT1-209ENST00000520913 ZNF526Q8TF50 670 aaPredicted RBP14.18□□□□□ -0.14
PVT1-209ENST00000520913 CEP350Q5VT06 3117 aa14.17□□□□□ -0.14
PVT1-209ENST00000520913 PIP4K2AP48426 406 aaPredicted RBP14.17□□□□□ -0.14
PVT1-209ENST00000520913 ZNF652Q9Y2D9 606 aa14.17□□□□□ -0.14
PVT1-209ENST00000520913 SLX4Q8IY92 1834 aa14.17□□□□□ -0.14
PVT1-209ENST00000520913 LMOD3Q0VAK6 560 aa14.16□□□□□ -0.14
PVT1-209ENST00000520913 PRR5LQ6MZQ0 368 aa14.16□□□□□ -0.14
PVT1-209ENST00000520913 CNBD1Q8NA66 436 aa14.16□□□□□ -0.14
PVT1-209ENST00000520913 SETDB2Q96T68 719 aa14.16□□□□□ -0.14
PVT1-209ENST00000520913 PDZRN3Q9UPQ7 1066 aa14.16□□□□□ -0.14
PVT1-209ENST00000520913 SENP3-EIF4A1A0A087X0R7 540 aa14.15□□□□□ -0.14
PVT1-209ENST00000520913 H0YIN7 160 aa14.15□□□□□ -0.14
PVT1-209ENST00000520913 RGL2O15211 777 aa14.15□□□□□ -0.14
PVT1-209ENST00000520913 NPHP1O15259 732 aa14.15□□□□□ -0.14
PVT1-209ENST00000520913 PDE6BP35913 854 aa14.15□□□□□ -0.14
PVT1-209ENST00000520913 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
PVT1-209ENST00000520913 C2CD5Q86YS7 1000 aa14.15□□□□□ -0.14
PVT1-209ENST00000520913 THUMPD2Q9BTF0 503 aaKnown RBP14.15□□□□□ -0.14
PVT1-209ENST00000520913 MIS18AQ9NYP9 233 aa14.15□□□□□ -0.14
PVT1-209ENST00000520913 NBPF26B4DH59 902 aa14.14□□□□□ -0.15
PVT1-209ENST00000520913 ST5P78524 1137 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms