RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 CEP85Q6P2H3 762 aa12.39□□□□□ -0.43
SPARC-202ENST00000520687 LNPKQ9C0E8 428 aa12.39□□□□□ -0.43
SPARC-202ENST00000520687 HDAC5Q9UQL6 1122 aa12.39□□□□□ -0.43
SPARC-202ENST00000520687 NRAPQ86VF7 1730 aa12.38□□□□□ -0.43
SPARC-202ENST00000520687 TNS3Q68CZ2 1445 aa12.38□□□□□ -0.43
SPARC-202ENST00000520687 GNAI2P04899 355 aa12.38□□□□□ -0.43
SPARC-202ENST00000520687 PRELPP51888 382 aa12.38□□□□□ -0.43
SPARC-202ENST00000520687 RTL5Q5HYW3 569 aaPredicted RBP12.38□□□□□ -0.43
SPARC-202ENST00000520687 LMOD2Q6P5Q4 547 aa12.38□□□□□ -0.43
SPARC-202ENST00000520687 FHDC1Q9C0D6 1143 aaPredicted RBP12.38□□□□□ -0.43
SPARC-202ENST00000520687 EIF4A1P60842 406 aaKnown RBP12.37□□□□□ -0.43
SPARC-202ENST00000520687 HDGFL1Q5TGJ6 251 aa12.37□□□□□ -0.43
SPARC-202ENST00000520687 CASZ1Q86V15 1759 aa12.37□□□□□ -0.43
SPARC-202ENST00000520687 ATP10DQ9P241 1426 aa12.36□□□□□ -0.43
SPARC-202ENST00000520687 RGPD2P0DJD1 1756 aa12.36□□□□□ -0.43
SPARC-202ENST00000520687 RNMTO43148 476 aaKnown RBP12.36□□□□□ -0.43
SPARC-202ENST00000520687 SEC24BO95487 1268 aa12.36□□□□□ -0.43
SPARC-202ENST00000520687 FKBP5Q13451 457 aaPredicted RBP12.36□□□□□ -0.43
SPARC-202ENST00000520687 USHBP1Q8N6Y0 703 aa12.36□□□□□ -0.43
SPARC-202ENST00000520687 C22orf23Q9BZE7 217 aa12.36□□□□□ -0.43
SPARC-202ENST00000520687 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
SPARC-202ENST00000520687 LMO7Q8WWI1 1683 aa12.36□□□□□ -0.43
SPARC-202ENST00000520687 SHANK3Q9BYB0 1731 aa12.36□□□□□ -0.43
SPARC-202ENST00000520687 CPDO75976 1380 aa12.36□□□□□ -0.43
SPARC-202ENST00000520687 ERBB3P21860 1342 aa12.35□□□□□ -0.43
SPARC-202ENST00000520687 CACNA1FO60840 1977 aa12.35□□□□□ -0.43
SPARC-202ENST00000520687 RAPGEF4Q8WZA2 1011 aa12.35□□□□□ -0.43
SPARC-202ENST00000520687 SPG7Q9UQ90 795 aa12.35□□□□□ -0.43
SPARC-202ENST00000520687 RGPD5Q99666 1765 aa12.35□□□□□ -0.43
SPARC-202ENST00000520687 ZBTB7CA1YPR0 619 aa12.35□□□□□ -0.43
SPARC-202ENST00000520687 BTBD11A6QL63 1104 aa12.35□□□□□ -0.43
SPARC-202ENST00000520687 PTGER2P43116 358 aa12.35□□□□□ -0.43
SPARC-202ENST00000520687 G2E3Q7L622 706 aa12.35□□□□□ -0.43
SPARC-202ENST00000520687 MEIS3Q99687 375 aa12.35□□□□□ -0.43
SPARC-202ENST00000520687 COL18A1P39060 1754 aa12.34□□□□□ -0.43
SPARC-202ENST00000520687 ABCA3Q99758 1704 aa12.34□□□□□ -0.43
SPARC-202ENST00000520687 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
SPARC-202ENST00000520687 TATP17735 454 aaPredicted RBP12.34□□□□□ -0.43
SPARC-202ENST00000520687 RBM25P49756 843 aaKnown RBP12.34□□□□□ -0.43
SPARC-202ENST00000520687 SLC4A10Q6U841 1118 aa12.34□□□□□ -0.43
SPARC-202ENST00000520687 IBTKQ9P2D0 1353 aaPredicted RBP12.33□□□□□ -0.44
SPARC-202ENST00000520687 SPATA31A5Q5VU36 1347 aa12.33□□□□□ -0.44
SPARC-202ENST00000520687 SPATA31A7Q8IWB4 1347 aa12.33□□□□□ -0.44
SPARC-202ENST00000520687 CDC45O75419 566 aa12.33□□□□□ -0.44
SPARC-202ENST00000520687 ATP8B2P98198 1209 aa12.33□□□□□ -0.44
SPARC-202ENST00000520687 NBR1Q14596 966 aa12.33□□□□□ -0.44
SPARC-202ENST00000520687 GPR162Q16538 588 aa12.33□□□□□ -0.44
SPARC-202ENST00000520687 LGR6Q9HBX8 967 aa12.33□□□□□ -0.44
SPARC-202ENST00000520687 DBF4Q9UBU7 674 aaPredicted RBP12.33□□□□□ -0.44
SPARC-202ENST00000520687 HEG1Q9ULI3 1381 aa12.33□□□□□ -0.44
SPARC-202ENST00000520687 ZBTB7AO95365 584 aa12.32□□□□□ -0.44
SPARC-202ENST00000520687 CASC1Q6TDU7 716 aa12.32□□□□□ -0.44
SPARC-202ENST00000520687 PLEKHM2Q8IWE5 1019 aa12.32□□□□□ -0.44
SPARC-202ENST00000520687 OSBPL3Q9H4L5 887 aa12.32□□□□□ -0.44
SPARC-202ENST00000520687 BTG4Q9NY30 223 aa12.32□□□□□ -0.44
SPARC-202ENST00000520687 AXIN2Q9Y2T1 843 aa12.32□□□□□ -0.44
SPARC-202ENST00000520687 SRCIN1Q9C0H9 1055 aa12.31□□□□□ -0.44
SPARC-202ENST00000520687 F6X3S4 739 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 RAB11FIP3O75154 756 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 ALDH1L1O75891 902 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 TTC22Q5TAA0 569 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 CABLES1Q8TDN4 633 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 HYPKQ9NX55 129 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 RGPD3A6NKT7 1758 aaPredicted RBP12.3□□□□□ -0.44
SPARC-202ENST00000520687 COL14A1Q05707 1796 aaKnown RBP12.3□□□□□ -0.44
SPARC-202ENST00000520687 RGPD4Q7Z3J3 1758 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 ADAMTS7Q9UKP4 1686 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 KDM3BQ7LBC6 1761 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 UBTFL1P0CB47 393 aaPredicted RBP12.3□□□□□ -0.44
SPARC-202ENST00000520687 MFAP1P55081 439 aaKnown RBP12.3□□□□□ -0.44
SPARC-202ENST00000520687 ZC3H6P61129 1189 aaKnown RBP12.3□□□□□ -0.44
SPARC-202ENST00000520687 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 IFNL2Q8IZJ0 200 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 TNS4Q8IZW8 715 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 IL27Q8NEV9 243 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 SNX21Q969T3 373 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 NLRP2Q9NX02 1062 aa12.3□□□□□ -0.44
SPARC-202ENST00000520687 DDX58O95786 925 aaKnown RBP12.29□□□□□ -0.44
SPARC-202ENST00000520687 HSP90AB4PQ58FF6 505 aa12.29□□□□□ -0.44
SPARC-202ENST00000520687 DNAAF4Q8WXU2 420 aa12.29□□□□□ -0.44
SPARC-202ENST00000520687 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
SPARC-202ENST00000520687 USP44Q9H0E7 712 aa12.29□□□□□ -0.44
SPARC-202ENST00000520687 AOX1Q06278 1338 aa12.28□□□□□ -0.44
SPARC-202ENST00000520687 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
SPARC-202ENST00000520687 CSB-PGBD3P0DP91 1061 aa12.28□□□□□ -0.44
SPARC-202ENST00000520687 COL13A1Q5TAT6 717 aaPredicted RBP12.28□□□□□ -0.44
SPARC-202ENST00000520687 TBC1D9Q6ZT07 1266 aa12.28□□□□□ -0.44
SPARC-202ENST00000520687 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
SPARC-202ENST00000520687 ATF5Q9Y2D1 282 aaPredicted RBP12.28□□□□□ -0.44
SPARC-202ENST00000520687 PHKG2P15735 406 aa12.27□□□□□ -0.44
SPARC-202ENST00000520687 SSH3Q8TE77 659 aa12.27□□□□□ -0.44
SPARC-202ENST00000520687 SLC52A2Q9HAB3 445 aa12.27□□□□□ -0.44
SPARC-202ENST00000520687 EIF2S2P20042 333 aaKnown RBP12.26□□□□□ -0.45
SPARC-202ENST00000520687 BEND3Q5T5X7 828 aa12.26□□□□□ -0.45
SPARC-202ENST00000520687 KSR2Q6VAB6 950 aa12.26□□□□□ -0.45
SPARC-202ENST00000520687 HSCBQ8IWL3 235 aa12.26□□□□□ -0.45
SPARC-202ENST00000520687 TBC1D2Q9BYX2 928 aa12.26□□□□□ -0.45
SPARC-202ENST00000520687 MTFR1LQ9H019 292 aa12.26□□□□□ -0.45
SPARC-202ENST00000520687 DDX21Q9NR30 783 aaKnown RBP eCLIP12.26□□□□□ -0.45
SPARC-202ENST00000520687 CHPF2Q9P2E5 772 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms