RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 ERICH6BQ5W0A0 696 aa7.31□□□□□ -1.24
CTNNA1-220ENST00000520260 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
CTNNA1-220ENST00000520260 KRTAP3-2Q9BYR7 98 aa7.31□□□□□ -1.24
CTNNA1-220ENST00000520260 TFCP2L1Q9NZI6 479 aa7.31□□□□□ -1.24
CTNNA1-220ENST00000520260 KAT6BQ8WYB5 2073 aa7.31□□□□□ -1.24
CTNNA1-220ENST00000520260 MRC1P22897 1456 aa7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 SOS1Q07889 1333 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 TNS1Q9HBL0 1735 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 A0A087WZG4 1122 aa7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 LOC102724428A0A0B4J2F2 783 aa7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 POLD1P28340 1107 aa7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 ATP6V1AP38606 617 aa7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 SIK1P57059 783 aa7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 GNAI1P63096 354 aa7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 TAF7Q15545 349 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 SLC16A10Q8TF71 515 aa7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 CAMKK2Q96RR4 588 aa7.3□□□□□ -1.24
CTNNA1-220ENST00000520260 TMPOP42166 694 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-220ENST00000520260 EZH2Q15910 746 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-220ENST00000520260 NFATC2IPQ8NCF5 419 aa7.29□□□□□ -1.24
CTNNA1-220ENST00000520260 PIGBQ92521 554 aa7.29□□□□□ -1.24
CTNNA1-220ENST00000520260 MYH16Q9H6N6 1097 aa7.29□□□□□ -1.24
CTNNA1-220ENST00000520260 ADAMTS8Q9UP79 889 aa7.29□□□□□ -1.24
CTNNA1-220ENST00000520260 CEMIPQ8WUJ3 1361 aa7.29□□□□□ -1.24
CTNNA1-220ENST00000520260 BTAF1O14981 1849 aa7.29□□□□□ -1.24
CTNNA1-220ENST00000520260 SBF2Q86WG5 1849 aa7.29□□□□□ -1.24
CTNNA1-220ENST00000520260 SHANK3Q9BYB0 1731 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 KCNQ2O43526 872 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 SNRPA1P09661 255 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 SSFA2P28290 1259 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 TIE1P35590 1138 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 CCDC27Q2M243 656 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 ZNF790Q6PG37 636 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 DEFB132Q7Z7B7 95 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 FAM9BQ8IZU0 186 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 PLEKHF1Q96S99 279 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 PPP1R1BQ9UD71 204 aaPredicted RBP7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 TSPYL4Q9UJ04 414 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 ZNF652Q9Y2D9 606 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 RTCBQ9Y3I0 505 aaKnown RBP7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 SCN11AQ9UI33 1791 aa7.28□□□□□ -1.24
CTNNA1-220ENST00000520260 IL16Q14005 1332 aa7.27□□□□□ -1.24
CTNNA1-220ENST00000520260 ERBB4Q15303 1308 aa7.27□□□□□ -1.24
CTNNA1-220ENST00000520260 KDM6AO15550 1401 aaPredicted RBP7.27□□□□□ -1.24
CTNNA1-220ENST00000520260 PTCD1O75127 700 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-220ENST00000520260 HOXB7P09629 217 aa7.27□□□□□ -1.25
CTNNA1-220ENST00000520260 NEUROD2Q15784 382 aa7.27□□□□□ -1.25
CTNNA1-220ENST00000520260 SLC15A2Q16348 729 aa7.27□□□□□ -1.25
CTNNA1-220ENST00000520260 RC3H1Q5TC82 1133 aaKnown RBP7.27□□□□□ -1.25
CTNNA1-220ENST00000520260 CCDC146Q8IYE0 955 aa7.27□□□□□ -1.25
CTNNA1-220ENST00000520260 KIF12Q96FN5 646 aa7.27□□□□□ -1.25
CTNNA1-220ENST00000520260 IFT57Q9NWB7 429 aa7.27□□□□□ -1.25
CTNNA1-220ENST00000520260 ZNF831Q5JPB2 1677 aa7.27□□□□□ -1.25
CTNNA1-220ENST00000520260 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.25
CTNNA1-220ENST00000520260 RREB1Q92766 1687 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 EP400Q96L91 3159 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 RGL2O15211 777 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 ZPR1O75312 459 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 RFC4P35249 363 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 TRAPPC3LQ5T215 181 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 MCM10Q7L590 875 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 WDR63Q8IWG1 891 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 PHACTR3Q96KR7 559 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 CFAP44Q96MT7 982 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 SPON1Q9HCB6 807 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 ATG3Q9NT62 314 aa7.26□□□□□ -1.25
CTNNA1-220ENST00000520260 HEG1Q9ULI3 1381 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 APAF1O14727 1248 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 GNPATO15228 680 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 NPHP1O15259 732 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 HSP90B1P14625 803 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 GOLGA2Q08379 1002 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 R3HDM1Q15032 1099 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 KIF6Q6ZMV9 814 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 STK31Q9BXU1 1019 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 MTFR1LQ9H019 292 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 TSPYL2Q9H2G4 693 aaPredicted RBP7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 CCDC87Q9NVE4 849 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 ASAP1Q9ULH1 1129 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 LAS1LQ9Y4W2 734 aaKnown RBP7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 C5P01031 1676 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 ADAMTS7Q9UKP4 1686 aa7.25□□□□□ -1.25
CTNNA1-220ENST00000520260 ITGB4P16144 1822 aa7.24□□□□□ -1.25
CTNNA1-220ENST00000520260 LY75O60449 1722 aa7.24□□□□□ -1.25
CTNNA1-220ENST00000520260 TTLL13PA6NNM8 815 aa7.24□□□□□ -1.25
CTNNA1-220ENST00000520260 DDX58O95786 925 aaKnown RBP7.24□□□□□ -1.25
CTNNA1-220ENST00000520260 NLGN1Q8N2Q7 840 aa7.24□□□□□ -1.25
CTNNA1-220ENST00000520260 IL17REQ8NFR9 667 aa7.24□□□□□ -1.25
CTNNA1-220ENST00000520260 LGR6Q9HBX8 967 aa7.24□□□□□ -1.25
CTNNA1-220ENST00000520260 NUP188Q5SRE5 1749 aa7.24□□□□□ -1.25
CTNNA1-220ENST00000520260 CICQ96RK0 1608 aaPredicted RBP7.23□□□□□ -1.25
CTNNA1-220ENST00000520260 POTEB3A0JP26 581 aa7.23□□□□□ -1.25
CTNNA1-220ENST00000520260 E9PSI1 815 aa7.23□□□□□ -1.25
CTNNA1-220ENST00000520260 RPS6KA4O75676 772 aa7.23□□□□□ -1.25
CTNNA1-220ENST00000520260 IL6STP40189 918 aaPredicted RBP7.23□□□□□ -1.25
CTNNA1-220ENST00000520260 CRKLP46109 303 aaKnown RBP7.23□□□□□ -1.25
CTNNA1-220ENST00000520260 HSP90AB3PQ58FF7 597 aa7.23□□□□□ -1.25
CTNNA1-220ENST00000520260 POTEBQ6S5H4 581 aa7.23□□□□□ -1.25
CTNNA1-220ENST00000520260 ZNF428Q96B54 188 aa7.23□□□□□ -1.25
CTNNA1-220ENST00000520260 TOGARAM1Q9Y4F4 1720 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms