RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 COL3A1P02461 1466 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-213ENST00000519848 SCN11AQ9UI33 1791 aa11.99□□□□□ -0.49
PABPC1-213ENST00000519848 CHD4Q14839 1912 aa11.99□□□□□ -0.49
PABPC1-213ENST00000519848 MYH14Q7Z406 1995 aaKnown RBP11.99□□□□□ -0.49
PABPC1-213ENST00000519848 ZNF831Q5JPB2 1677 aa11.98□□□□□ -0.49
PABPC1-213ENST00000519848 CICQ96RK0 1608 aaPredicted RBP11.98□□□□□ -0.49
PABPC1-213ENST00000519848 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
PABPC1-213ENST00000519848 PHKG2P15735 406 aa11.98□□□□□ -0.49
PABPC1-213ENST00000519848 MPRIPQ6WCQ1 1025 aa11.98□□□□□ -0.49
PABPC1-213ENST00000519848 CCER1Q8TC90 406 aaPredicted RBP11.98□□□□□ -0.49
PABPC1-213ENST00000519848 ASAP1Q9ULH1 1129 aa11.98□□□□□ -0.49
PABPC1-213ENST00000519848 GOLGB1Q14789 3259 aaKnown RBP11.98□□□□□ -0.49
PABPC1-213ENST00000519848 AMER1Q5JTC6 1135 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-213ENST00000519848 YBX3P16989 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
PABPC1-213ENST00000519848 TFCP2L1Q9NZI6 479 aa11.96□□□□□ -0.49
PABPC1-213ENST00000519848 ATG3Q9NT62 314 aa11.95□□□□□ -0.5
PABPC1-213ENST00000519848 KIF13BQ9NQT8 1826 aa11.95□□□□□ -0.5
PABPC1-213ENST00000519848 MRC1P22897 1456 aa11.95□□□□□ -0.5
PABPC1-213ENST00000519848 PCDHB8Q9UN66 801 aa11.94□□□□□ -0.5
PABPC1-213ENST00000519848 PER1O15534 1290 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-213ENST00000519848 PHF14O94880 888 aa11.93□□□□□ -0.5
PABPC1-213ENST00000519848 PYGBP11216 843 aa11.93□□□□□ -0.5
PABPC1-213ENST00000519848 C3orf67Q6ZVT6 689 aa11.93□□□□□ -0.5
PABPC1-213ENST00000519848 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
PABPC1-213ENST00000519848 ZNF784Q8NCA9 323 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-213ENST00000519848 N4BP2Q86UW6 1770 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-213ENST00000519848 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
PABPC1-213ENST00000519848 KCPQ6ZWJ8 1503 aa11.92□□□□□ -0.5
PABPC1-213ENST00000519848 BRCA1P38398 1863 aaKnown RBP11.92□□□□□ -0.5
PABPC1-213ENST00000519848 LOC102724428A0A0B4J2F2 783 aa11.92□□□□□ -0.5
PABPC1-213ENST00000519848 IL13P35225 146 aa11.92□□□□□ -0.5
PABPC1-213ENST00000519848 SIK1P57059 783 aa11.92□□□□□ -0.5
PABPC1-213ENST00000519848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
PABPC1-213ENST00000519848 SLC16A10Q8TF71 515 aa11.91□□□□□ -0.5
PABPC1-213ENST00000519848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.5
PABPC1-213ENST00000519848 WWC3Q9ULE0 1092 aa11.91□□□□□ -0.5
PABPC1-213ENST00000519848 SIPA1L3O60292 1781 aaPredicted RBP11.91□□□□□ -0.5
PABPC1-213ENST00000519848 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
PABPC1-213ENST00000519848 ZNF530Q6P9A1 599 aaPredicted RBP11.89□□□□□ -0.51
PABPC1-213ENST00000519848 IFNL2Q8IZJ0 200 aa11.89□□□□□ -0.51
PABPC1-213ENST00000519848 TMOD3Q9NYL9 352 aa11.89□□□□□ -0.51
PABPC1-213ENST00000519848 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
PABPC1-213ENST00000519848 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
PABPC1-213ENST00000519848 SULT6B1Q6IMI4 303 aa11.88□□□□□ -0.51
PABPC1-213ENST00000519848 MORC1Q86VD1 984 aa11.88□□□□□ -0.51
PABPC1-213ENST00000519848 GNPATO15228 680 aa11.87□□□□□ -0.51
PABPC1-213ENST00000519848 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-213ENST00000519848 ADCY9O60503 1353 aa11.87□□□□□ -0.51
PABPC1-213ENST00000519848 C10orf71Q711Q0 1435 aa11.86□□□□□ -0.51
PABPC1-213ENST00000519848 HMOX1P09601 288 aa11.86□□□□□ -0.51
PABPC1-213ENST00000519848 MTHFSP49914 203 aa11.86□□□□□ -0.51
PABPC1-213ENST00000519848 CC2D1BQ5T0F9 858 aaKnown RBP11.86□□□□□ -0.51
PABPC1-213ENST00000519848 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-213ENST00000519848 AK7Q96M32 723 aa11.86□□□□□ -0.51
PABPC1-213ENST00000519848 LGR6Q9HBX8 967 aa11.86□□□□□ -0.51
PABPC1-213ENST00000519848 POLD1P28340 1107 aa11.85□□□□□ -0.51
PABPC1-213ENST00000519848 ATP6V1AP38606 617 aa11.85□□□□□ -0.51
PABPC1-213ENST00000519848 SSFA2P28290 1259 aa11.84□□□□□ -0.51
PABPC1-213ENST00000519848 CNGB1Q14028 1251 aaPredicted RBP11.84□□□□□ -0.51
PABPC1-213ENST00000519848 GPR162Q16538 588 aa11.84□□□□□ -0.51
PABPC1-213ENST00000519848 DCAF8Q5TAQ9 597 aa11.84□□□□□ -0.51
PABPC1-213ENST00000519848 DCAF5Q96JK2 942 aa11.84□□□□□ -0.51
PABPC1-213ENST00000519848 SRP68Q9UHB9 627 aaKnown RBP11.84□□□□□ -0.51
PABPC1-213ENST00000519848 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
PABPC1-213ENST00000519848 AFDNP55196 1824 aaKnown RBP11.83□□□□□ -0.51
PABPC1-213ENST00000519848 NRXN2Q9P2S2 1712 aa11.83□□□□□ -0.52
PABPC1-213ENST00000519848 NFATC2IPQ8NCF5 419 aa11.83□□□□□ -0.52
PABPC1-213ENST00000519848 KNSTRNQ9Y448 316 aa11.83□□□□□ -0.52
PABPC1-213ENST00000519848 SCN7AQ01118 1682 aa11.82□□□□□ -0.52
PABPC1-213ENST00000519848 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
PABPC1-213ENST00000519848 PTCD1O75127 700 aaKnown RBP11.82□□□□□ -0.52
PABPC1-213ENST00000519848 GYS1P13807 737 aa11.82□□□□□ -0.52
PABPC1-213ENST00000519848 SLC39A6Q13433 755 aa11.82□□□□□ -0.52
PABPC1-213ENST00000519848 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
PABPC1-213ENST00000519848 INTS5Q6P9B9 1019 aaKnown RBP11.82□□□□□ -0.52
PABPC1-213ENST00000519848 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
PABPC1-213ENST00000519848 ATP10DQ9P241 1426 aa11.82□□□□□ -0.52
PABPC1-213ENST00000519848 COL11A2P13942 1736 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-213ENST00000519848 MMP10P09238 476 aa11.81□□□□□ -0.52
PABPC1-213ENST00000519848 HOXB3P14651 431 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-213ENST00000519848 CRKLP46109 303 aaKnown RBP11.81□□□□□ -0.52
PABPC1-213ENST00000519848 DDR1Q08345 913 aa11.81□□□□□ -0.52
PABPC1-213ENST00000519848 PLEKHO1Q53GL0 409 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-213ENST00000519848 ANKRD31Q8N7Z5 1873 aa11.8□□□□□ -0.52
PABPC1-213ENST00000519848 NPC1L1Q9UHC9 1359 aa11.8□□□□□ -0.52
PABPC1-213ENST00000519848 DLEC1Q9Y238 1755 aa11.8□□□□□ -0.52
PABPC1-213ENST00000519848 RNMTO43148 476 aaKnown RBP11.8□□□□□ -0.52
PABPC1-213ENST00000519848 CABP4P57796 275 aa11.8□□□□□ -0.52
PABPC1-213ENST00000519848 DNAJC10Q8IXB1 793 aa11.8□□□□□ -0.52
PABPC1-213ENST00000519848 CD2APQ9Y5K6 639 aa11.8□□□□□ -0.52
PABPC1-213ENST00000519848 ARFGEF1Q9Y6D6 1849 aa11.79□□□□□ -0.52
PABPC1-213ENST00000519848 MKRN3Q13064 507 aaKnown RBP11.79□□□□□ -0.52
PABPC1-213ENST00000519848 RNF166Q96A37 237 aaPredicted RBP11.79□□□□□ -0.52
PABPC1-213ENST00000519848 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
PABPC1-213ENST00000519848 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
PABPC1-213ENST00000519848 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
PABPC1-213ENST00000519848 KCNA3P22001 575 aa11.78□□□□□ -0.52
PABPC1-213ENST00000519848 FKBP8Q14318 412 aa11.78□□□□□ -0.52
PABPC1-213ENST00000519848 AMOTQ4VCS5 1084 aa11.78□□□□□ -0.52
PABPC1-213ENST00000519848 FLAD1Q8NFF5 587 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms