RNA–Protein interactions for RNA: ENST00000519815.5

TRPS1-210, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-210ENST00000519815 ARHGAP45Q92619 1136 aa13.33□□□□□ -0.28
TRPS1-210ENST00000519815 GJD4Q96KN9 370 aaPredicted RBP13.33□□□□□ -0.28
TRPS1-210ENST00000519815 STK31Q9BXU1 1019 aa13.33□□□□□ -0.28
TRPS1-210ENST00000519815 PPP4R2Q9NY27 417 aa13.33□□□□□ -0.28
TRPS1-210ENST00000519815 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
TRPS1-210ENST00000519815 TRPC5Q9UL62 973 aaPredicted RBP13.33□□□□□ -0.28
TRPS1-210ENST00000519815 MRC1P22897 1456 aa13.33□□□□□ -0.28
TRPS1-210ENST00000519815 TCERG1O14776 1098 aaKnown RBP13.32□□□□□ -0.28
TRPS1-210ENST00000519815 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
TRPS1-210ENST00000519815 ATF7IPQ6VMQ6 1270 aa13.32□□□□□ -0.28
TRPS1-210ENST00000519815 EXOC6Q8TAG9 804 aa13.32□□□□□ -0.28
TRPS1-210ENST00000519815 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
TRPS1-210ENST00000519815 CRBNQ96SW2 442 aa13.32□□□□□ -0.28
TRPS1-210ENST00000519815 TMOD3Q9NYL9 352 aa13.32□□□□□ -0.28
TRPS1-210ENST00000519815 SCN11AQ9UI33 1791 aa13.32□□□□□ -0.28
TRPS1-210ENST00000519815 HEG1Q9ULI3 1381 aa13.32□□□□□ -0.28
TRPS1-210ENST00000519815 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
TRPS1-210ENST00000519815 GIGYF1O75420 1035 aaPredicted RBP13.31□□□□□ -0.28
TRPS1-210ENST00000519815 DZIP1LQ8IYY4 767 aaKnown RBP13.31□□□□□ -0.28
TRPS1-210ENST00000519815 TRIM27P14373 513 aa13.3□□□□□ -0.28
TRPS1-210ENST00000519815 HDGFL1Q5TGJ6 251 aa13.3□□□□□ -0.28
TRPS1-210ENST00000519815 FTSJ3Q8IY81 847 aaKnown RBP13.3□□□□□ -0.28
TRPS1-210ENST00000519815 MARCH10Q8NA82 808 aaPredicted RBP13.3□□□□□ -0.28
TRPS1-210ENST00000519815 PANK1Q8TE04 598 aa13.3□□□□□ -0.28
TRPS1-210ENST00000519815 FMNL2Q96PY5 1086 aa13.3□□□□□ -0.28
TRPS1-210ENST00000519815 QTRT2Q9H974 415 aaKnown RBP13.3□□□□□ -0.28
TRPS1-210ENST00000519815 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.3□□□□□ -0.28
TRPS1-210ENST00000519815 ATRNO75882 1429 aa13.3□□□□□ -0.28
TRPS1-210ENST00000519815 A0A0G2JS52 829 aa13.29□□□□□ -0.28
TRPS1-210ENST00000519815 SNRPA1P09661 255 aaKnown RBP13.29□□□□□ -0.28
TRPS1-210ENST00000519815 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
TRPS1-210ENST00000519815 MYT1Q01538 1121 aa13.29□□□□□ -0.28
TRPS1-210ENST00000519815 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
TRPS1-210ENST00000519815 CLUAP1Q96AJ1 413 aa13.29□□□□□ -0.28
TRPS1-210ENST00000519815 ZNF496Q96IT1 587 aaPredicted RBP13.29□□□□□ -0.28
TRPS1-210ENST00000519815 API5Q9BZZ5 524 aaKnown RBP13.29□□□□□ -0.28
TRPS1-210ENST00000519815 SHANK3Q9BYB0 1731 aa13.29□□□□□ -0.28
TRPS1-210ENST00000519815 SIPA1L3O60292 1781 aaPredicted RBP13.28□□□□□ -0.28
TRPS1-210ENST00000519815 KDM3BQ7LBC6 1761 aa13.28□□□□□ -0.28
TRPS1-210ENST00000519815 ONECUT3O60422 494 aaPredicted RBP13.28□□□□□ -0.28
TRPS1-210ENST00000519815 RLBP1P12271 317 aa13.28□□□□□ -0.28
TRPS1-210ENST00000519815 PIGBQ92521 554 aa13.28□□□□□ -0.28
TRPS1-210ENST00000519815 NECTIN2Q92692 538 aa13.28□□□□□ -0.28
TRPS1-210ENST00000519815 COG6Q9Y2V7 657 aa13.28□□□□□ -0.28
TRPS1-210ENST00000519815 PTPRCP08575 1304 aa13.28□□□□□ -0.28
TRPS1-210ENST00000519815 WNK3Q9BYP7 1800 aa13.27□□□□□ -0.28
TRPS1-210ENST00000519815 PRIM1P49642 420 aaKnown RBP13.27□□□□□ -0.29
TRPS1-210ENST00000519815 EVX2Q03828 476 aa13.27□□□□□ -0.29
TRPS1-210ENST00000519815 AAMPQ13685 434 aa13.27□□□□□ -0.29
TRPS1-210ENST00000519815 ZNF772Q68DY9 489 aaPredicted RBP13.27□□□□□ -0.29
TRPS1-210ENST00000519815 TNNQ9UQP3 1299 aa13.27□□□□□ -0.29
TRPS1-210ENST00000519815 MVPQ14764 893 aaKnown RBP13.26□□□□□ -0.29
TRPS1-210ENST00000519815 RNF25Q96BH1 459 aaPredicted RBP13.26□□□□□ -0.29
TRPS1-210ENST00000519815 SYTL4Q96C24 671 aaPredicted RBP13.26□□□□□ -0.29
TRPS1-210ENST00000519815 DBF4Q9UBU7 674 aaPredicted RBP13.26□□□□□ -0.29
TRPS1-210ENST00000519815 VIRMAQ69YN4 1812 aaKnown RBP13.25□□□□□ -0.29
TRPS1-210ENST00000519815 BCL9O00512 1426 aa13.25□□□□□ -0.29
TRPS1-210ENST00000519815 G2E3Q7L622 706 aa13.25□□□□□ -0.29
TRPS1-210ENST00000519815 ATG3Q9NT62 314 aa13.25□□□□□ -0.29
TRPS1-210ENST00000519815 CHPF2Q9P2E5 772 aa13.25□□□□□ -0.29
TRPS1-210ENST00000519815 ASAP1Q9ULH1 1129 aa13.25□□□□□ -0.29
TRPS1-210ENST00000519815 PRAMEF22A3QJZ6 481 aa13.24□□□□□ -0.29
TRPS1-210ENST00000519815 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
TRPS1-210ENST00000519815 FLIIQ13045 1269 aa13.24□□□□□ -0.29
TRPS1-210ENST00000519815 ITPRIPQ8IWB1 547 aa13.24□□□□□ -0.29
TRPS1-210ENST00000519815 SEPT12Q8IYM1 358 aa13.24□□□□□ -0.29
TRPS1-210ENST00000519815 TMEM57Q8N5G2 664 aa13.24□□□□□ -0.29
TRPS1-210ENST00000519815 CCDC136Q96JN2 1154 aa13.24□□□□□ -0.29
TRPS1-210ENST00000519815 HYPKQ9NX55 129 aa13.24□□□□□ -0.29
TRPS1-210ENST00000519815 ABCC4O15439 1325 aa13.23□□□□□ -0.29
TRPS1-210ENST00000519815 ACSBG1Q96GR2 724 aa13.23□□□□□ -0.29
TRPS1-210ENST00000519815 TEX13AQ9BXU3 409 aaPredicted RBP13.23□□□□□ -0.29
TRPS1-210ENST00000519815 CHMP4BQ9H444 224 aaKnown RBP13.23□□□□□ -0.29
TRPS1-210ENST00000519815 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRPS1-210ENST00000519815 DDX19BQ9UMR2 479 aa13.23□□□□□ -0.29
TRPS1-210ENST00000519815 USP16Q9Y5T5 823 aa13.23□□□□□ -0.29
TRPS1-210ENST00000519815 GLI3P10071 1580 aa13.23□□□□□ -0.29
TRPS1-210ENST00000519815 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
TRPS1-210ENST00000519815 TPRNQ4KMQ1 711 aa13.22□□□□□ -0.29
TRPS1-210ENST00000519815 INTS3Q68E01 1043 aaKnown RBP13.22□□□□□ -0.29
TRPS1-210ENST00000519815 B4GALNT3Q6L9W6 998 aa13.22□□□□□ -0.29
TRPS1-210ENST00000519815 PELP1Q8IZL8 1130 aaKnown RBP13.22□□□□□ -0.29
TRPS1-210ENST00000519815 TOGARAM1Q9Y4F4 1720 aa13.22□□□□□ -0.29
TRPS1-210ENST00000519815 THSD7AQ9UPZ6 1657 aa13.21□□□□□ -0.29
TRPS1-210ENST00000519815 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
TRPS1-210ENST00000519815 MNX1P50219 401 aaPredicted RBP13.21□□□□□ -0.29
TRPS1-210ENST00000519815 RBM6P78332 1123 aaKnown RBP13.21□□□□□ -0.29
TRPS1-210ENST00000519815 PDIA6Q15084 440 aa13.21□□□□□ -0.29
TRPS1-210ENST00000519815 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
TRPS1-210ENST00000519815 PHAXQ9H814 394 aaKnown RBP13.21□□□□□ -0.29
TRPS1-210ENST00000519815 KCPQ6ZWJ8 1503 aa13.2□□□□□ -0.3
TRPS1-210ENST00000519815 CCT4P50991 539 aaKnown RBP13.2□□□□□ -0.3
TRPS1-210ENST00000519815 HS6ST3Q8IZP7 471 aa13.2□□□□□ -0.3
TRPS1-210ENST00000519815 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
TRPS1-210ENST00000519815 ANXA1P04083 346 aa13.19□□□□□ -0.3
TRPS1-210ENST00000519815 NUBP1P53384 320 aa13.19□□□□□ -0.3
TRPS1-210ENST00000519815 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
TRPS1-210ENST00000519815 SLC4A10Q6U841 1118 aa13.19□□□□□ -0.3
TRPS1-210ENST00000519815 RGS12O14924 1447 aa13.19□□□□□ -0.3
TRPS1-210ENST00000519815 PAPPAQ13219 1627 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms