RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 LARP1Q6PKG0 1096 aaKnown RBP12.58□□□□□ -0.4
PDGFRB-205ENST00000519575 ERICH6Q7L0X2 663 aa12.58□□□□□ -0.4
PDGFRB-205ENST00000519575 IPO9Q96P70 1041 aaKnown RBP12.58□□□□□ -0.4
PDGFRB-205ENST00000519575 MEIS3Q99687 375 aa12.58□□□□□ -0.4
PDGFRB-205ENST00000519575 TEX13AQ9BXU3 409 aaPredicted RBP12.58□□□□□ -0.4
PDGFRB-205ENST00000519575 F6X3S4 739 aa12.57□□□□□ -0.4
PDGFRB-205ENST00000519575 ANKRD45Q5TZF3 282 aa12.57□□□□□ -0.4
PDGFRB-205ENST00000519575 LINS1Q8NG48 757 aa12.57□□□□□ -0.4
PDGFRB-205ENST00000519575 NECTIN2Q92692 538 aa12.56□□□□□ -0.4
PDGFRB-205ENST00000519575 C1orf115Q9H7X2 142 aa12.56□□□□□ -0.4
PDGFRB-205ENST00000519575 PI4KAP2A4QPH2 592 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 KCNQ3O43525 872 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 RAB11FIP3O75154 756 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 ATP8B2P98198 1209 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 SIRT2Q8IXJ6 389 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 PI4KAP1Q8N8J0 262 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 LNPKQ9C0E8 428 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 PHAXQ9H814 394 aaKnown RBP12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 DAXXQ9UER7 740 aaPredicted RBP12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 GLI3P10071 1580 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 ITGB4P16144 1822 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 ADCY9O60503 1353 aa12.55□□□□□ -0.4
PDGFRB-205ENST00000519575 BEND3Q5T5X7 828 aa12.54□□□□□ -0.4
PDGFRB-205ENST00000519575 CASC1Q6TDU7 716 aa12.54□□□□□ -0.4
PDGFRB-205ENST00000519575 ZNF496Q96IT1 587 aaPredicted RBP12.54□□□□□ -0.4
PDGFRB-205ENST00000519575 JCADQ9P266 1359 aa12.54□□□□□ -0.4
PDGFRB-205ENST00000519575 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
PDGFRB-205ENST00000519575 ARFGEF2Q9Y6D5 1785 aa12.53□□□□□ -0.4
PDGFRB-205ENST00000519575 KCPQ6ZWJ8 1503 aa12.53□□□□□ -0.4
PDGFRB-205ENST00000519575 EXOC5O00471 708 aa12.53□□□□□ -0.4
PDGFRB-205ENST00000519575 ERC1Q8IUD2 1116 aa12.53□□□□□ -0.4
PDGFRB-205ENST00000519575 USP44Q9H0E7 712 aa12.53□□□□□ -0.4
PDGFRB-205ENST00000519575 C9orf78Q9NZ63 289 aaPredicted RBP12.53□□□□□ -0.4
PDGFRB-205ENST00000519575 MAP3K2Q9Y2U5 619 aa12.53□□□□□ -0.4
PDGFRB-205ENST00000519575 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.53□□□□□ -0.4
PDGFRB-205ENST00000519575 AFDNP55196 1824 aaKnown RBP12.53□□□□□ -0.4
PDGFRB-205ENST00000519575 MTX1Q13505 466 aa12.52□□□□□ -0.41
PDGFRB-205ENST00000519575 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
PDGFRB-205ENST00000519575 DDX54Q8TDD1 881 aaKnown RBP12.52□□□□□ -0.41
PDGFRB-205ENST00000519575 LRRCC1Q9C099 1032 aa12.52□□□□□ -0.41
PDGFRB-205ENST00000519575 AOX1Q06278 1338 aa12.52□□□□□ -0.41
PDGFRB-205ENST00000519575 COL15A1P39059 1388 aa12.52□□□□□ -0.41
PDGFRB-205ENST00000519575 SLIT2O94813 1529 aa12.52□□□□□ -0.41
PDGFRB-205ENST00000519575 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
PDGFRB-205ENST00000519575 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
PDGFRB-205ENST00000519575 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
PDGFRB-205ENST00000519575 LRRFIP2Q9Y608 721 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-205ENST00000519575 UTYO14607 1347 aa12.51□□□□□ -0.41
PDGFRB-205ENST00000519575 SPATA31A6Q5VVP1 1343 aa12.51□□□□□ -0.41
PDGFRB-205ENST00000519575 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
PDGFRB-205ENST00000519575 UBAP1LF5GYI3 381 aa12.5□□□□□ -0.41
PDGFRB-205ENST00000519575 BECN1Q14457 450 aa12.5□□□□□ -0.41
PDGFRB-205ENST00000519575 ANKRD13DQ6ZTN6 518 aa12.5□□□□□ -0.41
PDGFRB-205ENST00000519575 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
PDGFRB-205ENST00000519575 SKAP1Q86WV1 359 aa12.5□□□□□ -0.41
PDGFRB-205ENST00000519575 PLBD2Q8NHP8 589 aa12.5□□□□□ -0.41
PDGFRB-205ENST00000519575 METTL22Q9BUU2 404 aaPredicted RBP12.5□□□□□ -0.41
PDGFRB-205ENST00000519575 OSBPL3Q9H4L5 887 aa12.5□□□□□ -0.41
PDGFRB-205ENST00000519575 NOP58Q9Y2X3 529 aaKnown RBP12.5□□□□□ -0.41
PDGFRB-205ENST00000519575 SPATA31A1Q5TZJ5 1347 aa12.5□□□□□ -0.41
PDGFRB-205ENST00000519575 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
PDGFRB-205ENST00000519575 DOT1LQ8TEK3 1739 aa12.49□□□□□ -0.41
PDGFRB-205ENST00000519575 GRM8O00222 908 aa12.49□□□□□ -0.41
PDGFRB-205ENST00000519575 CDC45O75419 566 aa12.49□□□□□ -0.41
PDGFRB-205ENST00000519575 STARD3NLO95772 234 aa12.49□□□□□ -0.41
PDGFRB-205ENST00000519575 POLA2Q14181 598 aa12.49□□□□□ -0.41
PDGFRB-205ENST00000519575 PDIA6Q15084 440 aa12.49□□□□□ -0.41
PDGFRB-205ENST00000519575 BCL9O00512 1426 aa12.48□□□□□ -0.41
PDGFRB-205ENST00000519575 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
PDGFRB-205ENST00000519575 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
PDGFRB-205ENST00000519575 XAGE3Q8WTP9 111 aa12.48□□□□□ -0.41
PDGFRB-205ENST00000519575 KIF1BPQ96EK5 621 aa12.48□□□□□ -0.41
PDGFRB-205ENST00000519575 USP35Q9P2H5 1018 aa12.48□□□□□ -0.41
PDGFRB-205ENST00000519575 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
PDGFRB-205ENST00000519575 SRGAP3O43295 1099 aa12.47□□□□□ -0.41
PDGFRB-205ENST00000519575 PIP4K2BP78356 416 aa12.47□□□□□ -0.41
PDGFRB-205ENST00000519575 DDB1Q16531 1140 aa12.47□□□□□ -0.41
PDGFRB-205ENST00000519575 PROSER3Q2NL68 480 aa12.47□□□□□ -0.41
PDGFRB-205ENST00000519575 TTC22Q5TAA0 569 aa12.47□□□□□ -0.41
PDGFRB-205ENST00000519575 COPS6Q7L5N1 327 aa12.47□□□□□ -0.41
PDGFRB-205ENST00000519575 PLEKHM2Q8IWE5 1019 aa12.47□□□□□ -0.41
PDGFRB-205ENST00000519575 IL27Q8NEV9 243 aa12.47□□□□□ -0.41
PDGFRB-205ENST00000519575 GPATCH3Q96I76 525 aa12.47□□□□□ -0.41
PDGFRB-205ENST00000519575 MYL6BP14649 208 aa12.46□□□□□ -0.41
PDGFRB-205ENST00000519575 AIMP1Q12904 312 aaKnown RBP12.46□□□□□ -0.41
PDGFRB-205ENST00000519575 PPP1R42Q7Z4L9 355 aa12.46□□□□□ -0.41
PDGFRB-205ENST00000519575 TBC1D32Q96NH3 1257 aa12.46□□□□□ -0.41
PDGFRB-205ENST00000519575 USP16Q9Y5T5 823 aa12.46□□□□□ -0.41
PDGFRB-205ENST00000519575 AK9Q5TCS8 1911 aa12.45□□□□□ -0.42
PDGFRB-205ENST00000519575 NEURL1BA8MQ27 555 aa12.45□□□□□ -0.42
PDGFRB-205ENST00000519575 ADAMTS2O95450 1211 aa12.45□□□□□ -0.42
PDGFRB-205ENST00000519575 ANXA1P04083 346 aa12.45□□□□□ -0.42
PDGFRB-205ENST00000519575 MX1P20591 662 aa12.45□□□□□ -0.42
PDGFRB-205ENST00000519575 GCKRQ14397 625 aa12.45□□□□□ -0.42
PDGFRB-205ENST00000519575 HSP90AB3PQ58FF7 597 aa12.45□□□□□ -0.42
PDGFRB-205ENST00000519575 KIF6Q6ZMV9 814 aa12.45□□□□□ -0.42
PDGFRB-205ENST00000519575 UNC5CLQ8IV45 518 aa12.45□□□□□ -0.42
PDGFRB-205ENST00000519575 KAT6BQ8WYB5 2073 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms