RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ARFGEF1Q9Y6D6 1849 aa10.23□□□□□ -0.77
CTNNA1-216ENST00000519489 NFKBIEO00221 500 aa10.22□□□□□ -0.77
CTNNA1-216ENST00000519489 LMNB1P20700 586 aa10.22□□□□□ -0.77
CTNNA1-216ENST00000519489 ANKRD24Q8TF21 1146 aa10.22□□□□□ -0.77
CTNNA1-216ENST00000519489 CABP2Q9NPB3 220 aa10.21□□□□□ -0.77
CTNNA1-216ENST00000519489 CABP1Q9NZU7 370 aa10.21□□□□□ -0.77
CTNNA1-216ENST00000519489 CIZ1Q9ULV3 898 aaPredicted RBP10.21□□□□□ -0.77
CTNNA1-216ENST00000519489 TAF1LQ8IZX4 1826 aa10.21□□□□□ -0.78
CTNNA1-216ENST00000519489 FMR1Q06787 632 aaKnown RBP eCLIP10.2□□□□□ -0.787e-7■■■■□ 24.3
CTNNA1-216ENST00000519489 ITPK1Q13572 414 aa10.2□□□□□ -0.78
CTNNA1-216ENST00000519489 KCNH5Q8NCM2 988 aa10.2□□□□□ -0.78
CTNNA1-216ENST00000519489 THSD7BQ9C0I4 1608 aa10.2□□□□□ -0.78
CTNNA1-216ENST00000519489 CCDC87Q9NVE4 849 aa10.2□□□□□ -0.78
CTNNA1-216ENST00000519489 MKI67P46013 3256 aaKnown RBP10.2□□□□□ -0.78
CTNNA1-216ENST00000519489 TTC21BQ7Z4L5 1316 aa10.19□□□□□ -0.78
CTNNA1-216ENST00000519489 AOC2O75106 756 aa10.19□□□□□ -0.78
CTNNA1-216ENST00000519489 DDNO94850 711 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-216ENST00000519489 GNPATO15228 680 aa10.18□□□□□ -0.78
CTNNA1-216ENST00000519489 GYS1P13807 737 aa10.18□□□□□ -0.78
CTNNA1-216ENST00000519489 CYP4F22Q6NT55 531 aa10.18□□□□□ -0.78
CTNNA1-216ENST00000519489 GCC1Q96CN9 775 aa10.18□□□□□ -0.78
CTNNA1-216ENST00000519489 CAPNS2Q96L46 248 aa10.18□□□□□ -0.78
CTNNA1-216ENST00000519489 OCEL1Q9H607 264 aa10.18□□□□□ -0.78
CTNNA1-216ENST00000519489 PITPNM2Q9BZ72 1349 aa10.17□□□□□ -0.78
CTNNA1-216ENST00000519489 PSEN1P49768 467 aa10.17□□□□□ -0.78
CTNNA1-216ENST00000519489 TMF1P82094 1093 aa10.17□□□□□ -0.78
CTNNA1-216ENST00000519489 DDR1Q08345 913 aa10.17□□□□□ -0.78
CTNNA1-216ENST00000519489 LDHDQ86WU2 507 aa10.17□□□□□ -0.78
CTNNA1-216ENST00000519489 ZCRB1Q8TBF4 217 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-216ENST00000519489 GPR101Q96P66 508 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-216ENST00000519489 COL6A3P12111 3177 aa10.17□□□□□ -0.78
CTNNA1-216ENST00000519489 MEGF6O75095 1541 aa10.17□□□□□ -0.78
CTNNA1-216ENST00000519489 C4AP0C0L4 1744 aa10.16□□□□□ -0.78
CTNNA1-216ENST00000519489 CASP8AP2Q9UKL3 1982 aa10.16□□□□□ -0.78
CTNNA1-216ENST00000519489 PDAP1Q13442 181 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-216ENST00000519489 TAF1DQ9H5J8 278 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-216ENST00000519489 GRM1Q13255 1194 aa10.15□□□□□ -0.78
CTNNA1-216ENST00000519489 MPRIPQ6WCQ1 1025 aa10.15□□□□□ -0.78
CTNNA1-216ENST00000519489 NLGN1Q8N2Q7 840 aa10.15□□□□□ -0.78
CTNNA1-216ENST00000519489 SLC17A8Q8NDX2 589 aa10.15□□□□□ -0.78
CTNNA1-216ENST00000519489 TIAM2Q8IVF5 1701 aa10.14□□□□□ -0.79
CTNNA1-216ENST00000519489 MAP1SQ66K74 1059 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-216ENST00000519489 ARHGEF1Q92888 912 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-216ENST00000519489 ABT1Q9ULW3 272 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-216ENST00000519489 ADAMTS7Q9UKP4 1686 aa10.14□□□□□ -0.79
CTNNA1-216ENST00000519489 SRPK2P78362 688 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-216ENST00000519489 GOLGA2Q08379 1002 aa10.13□□□□□ -0.79
CTNNA1-216ENST00000519489 MKRN3Q13064 507 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-216ENST00000519489 DPY19L2Q6NUT2 758 aa10.13□□□□□ -0.79
CTNNA1-216ENST00000519489 PIGBQ92521 554 aa10.13□□□□□ -0.79
CTNNA1-216ENST00000519489 ZIC5Q96T25 663 aa10.13□□□□□ -0.79
CTNNA1-216ENST00000519489 BEGAINQ9BUH8 593 aa10.13□□□□□ -0.79
CTNNA1-216ENST00000519489 PARP3Q9Y6F1 533 aa10.13□□□□□ -0.79
CTNNA1-216ENST00000519489 LOC102724428A0A0B4J2F2 783 aa10.12□□□□□ -0.79
CTNNA1-216ENST00000519489 POTEMA6NI47 508 aa10.12□□□□□ -0.79
CTNNA1-216ENST00000519489 SIK1P57059 783 aa10.12□□□□□ -0.79
CTNNA1-216ENST00000519489 NBPF1Q3BBV0 1214 aa10.12□□□□□ -0.79
CTNNA1-216ENST00000519489 CNTROBQ8N137 903 aa10.12□□□□□ -0.79
CTNNA1-216ENST00000519489 LTV1Q96GA3 475 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-216ENST00000519489 MAP2P11137 1827 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-216ENST00000519489 CST9Q5W186 159 aa10.11□□□□□ -0.79
CTNNA1-216ENST00000519489 SLC4A9Q96Q91 983 aa10.11□□□□□ -0.79
CTNNA1-216ENST00000519489 FAM208AQ9UK61 1670 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-216ENST00000519489 ERFEQ4G0M1 354 aa10.1□□□□□ -0.79
CTNNA1-216ENST00000519489 EAPPQ56P03 285 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-216ENST00000519489 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
CTNNA1-216ENST00000519489 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-216ENST00000519489 POTEGQ6S5H5 508 aa10.1□□□□□ -0.79
CTNNA1-216ENST00000519489 NBPF15Q8N660 670 aa10.1□□□□□ -0.79
CTNNA1-216ENST00000519489 PDCD7Q8N8D1 485 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-216ENST00000519489 DDX21Q9NR30 783 aaKnown RBP eCLIP10.1□□□□□ -0.79
CTNNA1-216ENST00000519489 SRP68Q9UHB9 627 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-216ENST00000519489 KDM2AQ9Y2K7 1162 aa10.1□□□□□ -0.79
CTNNA1-216ENST00000519489 ADAMTSL1Q8N6G6 1762 aa10.1□□□□□ -0.79
CTNNA1-216ENST00000519489 CYP27B1O15528 508 aa10.09□□□□□ -0.79
CTNNA1-216ENST00000519489 PAXIP1Q6ZW49 1069 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-216ENST00000519489 L3MBTL3Q96JM7 780 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-216ENST00000519489 MPHOSPH9Q99550 1183 aa10.09□□□□□ -0.79
CTNNA1-216ENST00000519489 MAP2K2P36507 400 aa10.08□□□□□ -0.8
CTNNA1-216ENST00000519489 CIAPIN1Q6FI81 312 aa10.08□□□□□ -0.8
CTNNA1-216ENST00000519489 SLAIN1Q8ND83 568 aa10.08□□□□□ -0.8
CTNNA1-216ENST00000519489 SMARCC1Q92922 1105 aaPredicted RBP10.08□□□□□ -0.8
CTNNA1-216ENST00000519489 ASAP1Q9ULH1 1129 aa10.08□□□□□ -0.8
CTNNA1-216ENST00000519489 TRIOBPQ9H2D6 2365 aa10.07□□□□□ -0.8
CTNNA1-216ENST00000519489 USP31Q70CQ4 1352 aa10.07□□□□□ -0.8
CTNNA1-216ENST00000519489 POLRMTO00411 1230 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-216ENST00000519489 ECE1P42892 770 aa10.07□□□□□ -0.8
CTNNA1-216ENST00000519489 NME9Q86XW9 330 aa10.07□□□□□ -0.8
CTNNA1-216ENST00000519489 USHBP1Q8N6Y0 703 aa10.07□□□□□ -0.8
CTNNA1-216ENST00000519489 BRCA2P51587 3418 aa10.07□□□□□ -0.8
CTNNA1-216ENST00000519489 RANBP2P49792 3224 aaKnown RBP10.07□□□□□ -0.8
CTNNA1-216ENST00000519489 TTC21AQ8NDW8 1320 aa10.07□□□□□ -0.8
CTNNA1-216ENST00000519489 TRAF5O00463 557 aa10.06□□□□□ -0.8
CTNNA1-216ENST00000519489 CA12O43570 354 aa10.06□□□□□ -0.8
CTNNA1-216ENST00000519489 ATP6V1AP38606 617 aa10.06□□□□□ -0.8
CTNNA1-216ENST00000519489 IP6K1Q92551 441 aa10.06□□□□□ -0.8
CTNNA1-216ENST00000519489 HPS5Q9UPZ3 1129 aa10.06□□□□□ -0.8
CTNNA1-216ENST00000519489 RTCBQ9Y3I0 505 aaKnown RBP10.06□□□□□ -0.8
CTNNA1-216ENST00000519489 TLL2Q9Y6L7 1015 aa10.06□□□□□ -0.8
CTNNA1-216ENST00000519489 FBLN1P23142 703 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms