RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 R3HDM1Q15032 1099 aaKnown RBP9.33□□□□□ -0.92
SLIT3-205ENST00000519486 FAM177BA6PVY3 158 aa9.33□□□□□ -0.92
SLIT3-205ENST00000519486 MRPL50Q8N5N7 158 aaKnown RBP9.33□□□□□ -0.92
SLIT3-205ENST00000519486 RPGRQ92834 1020 aaKnown RBP9.33□□□□□ -0.92
SLIT3-205ENST00000519486 IL1RAPL2Q9NP60 686 aa9.33□□□□□ -0.92
SLIT3-205ENST00000519486 KDM5AP29375 1690 aaKnown RBP9.33□□□□□ -0.92
SLIT3-205ENST00000519486 PRPF40AO75400 957 aaKnown RBP9.33□□□□□ -0.92
SLIT3-205ENST00000519486 HDGFL1Q5TGJ6 251 aa9.33□□□□□ -0.92
SLIT3-205ENST00000519486 TNPO1Q92973 898 aaKnown RBP9.33□□□□□ -0.92
SLIT3-205ENST00000519486 PCDH11XQ9BZA7 1347 aa9.33□□□□□ -0.92
SLIT3-205ENST00000519486 PCDH11YQ9BZA8 1340 aa9.33□□□□□ -0.92
SLIT3-205ENST00000519486 PPIP5K1Q6PFW1 1433 aa9.33□□□□□ -0.92
SLIT3-205ENST00000519486 DIAPH3Q9NSV4 1193 aa9.32□□□□□ -0.92
SLIT3-205ENST00000519486 SYNMO15061 1565 aa9.32□□□□□ -0.92
SLIT3-205ENST00000519486 SYAP1Q96A49 352 aaPredicted RBP9.32□□□□□ -0.92
SLIT3-205ENST00000519486 MAP4K4O95819 1239 aaPredicted RBP9.32□□□□□ -0.92
SLIT3-205ENST00000519486 AIMP1Q12904 312 aaKnown RBP9.32□□□□□ -0.92
SLIT3-205ENST00000519486 ERC2O15083 957 aa9.32□□□□□ -0.92
SLIT3-205ENST00000519486 CCT4P50991 539 aaKnown RBP9.32□□□□□ -0.92
SLIT3-205ENST00000519486 TSHZ3Q63HK5 1081 aa9.32□□□□□ -0.92
SLIT3-205ENST00000519486 PDCL2Q8N4E4 241 aa9.32□□□□□ -0.92
SLIT3-205ENST00000519486 AIDAQ96BJ3 306 aa9.32□□□□□ -0.92
SLIT3-205ENST00000519486 GPATCH3Q96I76 525 aa9.32□□□□□ -0.92
SLIT3-205ENST00000519486 MEIS3Q99687 375 aa9.32□□□□□ -0.92
SLIT3-205ENST00000519486 UNC13BO14795 1591 aa9.31□□□□□ -0.92
SLIT3-205ENST00000519486 SSFA2P28290 1259 aa9.31□□□□□ -0.92
SLIT3-205ENST00000519486 IRX3P78415 501 aaPredicted RBP9.31□□□□□ -0.92
SLIT3-205ENST00000519486 EN1Q05925 392 aaPredicted RBP9.31□□□□□ -0.92
SLIT3-205ENST00000519486 CCAR1Q8IX12 1150 aaKnown RBP9.31□□□□□ -0.92
SLIT3-205ENST00000519486 RNF214Q8ND24 703 aa9.31□□□□□ -0.92
SLIT3-205ENST00000519486 LRRCC1Q9C099 1032 aa9.31□□□□□ -0.92
SLIT3-205ENST00000519486 ATF5Q9Y2D1 282 aaPredicted RBP9.31□□□□□ -0.92
SLIT3-205ENST00000519486 PLXNC1O60486 1568 aa9.31□□□□□ -0.92
SLIT3-205ENST00000519486 POLR1AO95602 1720 aaPredicted RBP9.31□□□□□ -0.92
SLIT3-205ENST00000519486 UTP14CQ5TAP6 766 aaKnown RBP9.31□□□□□ -0.92
SLIT3-205ENST00000519486 CIZ1Q9ULV3 898 aaPredicted RBP9.31□□□□□ -0.92
SLIT3-205ENST00000519486 KIF3AQ9Y496 699 aa9.31□□□□□ -0.92
SLIT3-205ENST00000519486 IQSEC2Q5JU85 1478 aa9.31□□□□□ -0.92
SLIT3-205ENST00000519486 ZBTB7BO15156 539 aaPredicted RBP9.31□□□□□ -0.92
SLIT3-205ENST00000519486 ARHGAP45Q92619 1136 aa9.31□□□□□ -0.92
SLIT3-205ENST00000519486 KAT6BQ8WYB5 2073 aa9.31□□□□□ -0.92
SLIT3-205ENST00000519486 HSP90AB3PQ58FF7 597 aa9.3□□□□□ -0.92
SLIT3-205ENST00000519486 USHBP1Q8N6Y0 703 aa9.3□□□□□ -0.92
SLIT3-205ENST00000519486 GNPATO15228 680 aa9.3□□□□□ -0.92
SLIT3-205ENST00000519486 DMTNQ08495 405 aa9.3□□□□□ -0.92
SLIT3-205ENST00000519486 CLTCL1P53675 1640 aa9.3□□□□□ -0.92
SLIT3-205ENST00000519486 FSD2A1L4K1 749 aa9.3□□□□□ -0.92
SLIT3-205ENST00000519486 IFIT2P09913 472 aaKnown RBP9.3□□□□□ -0.92
SLIT3-205ENST00000519486 EIF4A2Q14240 407 aaKnown RBP9.3□□□□□ -0.92
SLIT3-205ENST00000519486 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
SLIT3-205ENST00000519486 PLEKHG3A1L390 1219 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 NLGN1Q8N2Q7 840 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 YY1P25490 414 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 NF2P35240 595 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 PLEKHF1Q96S99 279 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 UPF3BQ9BZI7 483 aaKnown RBP9.29□□□□□ -0.92
SLIT3-205ENST00000519486 GOLGA6L6A8MZA4 724 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 TTLL12Q14166 644 aaPredicted RBP9.29□□□□□ -0.92
SLIT3-205ENST00000519486 CARD10Q9BWT7 1032 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 TMOD2Q9NZR1 351 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 MCM5P33992 734 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 DCCP43146 1447 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 ARHGAP27Q6ZUM4 889 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 RIC3Q7Z5B4 369 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 PRDM4Q9UKN5 801 aa9.29□□□□□ -0.92
SLIT3-205ENST00000519486 PTCH1Q13635 1447 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 DNAJC2Q99543 621 aaKnown RBP9.28□□□□□ -0.92
SLIT3-205ENST00000519486 SBNO1A3KN83 1393 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 METP08581 1390 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 KIAA0232Q92628 1395 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 MYOM2P54296 1465 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 ZRSR1Q15695 479 aaKnown RBP9.28□□□□□ -0.92
SLIT3-205ENST00000519486 NUTM1Q86Y26 1132 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 SLC16A10Q8TF71 515 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 IP6K1Q92551 441 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 ZNF219Q9P2Y4 722 aaPredicted RBP9.28□□□□□ -0.92
SLIT3-205ENST00000519486 GNAT3A8MTJ3 354 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 SRGAP3O43295 1099 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 IL13P35225 146 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 FMNL2Q96PY5 1086 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 SETDB2Q96T68 719 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 SRCIN1Q9C0H9 1055 aa9.28□□□□□ -0.92
SLIT3-205ENST00000519486 CTDP1Q9Y5B0 961 aaPredicted RBP9.28□□□□□ -0.92
SLIT3-205ENST00000519486 SPDYE4A6NLX3 237 aa9.27□□□□□ -0.92
SLIT3-205ENST00000519486 SDSP20132 328 aa9.27□□□□□ -0.92
SLIT3-205ENST00000519486 SOGA3Q5TF21 947 aa9.27□□□□□ -0.92
SLIT3-205ENST00000519486 DRC7Q8IY82 874 aa9.27□□□□□ -0.92
SLIT3-205ENST00000519486 GRM1Q13255 1194 aa9.27□□□□□ -0.93
SLIT3-205ENST00000519486 TTC22Q5TAA0 569 aa9.27□□□□□ -0.93
SLIT3-205ENST00000519486 LARP1Q6PKG0 1096 aaKnown RBP9.27□□□□□ -0.93
SLIT3-205ENST00000519486 CLASRPQ8N2M8 674 aaKnown RBP9.27□□□□□ -0.93
SLIT3-205ENST00000519486 OTUD7AQ8TE49 926 aaPredicted RBP9.27□□□□□ -0.93
SLIT3-205ENST00000519486 TSPYL1Q9H0U9 437 aa9.27□□□□□ -0.93
SLIT3-205ENST00000519486 CLTCQ00610 1675 aaKnown RBP9.27□□□□□ -0.93
SLIT3-205ENST00000519486 VPS37CA5D8V6 355 aaPredicted RBP9.27□□□□□ -0.93
SLIT3-205ENST00000519486 G3BP1Q13283 466 aaKnown RBP eCLIP9.27□□□□□ -0.93
SLIT3-205ENST00000519486 NBPF6Q5VWK0 638 aa9.27□□□□□ -0.93
SLIT3-205ENST00000519486 NBPF5PQ86XG9 351 aaPredicted RBP9.27□□□□□ -0.93
SLIT3-205ENST00000519486 RUFY2Q8WXA3 655 aa9.27□□□□□ -0.93
SLIT3-205ENST00000519486 NBPF4Q96M43 638 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms