RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 COL15A1P39059 1388 aa14.57□□□□□ -0.08
PVT1-208ENST00000519481 N4BP2Q86UW6 1770 aaPredicted RBP14.57□□□□□ -0.08
PVT1-208ENST00000519481 POLRMTO00411 1230 aaKnown RBP14.56□□□□□ -0.08
PVT1-208ENST00000519481 TM4SF1P30408 202 aa14.56□□□□□ -0.08
PVT1-208ENST00000519481 NPM2Q86SE8 214 aaKnown RBP14.56□□□□□ -0.08
PVT1-208ENST00000519481 COL3A1P02461 1466 aaPredicted RBP14.56□□□□□ -0.08
PVT1-208ENST00000519481 A0A087WZG4 1122 aa14.55□□□□□ -0.08
PVT1-208ENST00000519481 CANXP27824 592 aaKnown RBP14.55□□□□□ -0.08
PVT1-208ENST00000519481 KCPQ6ZWJ8 1503 aa14.55□□□□□ -0.08
PVT1-208ENST00000519481 KCNA3P22001 575 aa14.54□□□□□ -0.08
PVT1-208ENST00000519481 PRKAR2BP31323 418 aa14.54□□□□□ -0.08
PVT1-208ENST00000519481 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
PVT1-208ENST00000519481 ZNF790Q6PG37 636 aa14.54□□□□□ -0.08
PVT1-208ENST00000519481 IL17REQ8NFR9 667 aa14.54□□□□□ -0.08
PVT1-208ENST00000519481 FMNL2Q96PY5 1086 aa14.54□□□□□ -0.08
PVT1-208ENST00000519481 ADAMTS7Q9UKP4 1686 aa14.54□□□□□ -0.08
PVT1-208ENST00000519481 KIAA1551Q9HCM1 1747 aa14.54□□□□□ -0.08
PVT1-208ENST00000519481 VIRMAQ69YN4 1812 aaKnown RBP14.53□□□□□ -0.08
PVT1-208ENST00000519481 U2AF1L5P0DN76 240 aaPredicted RBP14.53□□□□□ -0.08
PVT1-208ENST00000519481 U2AF1Q01081 240 aaKnown RBP eCLIP14.53□□□□□ -0.08
PVT1-208ENST00000519481 NFIXQ14938 502 aa14.53□□□□□ -0.08
PVT1-208ENST00000519481 RTF1Q92541 710 aaKnown RBP14.53□□□□□ -0.08
PVT1-208ENST00000519481 ZNF496Q96IT1 587 aaPredicted RBP14.53□□□□□ -0.08
PVT1-208ENST00000519481 HEG1Q9ULI3 1381 aa14.52□□□□□ -0.08
PVT1-208ENST00000519481 SERPINB2P05120 415 aa14.52□□□□□ -0.09
PVT1-208ENST00000519481 CHRNA5P30532 468 aa14.52□□□□□ -0.09
PVT1-208ENST00000519481 RSPH6AQ9H0K4 717 aa14.52□□□□□ -0.09
PVT1-208ENST00000519481 ZNF330Q9Y3S2 320 aaPredicted RBP14.52□□□□□ -0.09
PVT1-208ENST00000519481 BTBD11A6QL63 1104 aa14.51□□□□□ -0.09
PVT1-208ENST00000519481 HSPA6P17066 643 aa14.51□□□□□ -0.09
PVT1-208ENST00000519481 PPP2R1AP30153 589 aa14.51□□□□□ -0.09
PVT1-208ENST00000519481 EIF5P55010 431 aaKnown RBP14.51□□□□□ -0.09
PVT1-208ENST00000519481 C9orf131Q5VYM1 1079 aa14.51□□□□□ -0.09
PVT1-208ENST00000519481 KIF3CO14782 793 aa14.5□□□□□ -0.09
PVT1-208ENST00000519481 NEFMP07197 916 aa14.5□□□□□ -0.09
PVT1-208ENST00000519481 BICDL1Q6ZP65 573 aa14.5□□□□□ -0.09
PVT1-208ENST00000519481 PHACTR3Q96KR7 559 aa14.5□□□□□ -0.09
PVT1-208ENST00000519481 BRCA1P38398 1863 aaKnown RBP14.49□□□□□ -0.09
PVT1-208ENST00000519481 H0YIN7 160 aa14.49□□□□□ -0.09
PVT1-208ENST00000519481 IL6STP40189 918 aaPredicted RBP14.49□□□□□ -0.09
PVT1-208ENST00000519481 C16orf71Q8IYS4 520 aaPredicted RBP14.49□□□□□ -0.09
PVT1-208ENST00000519481 BCL2L12Q9HB09 334 aa14.49□□□□□ -0.09
PVT1-208ENST00000519481 RNF181Q9P0P0 153 aa14.49□□□□□ -0.09
PVT1-208ENST00000519481 UBR2Q8IWV8 1755 aa14.49□□□□□ -0.09
PVT1-208ENST00000519481 CEMIPQ8WUJ3 1361 aa14.48□□□□□ -0.09
PVT1-208ENST00000519481 ARFGEF1Q9Y6D6 1849 aa14.48□□□□□ -0.09
PVT1-208ENST00000519481 KDM2BQ8NHM5 1336 aa14.48□□□□□ -0.09
PVT1-208ENST00000519481 NPHP1O15259 732 aa14.48□□□□□ -0.09
PVT1-208ENST00000519481 TOMM70O94826 608 aa14.48□□□□□ -0.09
PVT1-208ENST00000519481 C2CD5Q86YS7 1000 aa14.48□□□□□ -0.09
PVT1-208ENST00000519481 TTLL6Q8N841 843 aa14.48□□□□□ -0.09
PVT1-208ENST00000519481 PDZRN3Q9UPQ7 1066 aa14.48□□□□□ -0.09
PVT1-208ENST00000519481 TBC1D2BQ9UPU7 963 aa14.47□□□□□ -0.09
PVT1-208ENST00000519481 HTATSF1O43719 755 aaKnown RBP14.46□□□□□ -0.09
PVT1-208ENST00000519481 A1BGP04217 495 aa14.46□□□□□ -0.09
PVT1-208ENST00000519481 PDE6BP35913 854 aa14.46□□□□□ -0.09
PVT1-208ENST00000519481 TBC1D9BQ66K14 1250 aa14.46□□□□□ -0.09
PVT1-208ENST00000519481 POTEDQ86YR6 584 aa14.46□□□□□ -0.09
PVT1-208ENST00000519481 SETDB2Q96T68 719 aa14.46□□□□□ -0.09
PVT1-208ENST00000519481 SNRPA1P09661 255 aaKnown RBP14.45□□□□□ -0.1
PVT1-208ENST00000519481 MCM10Q7L590 875 aa14.45□□□□□ -0.1
PVT1-208ENST00000519481 NMRK2Q9NPI5 230 aa14.45□□□□□ -0.1
PVT1-208ENST00000519481 AFDNP55196 1824 aaKnown RBP14.45□□□□□ -0.1
PVT1-208ENST00000519481 CARMIL3Q8ND23 1372 aa14.45□□□□□ -0.1
PVT1-208ENST00000519481 KCNQ3O43525 872 aa14.44□□□□□ -0.1
PVT1-208ENST00000519481 DZIP3Q86Y13 1208 aaKnown RBP14.44□□□□□ -0.1
PVT1-208ENST00000519481 ZNF622Q969S3 477 aaKnown RBP eCLIP14.44□□□□□ -0.12e-7■■■■□ 24.3
PVT1-208ENST00000519481 BRIP1Q9BX63 1249 aa14.44□□□□□ -0.1
PVT1-208ENST00000519481 SIPA1L3O60292 1781 aaPredicted RBP14.44□□□□□ -0.1
PVT1-208ENST00000519481 NRXN2Q9P2S2 1712 aa14.44□□□□□ -0.1
PVT1-208ENST00000519481 ZC3H4Q9UPT8 1303 aaKnown RBP14.43□□□□□ -0.1
PVT1-208ENST00000519481 LMNB1P20700 586 aa14.43□□□□□ -0.1
PVT1-208ENST00000519481 APLP1P51693 650 aa14.43□□□□□ -0.1
PVT1-208ENST00000519481 ST5P78524 1137 aa14.43□□□□□ -0.1
PVT1-208ENST00000519481 CNBD1Q8NA66 436 aa14.43□□□□□ -0.1
PVT1-208ENST00000519481 PNNQ9H307 717 aaKnown RBP14.43□□□□□ -0.1
PVT1-208ENST00000519481 ZNF652Q9Y2D9 606 aa14.43□□□□□ -0.1
PVT1-208ENST00000519481 USP16Q9Y5T5 823 aa14.43□□□□□ -0.1
PVT1-208ENST00000519481 CEP350Q5VT06 3117 aa14.42□□□□□ -0.1
PVT1-208ENST00000519481 CAMTA2O94983 1202 aa14.42□□□□□ -0.1
PVT1-208ENST00000519481 RASSF7Q02833 373 aa14.42□□□□□ -0.1
PVT1-208ENST00000519481 TAF7Q15545 349 aaPredicted RBP14.42□□□□□ -0.1
PVT1-208ENST00000519481 PRR5LQ6MZQ0 368 aa14.42□□□□□ -0.1
PVT1-208ENST00000519481 RBM46Q8TBY0 533 aaKnown RBP14.42□□□□□ -0.1
PVT1-208ENST00000519481 DCTN1Q14203 1278 aa14.41□□□□□ -0.1
PVT1-208ENST00000519481 CLEC4GQ6UXB4 293 aa14.41□□□□□ -0.1
PVT1-208ENST00000519481 PNISRQ8TF01 805 aaKnown RBP14.41□□□□□ -0.1
PVT1-208ENST00000519481 SCN7AQ01118 1682 aa14.4□□□□□ -0.1
PVT1-208ENST00000519481 CNKSR1Q969H4 720 aa14.4□□□□□ -0.1
PVT1-208ENST00000519481 RRAGCQ9HB90 399 aa14.4□□□□□ -0.1
PVT1-208ENST00000519481 PIP4K2AP48426 406 aaPredicted RBP14.39□□□□□ -0.11
PVT1-208ENST00000519481 FSTL1Q12841 308 aa14.39□□□□□ -0.11
PVT1-208ENST00000519481 NBPF5PQ86XG9 351 aaPredicted RBP14.39□□□□□ -0.11
PVT1-208ENST00000519481 CCDC24Q8N4L8 307 aa14.39□□□□□ -0.11
PVT1-208ENST00000519481 MAPK8IP3Q9UPT6 1336 aa14.39□□□□□ -0.11
PVT1-208ENST00000519481 DLEC1Q9Y238 1755 aa14.38□□□□□ -0.11
PVT1-208ENST00000519481 PRAMEF22A3QJZ6 481 aa14.38□□□□□ -0.11
PVT1-208ENST00000519481 RGL2O15211 777 aa14.38□□□□□ -0.11
PVT1-208ENST00000519481 SOGA3Q5TF21 947 aa14.38□□□□□ -0.11
PVT1-208ENST00000519481 ZNF219Q9P2Y4 722 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms