RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 NFE2L2Q16236 605 aa9.36□□□□□ -0.91
MRPS28-205ENST00000519386 BCL11BQ9C0K0 894 aaPredicted RBP9.36□□□□□ -0.91
MRPS28-205ENST00000519386 SPG7Q9UQ90 795 aa9.36□□□□□ -0.91
MRPS28-205ENST00000519386 BCL9O00512 1426 aa9.35□□□□□ -0.91
MRPS28-205ENST00000519386 TRIM37O94972 964 aa9.35□□□□□ -0.91
MRPS28-205ENST00000519386 PRKAR2BP31323 418 aa9.35□□□□□ -0.91
MRPS28-205ENST00000519386 PLEKHO1Q53GL0 409 aaPredicted RBP9.35□□□□□ -0.91
MRPS28-205ENST00000519386 ZNF530Q6P9A1 599 aaPredicted RBP9.35□□□□□ -0.91
MRPS28-205ENST00000519386 ZNF428Q96B54 188 aa9.35□□□□□ -0.91
MRPS28-205ENST00000519386 TNS1Q9HBL0 1735 aaKnown RBP9.35□□□□□ -0.91
MRPS28-205ENST00000519386 ADAMTS7Q9UKP4 1686 aa9.35□□□□□ -0.91
MRPS28-205ENST00000519386 N4BP2Q86UW6 1770 aaPredicted RBP9.35□□□□□ -0.91
MRPS28-205ENST00000519386 DOT1LQ8TEK3 1739 aa9.34□□□□□ -0.91
MRPS28-205ENST00000519386 AAMPQ13685 434 aa9.34□□□□□ -0.91
MRPS28-205ENST00000519386 PTF1AQ7RTS3 328 aa9.34□□□□□ -0.91
MRPS28-205ENST00000519386 ACSBG1Q96GR2 724 aa9.34□□□□□ -0.91
MRPS28-205ENST00000519386 SCUBE2Q9NQ36 999 aa9.34□□□□□ -0.91
MRPS28-205ENST00000519386 TOGARAM1Q9Y4F4 1720 aa9.34□□□□□ -0.92
MRPS28-205ENST00000519386 NHSQ6T4R5 1651 aa9.33□□□□□ -0.92
MRPS28-205ENST00000519386 STK25O00506 426 aa9.33□□□□□ -0.92
MRPS28-205ENST00000519386 PHKG2P15735 406 aa9.33□□□□□ -0.92
MRPS28-205ENST00000519386 AMOTQ4VCS5 1084 aa9.33□□□□□ -0.92
MRPS28-205ENST00000519386 FANCIQ9NVI1 1328 aa9.32□□□□□ -0.92
MRPS28-205ENST00000519386 KCNQ2O43526 872 aa9.32□□□□□ -0.92
MRPS28-205ENST00000519386 RIPK4P57078 832 aa9.32□□□□□ -0.92
MRPS28-205ENST00000519386 PDE3AQ14432 1141 aa9.32□□□□□ -0.92
MRPS28-205ENST00000519386 NKX1-1Q15270 411 aaPredicted RBP9.32□□□□□ -0.92
MRPS28-205ENST00000519386 MTHFSDQ2M296 383 aaKnown RBP9.32□□□□□ -0.92
MRPS28-205ENST00000519386 C1orf141Q5JVX7 400 aa9.32□□□□□ -0.92
MRPS28-205ENST00000519386 IFNL2Q8IZJ0 200 aa9.32□□□□□ -0.92
MRPS28-205ENST00000519386 PHACTR3Q96KR7 559 aa9.32□□□□□ -0.92
MRPS28-205ENST00000519386 STK24Q9Y6E0 443 aa9.32□□□□□ -0.92
MRPS28-205ENST00000519386 ITGB4P16144 1822 aa9.32□□□□□ -0.92
MRPS28-205ENST00000519386 SIPA1L3O60292 1781 aaPredicted RBP9.32□□□□□ -0.92
MRPS28-205ENST00000519386 KDM3BQ7LBC6 1761 aa9.32□□□□□ -0.92
MRPS28-205ENST00000519386 BTAF1O14981 1849 aa9.31□□□□□ -0.92
MRPS28-205ENST00000519386 SENP3-EIF4A1A0A087X0R7 540 aa9.31□□□□□ -0.92
MRPS28-205ENST00000519386 SF3B2Q13435 895 aaKnown RBP9.31□□□□□ -0.92
MRPS28-205ENST00000519386 DEFB132Q7Z7B7 95 aa9.31□□□□□ -0.92
MRPS28-205ENST00000519386 CCDC125Q86Z20 511 aa9.31□□□□□ -0.92
MRPS28-205ENST00000519386 IFT57Q9NWB7 429 aa9.31□□□□□ -0.92
MRPS28-205ENST00000519386 RRP7AQ9Y3A4 280 aaKnown RBP9.31□□□□□ -0.92
MRPS28-205ENST00000519386 KDM6AO15550 1401 aaPredicted RBP9.31□□□□□ -0.92
MRPS28-205ENST00000519386 SCN11AQ9UI33 1791 aa9.3□□□□□ -0.92
MRPS28-205ENST00000519386 APBA3O96018 575 aa9.3□□□□□ -0.92
MRPS28-205ENST00000519386 PRIM1P49642 420 aaKnown RBP9.3□□□□□ -0.92
MRPS28-205ENST00000519386 GNAI1P63096 354 aa9.3□□□□□ -0.92
MRPS28-205ENST00000519386 IRX6P78412 446 aaPredicted RBP9.3□□□□□ -0.92
MRPS28-205ENST00000519386 NEUROD2Q15784 382 aa9.3□□□□□ -0.92
MRPS28-205ENST00000519386 DPY19L2Q6NUT2 758 aa9.3□□□□□ -0.92
MRPS28-205ENST00000519386 GAS2L2Q8NHY3 880 aa9.3□□□□□ -0.92
MRPS28-205ENST00000519386 SYTL4Q96C24 671 aaPredicted RBP9.3□□□□□ -0.92
MRPS28-205ENST00000519386 KIF16BQ96L93 1317 aa9.3□□□□□ -0.92
MRPS28-205ENST00000519386 MAP3K5Q99683 1374 aa9.29□□□□□ -0.92
MRPS28-205ENST00000519386 HTATSF1O43719 755 aaKnown RBP9.29□□□□□ -0.92
MRPS28-205ENST00000519386 HSP90AB1P08238 724 aaKnown RBP9.29□□□□□ -0.92
MRPS28-205ENST00000519386 ZNF853P0CG23 659 aa9.29□□□□□ -0.92
MRPS28-205ENST00000519386 MS4A1P11836 297 aa9.29□□□□□ -0.92
MRPS28-205ENST00000519386 BAG6P46379 1132 aa9.29□□□□□ -0.92
MRPS28-205ENST00000519386 BRPF1P55201 1214 aaPredicted RBP9.29□□□□□ -0.92
MRPS28-205ENST00000519386 ALDH1L2Q3SY69 923 aa9.29□□□□□ -0.92
MRPS28-205ENST00000519386 AKAP4Q5JQC9 854 aa9.29□□□□□ -0.92
MRPS28-205ENST00000519386 MPRIPQ6WCQ1 1025 aa9.29□□□□□ -0.92
MRPS28-205ENST00000519386 DCAF5Q96JK2 942 aa9.29□□□□□ -0.92
MRPS28-205ENST00000519386 RNMTO43148 476 aaKnown RBP9.28□□□□□ -0.92
MRPS28-205ENST00000519386 RARSP54136 660 aaKnown RBP9.28□□□□□ -0.92
MRPS28-205ENST00000519386 EN1Q05925 392 aaPredicted RBP9.28□□□□□ -0.92
MRPS28-205ENST00000519386 L3MBTL3Q96JM7 780 aaPredicted RBP9.28□□□□□ -0.92
MRPS28-205ENST00000519386 CCDC136Q96JN2 1154 aa9.28□□□□□ -0.92
MRPS28-205ENST00000519386 CFAP44Q96MT7 982 aa9.28□□□□□ -0.92
MRPS28-205ENST00000519386 LGR6Q9HBX8 967 aa9.28□□□□□ -0.92
MRPS28-205ENST00000519386 SOS1Q07889 1333 aaPredicted RBP9.28□□□□□ -0.92
MRPS28-205ENST00000519386 GNAT3A8MTJ3 354 aa9.27□□□□□ -0.93
MRPS28-205ENST00000519386 ERVV-2B6SEH9 535 aa9.27□□□□□ -0.93
MRPS28-205ENST00000519386 EZH2Q15910 746 aaKnown RBP9.27□□□□□ -0.93
MRPS28-205ENST00000519386 PIGBQ92521 554 aa9.27□□□□□ -0.93
MRPS28-205ENST00000519386 MS4A4AQ96JQ5 239 aa9.27□□□□□ -0.93
MRPS28-205ENST00000519386 CAMKK2Q96RR4 588 aa9.27□□□□□ -0.93
MRPS28-205ENST00000519386 TMOD3Q9NYL9 352 aa9.27□□□□□ -0.93
MRPS28-205ENST00000519386 RGPD3A6NKT7 1758 aaPredicted RBP9.27□□□□□ -0.93
MRPS28-205ENST00000519386 RGPD4Q7Z3J3 1758 aa9.27□□□□□ -0.93
MRPS28-205ENST00000519386 BABAM1Q9NWV8 329 aa9.26□□□□□ -0.93
MRPS28-205ENST00000519386 MRC1P22897 1456 aa9.26□□□□□ -0.93
MRPS28-205ENST00000519386 RREB1Q92766 1687 aa9.26□□□□□ -0.93
MRPS28-205ENST00000519386 PLSCR1O15162 318 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 CABP4P57796 275 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 DCTN1Q14203 1278 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 MCM10Q7L590 875 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 HS6ST3Q8IZP7 471 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 FBXO22Q8NEZ5 403 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 IL17REQ8NFR9 667 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 EXOC6Q8TAG9 804 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 MFRPQ9BY79 579 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 SLC52A2Q9HAB3 445 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 ASAP1Q9ULH1 1129 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 NUP188Q5SRE5 1749 aa9.25□□□□□ -0.93
MRPS28-205ENST00000519386 CEMIPQ8WUJ3 1361 aa9.24□□□□□ -0.93
MRPS28-205ENST00000519386 EXOSC9Q06265 439 aaKnown RBP9.24□□□□□ -0.93
MRPS28-205ENST00000519386 NFATC2IPQ8NCF5 419 aa9.24□□□□□ -0.93
MRPS28-205ENST00000519386 TSR2Q969E8 191 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms