RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 SCN4AP35499 1836 aa11.66□□□□□ -0.54
CTNNA1-215ENST00000519309 PPM1GO15355 546 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-215ENST00000519309 SLC34A2O95436 690 aa11.66□□□□□ -0.54
CTNNA1-215ENST00000519309 THSD7BQ9C0I4 1608 aa11.65□□□□□ -0.54
CTNNA1-215ENST00000519309 ADAMTSL1Q8N6G6 1762 aa11.65□□□□□ -0.54
CTNNA1-215ENST00000519309 NFKBIEO00221 500 aa11.65□□□□□ -0.54
CTNNA1-215ENST00000519309 AMOTQ4VCS5 1084 aa11.65□□□□□ -0.54
CTNNA1-215ENST00000519309 ZNF530Q6P9A1 599 aaPredicted RBP11.65□□□□□ -0.54
CTNNA1-215ENST00000519309 CACNA1SQ13698 1873 aa11.65□□□□□ -0.54
CTNNA1-215ENST00000519309 COL15A1P39059 1388 aa11.65□□□□□ -0.55
CTNNA1-215ENST00000519309 CARMIL3Q8ND23 1372 aa11.65□□□□□ -0.55
CTNNA1-215ENST00000519309 POTECB2RU33 542 aa11.64□□□□□ -0.55
CTNNA1-215ENST00000519309 CABP4P57796 275 aa11.64□□□□□ -0.55
CTNNA1-215ENST00000519309 PLEKHO1Q53GL0 409 aaPredicted RBP11.64□□□□□ -0.55
CTNNA1-215ENST00000519309 INTS5Q6P9B9 1019 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-215ENST00000519309 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
CTNNA1-215ENST00000519309 CNTNAP1P78357 1384 aa11.64□□□□□ -0.55
CTNNA1-215ENST00000519309 PTCD1O75127 700 aaKnown RBP11.63□□□□□ -0.55
CTNNA1-215ENST00000519309 BCORQ6W2J9 1755 aa11.63□□□□□ -0.55
CTNNA1-215ENST00000519309 LTBP3Q9NS15 1303 aa11.62□□□□□ -0.55
CTNNA1-215ENST00000519309 NFIXQ14938 502 aa11.62□□□□□ -0.55
CTNNA1-215ENST00000519309 USPL1Q5W0Q7 1092 aa11.62□□□□□ -0.55
CTNNA1-215ENST00000519309 TTLL6Q8N841 843 aa11.62□□□□□ -0.55
CTNNA1-215ENST00000519309 PRDM10Q9NQV6 1147 aa11.62□□□□□ -0.55
CTNNA1-215ENST00000519309 ZPR1O75312 459 aa11.61□□□□□ -0.55
CTNNA1-215ENST00000519309 NARFQ9UHQ1 456 aa11.61□□□□□ -0.55
CTNNA1-215ENST00000519309 SIPA1L3O60292 1781 aaPredicted RBP11.6□□□□□ -0.55
CTNNA1-215ENST00000519309 FOXN1O15353 648 aa11.6□□□□□ -0.55
CTNNA1-215ENST00000519309 MTHFSP49914 203 aa11.6□□□□□ -0.55
CTNNA1-215ENST00000519309 C1orf141Q5JVX7 400 aa11.6□□□□□ -0.55
CTNNA1-215ENST00000519309 NFATC2IPQ8NCF5 419 aa11.6□□□□□ -0.55
CTNNA1-215ENST00000519309 BCL2L12Q9HB09 334 aa11.6□□□□□ -0.55
CTNNA1-215ENST00000519309 PASKQ96RG2 1323 aa11.6□□□□□ -0.55
CTNNA1-215ENST00000519309 SLX4Q8IY92 1834 aa11.59□□□□□ -0.55
CTNNA1-215ENST00000519309 CYP19A1P11511 503 aaPredicted RBP11.59□□□□□ -0.55
CTNNA1-215ENST00000519309 CHADLQ6NUI6 762 aa11.59□□□□□ -0.55
CTNNA1-215ENST00000519309 DPY19L2Q6NUT2 758 aa11.59□□□□□ -0.55
CTNNA1-215ENST00000519309 DNAJC10Q8IXB1 793 aa11.59□□□□□ -0.55
CTNNA1-215ENST00000519309 SERPINB2P05120 415 aa11.58□□□□□ -0.56
CTNNA1-215ENST00000519309 C2CD5Q86YS7 1000 aa11.58□□□□□ -0.56
CTNNA1-215ENST00000519309 AEBP1Q8IUX7 1158 aa11.58□□□□□ -0.56
CTNNA1-215ENST00000519309 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-215ENST00000519309 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
CTNNA1-215ENST00000519309 ZBTB1Q9Y2K1 713 aa11.58□□□□□ -0.56
CTNNA1-215ENST00000519309 H0YIN7 160 aa11.57□□□□□ -0.56
CTNNA1-215ENST00000519309 CTCFP49711 727 aaPredicted RBP11.57□□□□□ -0.56
CTNNA1-215ENST00000519309 SLC52A2Q9HAB3 445 aa11.57□□□□□ -0.56
CTNNA1-215ENST00000519309 POTEIP0CG38 1075 aa11.56□□□□□ -0.56
CTNNA1-215ENST00000519309 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
CTNNA1-215ENST00000519309 ERFEQ4G0M1 354 aa11.56□□□□□ -0.56
CTNNA1-215ENST00000519309 VSIG10Q8N0Z9 540 aa11.56□□□□□ -0.56
CTNNA1-215ENST00000519309 L3MBTL3Q96JM7 780 aaPredicted RBP11.56□□□□□ -0.56
CTNNA1-215ENST00000519309 AKAP4Q5JQC9 854 aa11.55□□□□□ -0.56
CTNNA1-215ENST00000519309 LDHDQ86WU2 507 aa11.55□□□□□ -0.56
CTNNA1-215ENST00000519309 IQCA1LA6NCM1 817 aa11.54□□□□□ -0.56
CTNNA1-215ENST00000519309 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
CTNNA1-215ENST00000519309 AIDAQ96BJ3 306 aa11.54□□□□□ -0.56
CTNNA1-215ENST00000519309 BRIP1Q9BX63 1249 aa11.54□□□□□ -0.56
CTNNA1-215ENST00000519309 TAOK3Q9H2K8 898 aa11.54□□□□□ -0.56
CTNNA1-215ENST00000519309 WBP1LQ9NX94 342 aa11.54□□□□□ -0.56
CTNNA1-215ENST00000519309 LTBP1Q14766 1721 aa11.53□□□□□ -0.56
CTNNA1-215ENST00000519309 C21orf2O43822 256 aa11.53□□□□□ -0.56
CTNNA1-215ENST00000519309 PDE6BP35913 854 aa11.53□□□□□ -0.56
CTNNA1-215ENST00000519309 EIF5P55010 431 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-215ENST00000519309 SULT6B1Q6IMI4 303 aa11.53□□□□□ -0.56
CTNNA1-215ENST00000519309 TMEM88BA6NKF7 163 aa11.52□□□□□ -0.57
CTNNA1-215ENST00000519309 DDNO94850 711 aaPredicted RBP11.52□□□□□ -0.57
CTNNA1-215ENST00000519309 VEGFBP49765 207 aa11.52□□□□□ -0.57
CTNNA1-215ENST00000519309 SOGA3Q5TF21 947 aa11.52□□□□□ -0.57
CTNNA1-215ENST00000519309 PRR5LQ6MZQ0 368 aa11.52□□□□□ -0.57
CTNNA1-215ENST00000519309 TAF1DQ9H5J8 278 aaPredicted RBP11.52□□□□□ -0.57
CTNNA1-215ENST00000519309 TRPM7Q96QT4 1865 aa11.52□□□□□ -0.57
CTNNA1-215ENST00000519309 A0A087WZG4 1122 aa11.51□□□□□ -0.57
CTNNA1-215ENST00000519309 RASSF10A6NK89 507 aa11.51□□□□□ -0.57
CTNNA1-215ENST00000519309 RNMTO43148 476 aaKnown RBP11.51□□□□□ -0.57
CTNNA1-215ENST00000519309 ITGBL1O95965 494 aaPredicted RBP11.51□□□□□ -0.57
CTNNA1-215ENST00000519309 HSPA8P11142 646 aaKnown RBP11.51□□□□□ -0.57
CTNNA1-215ENST00000519309 IL13P35225 146 aa11.51□□□□□ -0.57
CTNNA1-215ENST00000519309 STYK1Q6J9G0 422 aa11.51□□□□□ -0.57
CTNNA1-215ENST00000519309 ABHD8Q96I13 439 aa11.51□□□□□ -0.57
CTNNA1-215ENST00000519309 SNED1Q8TER0 1413 aa11.51□□□□□ -0.57
CTNNA1-215ENST00000519309 LBX1P52954 281 aa11.5□□□□□ -0.57
CTNNA1-215ENST00000519309 SLC39A6Q13433 755 aa11.5□□□□□ -0.57
CTNNA1-215ENST00000519309 FAM161AQ3B820 660 aa11.5□□□□□ -0.57
CTNNA1-215ENST00000519309 TBC1D9BQ66K14 1250 aa11.5□□□□□ -0.57
CTNNA1-215ENST00000519309 PRPF40BQ6NWY9 871 aaKnown RBP11.5□□□□□ -0.57
CTNNA1-215ENST00000519309 CNKSR1Q969H4 720 aa11.5□□□□□ -0.57
CTNNA1-215ENST00000519309 ZNF622Q969S3 477 aaKnown RBP eCLIP11.5□□□□□ -0.57
CTNNA1-215ENST00000519309 LGR6Q9HBX8 967 aa11.5□□□□□ -0.57
CTNNA1-215ENST00000519309 PCDH10Q9P2E7 1040 aa11.5□□□□□ -0.57
CTNNA1-215ENST00000519309 CNBD1Q8NA66 436 aa11.49□□□□□ -0.57
CTNNA1-215ENST00000519309 HEG1Q9ULI3 1381 aa11.49□□□□□ -0.57
CTNNA1-215ENST00000519309 PDE4DIPQ5VU43 2346 aa11.49□□□□□ -0.57
CTNNA1-215ENST00000519309 STARD3NLO95772 234 aa11.48□□□□□ -0.57
CTNNA1-215ENST00000519309 SRGNP10124 158 aa11.48□□□□□ -0.57
CTNNA1-215ENST00000519309 CANXP27824 592 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-215ENST00000519309 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
CTNNA1-215ENST00000519309 BICDL1Q6ZP65 573 aa11.48□□□□□ -0.57
CTNNA1-215ENST00000519309 C7orf43Q8WVR3 580 aa11.48□□□□□ -0.57
CTNNA1-215ENST00000519309 ZNF219Q9P2Y4 722 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms