RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 LAMB4A4D0S4 1761 aa15.7■□□□□ 0.1
SPIDR-209ENST00000519141 FLIIQ13045 1269 aa15.7■□□□□ 0.1
SPIDR-209ENST00000519141 BARGINQ6ZT62 677 aa15.7■□□□□ 0.1
SPIDR-209ENST00000519141 G2E3Q7L622 706 aa15.7■□□□□ 0.1
SPIDR-209ENST00000519141 N4BP2Q86UW6 1770 aaPredicted RBP15.69■□□□□ 0.1
SPIDR-209ENST00000519141 CENPQQ7L2Z9 268 aaPredicted RBP15.69■□□□□ 0.1
SPIDR-209ENST00000519141 FMNL2Q96PY5 1086 aa15.69■□□□□ 0.1
SPIDR-209ENST00000519141 KDM2BQ8NHM5 1336 aa15.68■□□□□ 0.1
SPIDR-209ENST00000519141 DDB1Q16531 1140 aa15.68■□□□□ 0.1
SPIDR-209ENST00000519141 ZNF496Q96IT1 587 aaPredicted RBP15.68■□□□□ 0.1
SPIDR-209ENST00000519141 CHPF2Q9P2E5 772 aa15.68■□□□□ 0.1
SPIDR-209ENST00000519141 DOT1LQ8TEK3 1739 aa15.67■□□□□ 0.1
SPIDR-209ENST00000519141 THSD7AQ9UPZ6 1657 aa15.67■□□□□ 0.1
SPIDR-209ENST00000519141 FKBP5Q13451 457 aaPredicted RBP15.67■□□□□ 0.1
SPIDR-209ENST00000519141 INTS3Q68E01 1043 aaKnown RBP15.67■□□□□ 0.1
SPIDR-209ENST00000519141 TMOD3Q9NYL9 352 aa15.67■□□□□ 0.1
SPIDR-209ENST00000519141 DBF4Q9UBU7 674 aaPredicted RBP15.67■□□□□ 0.1
SPIDR-209ENST00000519141 ZBTB40Q9NUA8 1239 aa15.67■□□□□ 0.1
SPIDR-209ENST00000519141 KCPQ6ZWJ8 1503 aa15.66■□□□□ 0.1
SPIDR-209ENST00000519141 PXDNLA1KZ92 1463 aa15.66■□□□□ 0.1
SPIDR-209ENST00000519141 PRAMEF22A3QJZ6 481 aa15.66■□□□□ 0.1
SPIDR-209ENST00000519141 SNRPA1P09661 255 aaKnown RBP15.66■□□□□ 0.1
SPIDR-209ENST00000519141 KAT6BQ8WYB5 2073 aa15.65■□□□□ 0.1
SPIDR-209ENST00000519141 PCDHB15Q9Y5E8 787 aa15.65■□□□□ 0.1
SPIDR-209ENST00000519141 ZBTB7BO15156 539 aaPredicted RBP15.64■□□□□ 0.09
SPIDR-209ENST00000519141 CCT4P50991 539 aaKnown RBP15.64■□□□□ 0.09
SPIDR-209ENST00000519141 FAM182BQ5T319 152 aa15.64■□□□□ 0.09
SPIDR-209ENST00000519141 F6X3S4 739 aa15.63■□□□□ 0.09
SPIDR-209ENST00000519141 SLC4A10Q6U841 1118 aa15.63■□□□□ 0.09
SPIDR-209ENST00000519141 PHAXQ9H814 394 aaKnown RBP15.63■□□□□ 0.09
SPIDR-209ENST00000519141 HYPKQ9NX55 129 aa15.63■□□□□ 0.09
SPIDR-209ENST00000519141 RWDD1Q9H446 243 aaPredicted RBP15.63■□□□□ 0.09
SPIDR-209ENST00000519141 DDX21Q9NR30 783 aaKnown RBP eCLIP15.63■□□□□ 0.09
SPIDR-209ENST00000519141 BCL9O00512 1426 aa15.62■□□□□ 0.09
SPIDR-209ENST00000519141 ANXA1P04083 346 aa15.62■□□□□ 0.09
SPIDR-209ENST00000519141 DEFB132Q7Z7B7 95 aa15.62■□□□□ 0.09
SPIDR-209ENST00000519141 IGHDP01880 384 aa15.61■□□□□ 0.09
SPIDR-209ENST00000519141 PIGBQ92521 554 aa15.61■□□□□ 0.09
SPIDR-209ENST00000519141 PROSER3Q2NL68 480 aa15.6■□□□□ 0.09
SPIDR-209ENST00000519141 PTCD1O75127 700 aaKnown RBP15.6■□□□□ 0.09
SPIDR-209ENST00000519141 SF3B2Q13435 895 aaKnown RBP15.6■□□□□ 0.09
SPIDR-209ENST00000519141 MARCH10Q8NA82 808 aaPredicted RBP15.6■□□□□ 0.09
SPIDR-209ENST00000519141 SYTL4Q96C24 671 aaPredicted RBP15.6■□□□□ 0.09
SPIDR-209ENST00000519141 USP16Q9Y5T5 823 aa15.6■□□□□ 0.09
SPIDR-209ENST00000519141 ERBB4Q15303 1308 aa15.59■□□□□ 0.09
SPIDR-209ENST00000519141 HDAC1Q13547 482 aaPredicted RBP15.59■□□□□ 0.09
SPIDR-209ENST00000519141 PDIA6Q15084 440 aa15.59■□□□□ 0.09
SPIDR-209ENST00000519141 DDX58O95786 925 aaKnown RBP15.58■□□□□ 0.08
SPIDR-209ENST00000519141 DNAAF4Q8WXU2 420 aa15.58■□□□□ 0.08
SPIDR-209ENST00000519141 C1orf115Q9H7X2 142 aa15.58■□□□□ 0.08
SPIDR-209ENST00000519141 ASAP1Q9ULH1 1129 aa15.58■□□□□ 0.08
SPIDR-209ENST00000519141 ADCY9O60503 1353 aa15.58■□□□□ 0.08
SPIDR-209ENST00000519141 PI4KAP2A4QPH2 592 aa15.57■□□□□ 0.08
SPIDR-209ENST00000519141 MYL6BP14649 208 aa15.57■□□□□ 0.08
SPIDR-209ENST00000519141 PRIM1P49642 420 aaKnown RBP15.57■□□□□ 0.08
SPIDR-209ENST00000519141 PI4KAP1Q8N8J0 262 aa15.57■□□□□ 0.08
SPIDR-209ENST00000519141 ATG3Q9NT62 314 aa15.57■□□□□ 0.08
SPIDR-209ENST00000519141 ATP10DQ9P241 1426 aa15.57■□□□□ 0.08
SPIDR-209ENST00000519141 FAM196AQ6ZSG2 479 aa15.57■□□□□ 0.08
SPIDR-209ENST00000519141 MEIS3Q99687 375 aa15.57■□□□□ 0.08
SPIDR-209ENST00000519141 KSR2Q6VAB6 950 aa15.56■□□□□ 0.08
SPIDR-209ENST00000519141 VSIG10Q8N0Z9 540 aa15.56■□□□□ 0.08
SPIDR-209ENST00000519141 SRCIN1Q9C0H9 1055 aa15.56■□□□□ 0.08
SPIDR-209ENST00000519141 TEX13AQ9BXU3 409 aaPredicted RBP15.55■□□□□ 0.08
SPIDR-209ENST00000519141 MAP3K2Q9Y2U5 619 aa15.55■□□□□ 0.08
SPIDR-209ENST00000519141 GNAI3P08754 354 aa15.54■□□□□ 0.08
SPIDR-209ENST00000519141 BAG6P46379 1132 aa15.54■□□□□ 0.08
SPIDR-209ENST00000519141 AIMP1Q12904 312 aaKnown RBP15.54■□□□□ 0.08
SPIDR-209ENST00000519141 XAGE3Q8WTP9 111 aa15.54■□□□□ 0.08
SPIDR-209ENST00000519141 ACSBG1Q96GR2 724 aa15.54■□□□□ 0.08
SPIDR-209ENST00000519141 RBM42Q9BTD8 480 aaKnown RBP15.54■□□□□ 0.08
SPIDR-209ENST00000519141 ARFGEF2Q9Y6D5 1785 aa15.54■□□□□ 0.08
SPIDR-209ENST00000519141 TRIM37O94972 964 aa15.54■□□□□ 0.08
SPIDR-209ENST00000519141 BEND3Q5T5X7 828 aa15.54■□□□□ 0.08
SPIDR-209ENST00000519141 TJP1Q07157 1748 aa15.53■□□□□ 0.08
SPIDR-209ENST00000519141 PIP4K2AP48426 406 aaPredicted RBP15.53■□□□□ 0.08
SPIDR-209ENST00000519141 COPS6Q7L5N1 327 aa15.53■□□□□ 0.08
SPIDR-209ENST00000519141 LRP10Q7Z4F1 713 aa15.53■□□□□ 0.08
SPIDR-209ENST00000519141 RIC3Q7Z5B4 369 aa15.53■□□□□ 0.08
SPIDR-209ENST00000519141 GNAI2P04899 355 aa15.52■□□□□ 0.08
SPIDR-209ENST00000519141 EN1Q05925 392 aaPredicted RBP15.52■□□□□ 0.08
SPIDR-209ENST00000519141 NBPF26B4DH59 902 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 ALDH1L1O75891 902 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 STARD3NLO95772 234 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 UBTFL1P0CB47 393 aaPredicted RBP15.51■□□□□ 0.07
SPIDR-209ENST00000519141 NBPF14Q5TI25 921 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 NBPF10Q6P3W6 841 aaKnown RBP15.51■□□□□ 0.07
SPIDR-209ENST00000519141 DNAJC10Q8IXB1 793 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 RPAP2Q8IXW5 612 aaPredicted RBP15.51■□□□□ 0.07
SPIDR-209ENST00000519141 SMC5Q8IY18 1101 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 NBPF15Q8N660 670 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 ANKRD44Q8N8A2 993 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 NUP188Q5SRE5 1749 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 TNS1Q9HBL0 1735 aaKnown RBP15.51■□□□□ 0.07
SPIDR-209ENST00000519141 CICQ96RK0 1608 aaPredicted RBP15.51■□□□□ 0.07
SPIDR-209ENST00000519141 A1BGP04217 495 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 CEP85Q6P2H3 762 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 SKAP1Q86WV1 359 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 SIRT2Q8IXJ6 389 aa15.51■□□□□ 0.07
SPIDR-209ENST00000519141 LINS1Q8NG48 757 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms