RNA–Protein interactions for RNA: ENST00000519138.1

MCM4-206, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-206ENST00000519138 C10orf71Q711Q0 1435 aa16.78■□□□□ 0.28
MCM4-206ENST00000519138 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.28
MCM4-206ENST00000519138 ZNF790Q6PG37 636 aa16.77■□□□□ 0.28
MCM4-206ENST00000519138 PARP3Q9Y6F1 533 aa16.77■□□□□ 0.28
MCM4-206ENST00000519138 COL15A1P39059 1388 aa16.77■□□□□ 0.27
MCM4-206ENST00000519138 PRAMEF22A3QJZ6 481 aa16.76■□□□□ 0.27
MCM4-206ENST00000519138 PIP4K2AP48426 406 aaPredicted RBP16.76■□□□□ 0.27
MCM4-206ENST00000519138 CEMIPQ8WUJ3 1361 aa16.76■□□□□ 0.27
MCM4-206ENST00000519138 BTBD11A6QL63 1104 aa16.75■□□□□ 0.27
MCM4-206ENST00000519138 GRIN3BO60391 1043 aa16.75■□□□□ 0.27
MCM4-206ENST00000519138 DPEP1P16444 411 aa16.75■□□□□ 0.27
MCM4-206ENST00000519138 ZNF330Q9Y3S2 320 aaPredicted RBP16.75■□□□□ 0.27
MCM4-206ENST00000519138 HEG1Q9ULI3 1381 aa16.75■□□□□ 0.27
MCM4-206ENST00000519138 ZPR1O75312 459 aa16.74■□□□□ 0.27
MCM4-206ENST00000519138 A1BGP04217 495 aa16.74■□□□□ 0.27
MCM4-206ENST00000519138 BCL2L12Q9HB09 334 aa16.74■□□□□ 0.27
MCM4-206ENST00000519138 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
MCM4-206ENST00000519138 POLRMTO00411 1230 aaKnown RBP16.73■□□□□ 0.27
MCM4-206ENST00000519138 FCHSD2O94868 740 aa16.73■□□□□ 0.27
MCM4-206ENST00000519138 BCS1LQ9Y276 419 aa16.73■□□□□ 0.27
MCM4-206ENST00000519138 TM4SF1P30408 202 aa16.72■□□□□ 0.27
MCM4-206ENST00000519138 CHRNA5P30532 468 aa16.72■□□□□ 0.27
MCM4-206ENST00000519138 NFIXQ14938 502 aa16.72■□□□□ 0.27
MCM4-206ENST00000519138 BICDL1Q6ZP65 573 aa16.72■□□□□ 0.27
MCM4-206ENST00000519138 VSIG10Q8N0Z9 540 aa16.72■□□□□ 0.27
MCM4-206ENST00000519138 THUMPD2Q9BTF0 503 aaKnown RBP16.72■□□□□ 0.27
MCM4-206ENST00000519138 KCNA3P22001 575 aa16.71■□□□□ 0.27
MCM4-206ENST00000519138 ZNF526Q8TF50 670 aaPredicted RBP16.71■□□□□ 0.27
MCM4-206ENST00000519138 RTF1Q92541 710 aaKnown RBP16.71■□□□□ 0.27
MCM4-206ENST00000519138 FMNL2Q96PY5 1086 aa16.71■□□□□ 0.27
MCM4-206ENST00000519138 NARFQ9UHQ1 456 aa16.71■□□□□ 0.27
MCM4-206ENST00000519138 USP16Q9Y5T5 823 aa16.71■□□□□ 0.27
MCM4-206ENST00000519138 SCN7AQ01118 1682 aa16.71■□□□□ 0.27
MCM4-206ENST00000519138 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
MCM4-206ENST00000519138 STARD3NLO95772 234 aa16.7■□□□□ 0.26
MCM4-206ENST00000519138 PLEKHF1Q96S99 279 aa16.7■□□□□ 0.26
MCM4-206ENST00000519138 TBC1D2BQ9UPU7 963 aa16.7■□□□□ 0.26
MCM4-206ENST00000519138 ARFGEF1Q9Y6D6 1849 aa16.7■□□□□ 0.26
MCM4-206ENST00000519138 ATP10DQ9P241 1426 aa16.7■□□□□ 0.26
MCM4-206ENST00000519138 EIF5P55010 431 aaKnown RBP16.69■□□□□ 0.26
MCM4-206ENST00000519138 TGFB2P61812 414 aa16.69■□□□□ 0.26
MCM4-206ENST00000519138 CCDC24Q8N4L8 307 aa16.69■□□□□ 0.26
MCM4-206ENST00000519138 ANKRD31Q8N7Z5 1873 aa16.69■□□□□ 0.26
MCM4-206ENST00000519138 BCORQ6W2J9 1755 aa16.69■□□□□ 0.26
MCM4-206ENST00000519138 KDM3BQ7LBC6 1761 aa16.69■□□□□ 0.26
MCM4-206ENST00000519138 CARMIL3Q8ND23 1372 aa16.68■□□□□ 0.26
MCM4-206ENST00000519138 CACNA1SQ13698 1873 aa16.68■□□□□ 0.26
MCM4-206ENST00000519138 TBC1D9BQ66K14 1250 aa16.67■□□□□ 0.26
MCM4-206ENST00000519138 ARHGAP27Q6ZUM4 889 aa16.66■□□□□ 0.26
MCM4-206ENST00000519138 LAMB4A4D0S4 1761 aa16.65■□□□□ 0.26
MCM4-206ENST00000519138 DLEC1Q9Y238 1755 aa16.65■□□□□ 0.26
MCM4-206ENST00000519138 SERPINB2P05120 415 aa16.65■□□□□ 0.26
MCM4-206ENST00000519138 SBF1O95248 1867 aa16.65■□□□□ 0.26
MCM4-206ENST00000519138 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
MCM4-206ENST00000519138 COL11A2P13942 1736 aaPredicted RBP16.65■□□□□ 0.26
MCM4-206ENST00000519138 ADCY9O60503 1353 aa16.64■□□□□ 0.26
MCM4-206ENST00000519138 TAF7Q15545 349 aaPredicted RBP16.64■□□□□ 0.25
MCM4-206ENST00000519138 NFE2L2Q16236 605 aa16.64■□□□□ 0.25
MCM4-206ENST00000519138 CCDC146Q8IYE0 955 aa16.64■□□□□ 0.25
MCM4-206ENST00000519138 TEX13AQ9BXU3 409 aaPredicted RBP16.64■□□□□ 0.25
MCM4-206ENST00000519138 NBPF26B4DH59 902 aa16.63■□□□□ 0.25
MCM4-206ENST00000519138 GIGYF1O75420 1035 aaPredicted RBP16.63■□□□□ 0.25
MCM4-206ENST00000519138 CAMTA2O94983 1202 aa16.63■□□□□ 0.25
MCM4-206ENST00000519138 RALBP1Q15311 655 aa16.63■□□□□ 0.25
MCM4-206ENST00000519138 NBPF10Q6P3W6 841 aaKnown RBP16.63■□□□□ 0.25
MCM4-206ENST00000519138 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
MCM4-206ENST00000519138 RRP7AQ9Y3A4 280 aaKnown RBP16.63■□□□□ 0.25
MCM4-206ENST00000519138 A0A087WZG4 1122 aa16.62■□□□□ 0.25
MCM4-206ENST00000519138 HTATSF1O43719 755 aaKnown RBP16.62■□□□□ 0.25
MCM4-206ENST00000519138 NEFMP07197 916 aa16.62■□□□□ 0.25
MCM4-206ENST00000519138 SNRPA1P09661 255 aaKnown RBP16.62■□□□□ 0.25
MCM4-206ENST00000519138 IL6STP40189 918 aaPredicted RBP16.62■□□□□ 0.25
MCM4-206ENST00000519138 C1QTNF8P60827 252 aa16.62■□□□□ 0.25
MCM4-206ENST00000519138 PIM2Q9P1W9 311 aa16.62■□□□□ 0.25
MCM4-206ENST00000519138 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
MCM4-206ENST00000519138 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
MCM4-206ENST00000519138 DZIP3Q86Y13 1208 aaKnown RBP16.61■□□□□ 0.25
MCM4-206ENST00000519138 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
MCM4-206ENST00000519138 C2CD5Q86YS7 1000 aa16.6■□□□□ 0.25
MCM4-206ENST00000519138 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
MCM4-206ENST00000519138 RASSF7Q02833 373 aa16.59■□□□□ 0.25
MCM4-206ENST00000519138 NEUROD2Q15784 382 aa16.59■□□□□ 0.25
MCM4-206ENST00000519138 GPBP1L1Q9HC44 474 aaPredicted RBP16.59■□□□□ 0.25
MCM4-206ENST00000519138 NUP98P52948 1817 aa16.59■□□□□ 0.25
MCM4-206ENST00000519138 FAM177BA6PVY3 158 aa16.58■□□□□ 0.24
MCM4-206ENST00000519138 RIPK4P57078 832 aa16.58■□□□□ 0.24
MCM4-206ENST00000519138 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.24
MCM4-206ENST00000519138 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
MCM4-206ENST00000519138 SENP3-EIF4A1A0A087X0R7 540 aa16.57■□□□□ 0.24
MCM4-206ENST00000519138 EIF4A1P60842 406 aaKnown RBP16.57■□□□□ 0.24
MCM4-206ENST00000519138 C9orf131Q5VYM1 1079 aa16.57■□□□□ 0.24
MCM4-206ENST00000519138 NPM2Q86SE8 214 aaKnown RBP16.57■□□□□ 0.24
MCM4-206ENST00000519138 SLX4Q8IY92 1834 aa16.56■□□□□ 0.24
MCM4-206ENST00000519138 TMPOP42166 694 aaKnown RBP16.56■□□□□ 0.24
MCM4-206ENST00000519138 PRELPP51888 382 aa16.56■□□□□ 0.24
MCM4-206ENST00000519138 HLFQ16534 295 aa16.56■□□□□ 0.24
MCM4-206ENST00000519138 SETDB2Q96T68 719 aa16.56■□□□□ 0.24
MCM4-206ENST00000519138 MYL6BP14649 208 aa16.55■□□□□ 0.24
MCM4-206ENST00000519138 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.24
MCM4-206ENST00000519138 TSPYL4Q9UJ04 414 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms