RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 ARSJQ5FYB0 599 aaPredicted RBP6.91□□□□□ -1.3
PCM1-208ENST00000518877 NLRP8Q86W28 1048 aa6.91□□□□□ -1.3
PCM1-208ENST00000518877 NIFKQ9BYG3 293 aaKnown RBP6.91□□□□□ -1.3
PCM1-208ENST00000518877 TBC1D2BQ9UPU7 963 aa6.91□□□□□ -1.3
PCM1-208ENST00000518877 KHNYNO15037 678 aaKnown RBP6.9□□□□□ -1.3
PCM1-208ENST00000518877 CD33P20138 364 aa6.9□□□□□ -1.3
PCM1-208ENST00000518877 ATP4AP20648 1035 aa6.9□□□□□ -1.3
PCM1-208ENST00000518877 ADH6P28332 368 aa6.9□□□□□ -1.3
PCM1-208ENST00000518877 NBPF1Q3BBV0 1214 aa6.9□□□□□ -1.3
PCM1-208ENST00000518877 PHTF2Q8N3S3 785 aa6.9□□□□□ -1.3
PCM1-208ENST00000518877 DNAAF2Q9NVR5 837 aaKnown RBP6.9□□□□□ -1.3
PCM1-208ENST00000518877 GJA3Q9Y6H8 435 aa6.9□□□□□ -1.3
PCM1-208ENST00000518877 A0A1W2PNR3 127 aa6.89□□□□□ -1.31
PCM1-208ENST00000518877 INHAP05111 366 aa6.89□□□□□ -1.31
PCM1-208ENST00000518877 MAPTP10636 758 aaKnown RBP6.88□□□□□ -1.31
PCM1-208ENST00000518877 TATP17735 454 aaPredicted RBP6.88□□□□□ -1.31
PCM1-208ENST00000518877 SCNN1DP51172 638 aa6.88□□□□□ -1.31
PCM1-208ENST00000518877 SMTNP53814 917 aa6.88□□□□□ -1.31
PCM1-208ENST00000518877 DOC2BQ14184 412 aa6.88□□□□□ -1.31
PCM1-208ENST00000518877 SEMA6BQ9H3T3 888 aa6.88□□□□□ -1.31
PCM1-208ENST00000518877 SERTAD1Q9UHV2 236 aa6.88□□□□□ -1.31
PCM1-208ENST00000518877 TNP2Q05952 138 aa6.87□□□□□ -1.31
PCM1-208ENST00000518877 VAC14Q08AM6 782 aa6.87□□□□□ -1.31
PCM1-208ENST00000518877 FCHSD1Q86WN1 690 aa6.87□□□□□ -1.31
PCM1-208ENST00000518877 AVENQ9NQS1 362 aaPredicted RBP6.87□□□□□ -1.31
PCM1-208ENST00000518877 PRR12Q9ULL5 1215 aa6.87□□□□□ -1.31
PCM1-208ENST00000518877 BRPF1P55201 1214 aaPredicted RBP6.86□□□□□ -1.31
PCM1-208ENST00000518877 PCBP4P57723 403 aaKnown RBP6.86□□□□□ -1.31
PCM1-208ENST00000518877 FAM182BQ5T319 152 aa6.86□□□□□ -1.31
PCM1-208ENST00000518877 CABP1Q9NZU7 370 aa6.86□□□□□ -1.31
PCM1-208ENST00000518877 MAP7D1Q3KQU3 841 aa6.85□□□□□ -1.31
PCM1-208ENST00000518877 BICDL1Q6ZP65 573 aa6.85□□□□□ -1.31
PCM1-208ENST00000518877 PLPP7Q8NBV4 271 aa6.85□□□□□ -1.31
PCM1-208ENST00000518877 PLVAPQ9BX97 442 aa6.85□□□□□ -1.31
PCM1-208ENST00000518877 KLF15Q9UIH9 416 aa6.85□□□□□ -1.31
PCM1-208ENST00000518877 A6NJY4 79 aa6.84□□□□□ -1.31
PCM1-208ENST00000518877 GATA4P43694 442 aa6.84□□□□□ -1.31
PCM1-208ENST00000518877 IRF5Q13568 498 aa6.84□□□□□ -1.31
PCM1-208ENST00000518877 ZIC5Q96T25 663 aa6.84□□□□□ -1.31
PCM1-208ENST00000518877 ZDHHC3Q9NYG2 299 aa6.84□□□□□ -1.31
PCM1-208ENST00000518877 MARK1Q9P0L2 795 aa6.84□□□□□ -1.31
PCM1-208ENST00000518877 FAM157BP0CG42 384 aa6.83□□□□□ -1.32
PCM1-208ENST00000518877 SPATA31C1P0DKV0 1188 aa6.83□□□□□ -1.32
PCM1-208ENST00000518877 ALAS2P22557 587 aa6.83□□□□□ -1.32
PCM1-208ENST00000518877 SEMA3FQ13275 785 aa6.83□□□□□ -1.32
PCM1-208ENST00000518877 ZMYM1Q5SVZ6 1142 aa6.83□□□□□ -1.32
PCM1-208ENST00000518877 ZNF468Q5VIY5 522 aaPredicted RBP6.83□□□□□ -1.32
PCM1-208ENST00000518877 TRIM11Q96F44 468 aa6.83□□□□□ -1.32
PCM1-208ENST00000518877 CHIC2Q9UKJ5 165 aa6.83□□□□□ -1.32
PCM1-208ENST00000518877 HCN2Q9UL51 889 aa6.83□□□□□ -1.32
PCM1-208ENST00000518877 SPDYE3A6NKU9 549 aa6.82□□□□□ -1.32
PCM1-208ENST00000518877 TMEM229AB2RXF0 380 aa6.82□□□□□ -1.32
PCM1-208ENST00000518877 CDK2AP1O14519 115 aa6.82□□□□□ -1.32
PCM1-208ENST00000518877 ABL2P42684 1182 aa6.82□□□□□ -1.32
PCM1-208ENST00000518877 PARP3Q9Y6F1 533 aa6.82□□□□□ -1.32
PCM1-208ENST00000518877 ITGB7P26010 798 aa6.81□□□□□ -1.32
PCM1-208ENST00000518877 PRRT3Q5FWE3 981 aa6.81□□□□□ -1.32
PCM1-208ENST00000518877 PSMG3-AS1Q96PY0 264 aa6.81□□□□□ -1.32
PCM1-208ENST00000518877 KRTAP4-8Q9BYQ9 185 aa6.81□□□□□ -1.32
PCM1-208ENST00000518877 GDPD2Q9HCC8 539 aa6.81□□□□□ -1.32
PCM1-208ENST00000518877 STRN4Q9NRL3 753 aa6.81□□□□□ -1.32
PCM1-208ENST00000518877 USP3Q9Y6I4 520 aa6.81□□□□□ -1.32
PCM1-208ENST00000518877 ELOA3CA0A087WX78 387 aaPredicted RBP6.8□□□□□ -1.32
PCM1-208ENST00000518877 SCO2A0A1W2PP80 73 aa6.8□□□□□ -1.32
PCM1-208ENST00000518877 ELOA3DA6NLF2 546 aaPredicted RBP6.8□□□□□ -1.32
PCM1-208ENST00000518877 APBA3O96018 575 aa6.8□□□□□ -1.32
PCM1-208ENST00000518877 MTFR1Q15390 333 aa6.8□□□□□ -1.32
PCM1-208ENST00000518877 WASHC4Q2M389 1173 aa6.8□□□□□ -1.32
PCM1-208ENST00000518877 ELOA3BQ3SY89 546 aa6.8□□□□□ -1.32
PCM1-208ENST00000518877 SYT9Q86SS6 491 aa6.8□□□□□ -1.32
PCM1-208ENST00000518877 ELOA3Q8NG57 546 aa6.8□□□□□ -1.32
PCM1-208ENST00000518877 SLC4A9Q96Q91 983 aa6.8□□□□□ -1.32
PCM1-208ENST00000518877 NEUROD4Q9HD90 331 aa6.8□□□□□ -1.32
PCM1-208ENST00000518877 IQSEC3Q9UPP2 1182 aaPredicted RBP6.8□□□□□ -1.32
PCM1-208ENST00000518877 BACH1O14867 736 aa6.79□□□□□ -1.32
PCM1-208ENST00000518877 TXLNAP40222 546 aa6.79□□□□□ -1.32
PCM1-208ENST00000518877 PSME1Q06323 249 aa6.79□□□□□ -1.32
PCM1-208ENST00000518877 LAMC2Q13753 1193 aa6.79□□□□□ -1.32
PCM1-208ENST00000518877 SAMD5Q5TGI4 173 aa6.79□□□□□ -1.32
PCM1-208ENST00000518877 EML3Q32P44 896 aa6.78□□□□□ -1.32
PCM1-208ENST00000518877 LRRC69Q6ZNQ3 347 aa6.78□□□□□ -1.32
PCM1-208ENST00000518877 ZNF295-AS1Q8N0V1 137 aa6.78□□□□□ -1.32
PCM1-208ENST00000518877 FAM229AH3BQW9 127 aa6.77□□□□□ -1.33
PCM1-208ENST00000518877 EFSO43281 561 aa6.77□□□□□ -1.33
PCM1-208ENST00000518877 SOX11P35716 441 aa6.77□□□□□ -1.33
PCM1-208ENST00000518877 M0R082 166 aa6.76□□□□□ -1.33
PCM1-208ENST00000518877 RSPO4Q2I0M5 234 aaPredicted RBP6.76□□□□□ -1.33
PCM1-208ENST00000518877 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
PCM1-208ENST00000518877 ZNF417Q8TAU3 575 aa6.76□□□□□ -1.33
PCM1-208ENST00000518877 L3MBTL2Q969R5 705 aa6.76□□□□□ -1.33
PCM1-208ENST00000518877 ZNF587Q96SQ5 575 aaPredicted RBP6.76□□□□□ -1.33
PCM1-208ENST00000518877 ZNF232Q9UNY5 417 aa6.76□□□□□ -1.33
PCM1-208ENST00000518877 NOD1Q9Y239 953 aa6.76□□□□□ -1.33
PCM1-208ENST00000518877 PCDHGA11Q9Y5H2 935 aa6.76□□□□□ -1.33
PCM1-208ENST00000518877 PIK3CDO00329 1044 aa6.75□□□□□ -1.33
PCM1-208ENST00000518877 SIN3BO75182 1162 aa6.75□□□□□ -1.33
PCM1-208ENST00000518877 SKIP12755 728 aa6.75□□□□□ -1.33
PCM1-208ENST00000518877 NOS2P35228 1153 aa6.75□□□□□ -1.33
PCM1-208ENST00000518877 TRIM28Q13263 835 aaKnown RBP6.75□□□□□ -1.33
PCM1-208ENST00000518877 ZDHHC1Q8WTX9 485 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms