RNA–Protein interactions for RNA: ENST00000518842.1

LAMA4-211, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 480 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-211ENST00000518842 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
LAMA4-211ENST00000518842 LY75O60449 1722 aa12.25□□□□□ -0.45
LAMA4-211ENST00000518842 TOGARAM1Q9Y4F4 1720 aa12.25□□□□□ -0.45
LAMA4-211ENST00000518842 MAP2P11137 1827 aaKnown RBP12.25□□□□□ -0.45
LAMA4-211ENST00000518842 CCNL1Q9UK58 526 aaPredicted RBP12.25□□□□□ -0.45
LAMA4-211ENST00000518842 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
LAMA4-211ENST00000518842 NPC1L1Q9UHC9 1359 aa12.25□□□□□ -0.45
LAMA4-211ENST00000518842 IL13P35225 146 aa12.24□□□□□ -0.45
LAMA4-211ENST00000518842 KDRP35968 1356 aa12.24□□□□□ -0.45
LAMA4-211ENST00000518842 IFNL2Q8IZJ0 200 aa12.24□□□□□ -0.45
LAMA4-211ENST00000518842 PIGBQ92521 554 aa12.24□□□□□ -0.45
LAMA4-211ENST00000518842 PPP1R1BQ9UD71 204 aaPredicted RBP12.24□□□□□ -0.45
LAMA4-211ENST00000518842 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
LAMA4-211ENST00000518842 RIOK3O14730 519 aaKnown RBP12.23□□□□□ -0.45
LAMA4-211ENST00000518842 MPRIPQ6WCQ1 1025 aa12.23□□□□□ -0.45
LAMA4-211ENST00000518842 SLC16A10Q8TF71 515 aa12.23□□□□□ -0.45
LAMA4-211ENST00000518842 AEBP1Q8IUX7 1158 aa12.22□□□□□ -0.45
LAMA4-211ENST00000518842 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
LAMA4-211ENST00000518842 QSER1Q2KHR3 1735 aa12.22□□□□□ -0.45
LAMA4-211ENST00000518842 TFCP2L1Q9NZI6 479 aa12.21□□□□□ -0.45
LAMA4-211ENST00000518842 KDM6AO15550 1401 aaPredicted RBP12.2□□□□□ -0.46
LAMA4-211ENST00000518842 MTHFSP49914 203 aa12.2□□□□□ -0.46
LAMA4-211ENST00000518842 AMOTQ4VCS5 1084 aa12.2□□□□□ -0.46
LAMA4-211ENST00000518842 VARS2Q5ST30 1063 aaKnown RBP12.2□□□□□ -0.46
LAMA4-211ENST00000518842 COL24A1Q17RW2 1714 aa12.2□□□□□ -0.46
LAMA4-211ENST00000518842 ERVV-2B6SEH9 535 aa12.19□□□□□ -0.46
LAMA4-211ENST00000518842 PLEKHO1Q53GL0 409 aaPredicted RBP12.19□□□□□ -0.46
LAMA4-211ENST00000518842 COL23A1Q86Y22 540 aaPredicted RBP12.19□□□□□ -0.46
LAMA4-211ENST00000518842 ARXQ96QS3 562 aa12.19□□□□□ -0.46
LAMA4-211ENST00000518842 SYT17Q9BSW7 474 aa12.19□□□□□ -0.46
LAMA4-211ENST00000518842 FHDC1Q9C0D6 1143 aaPredicted RBP12.19□□□□□ -0.46
LAMA4-211ENST00000518842 TMOD3Q9NYL9 352 aa12.19□□□□□ -0.46
LAMA4-211ENST00000518842 ASAP1Q9ULH1 1129 aa12.19□□□□□ -0.46
LAMA4-211ENST00000518842 COL3A1P02461 1466 aaPredicted RBP12.19□□□□□ -0.46
LAMA4-211ENST00000518842 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
LAMA4-211ENST00000518842 LOC102724428A0A0B4J2F2 783 aa12.18□□□□□ -0.46
LAMA4-211ENST00000518842 HSP90AB1P08238 724 aaKnown RBP12.18□□□□□ -0.46
LAMA4-211ENST00000518842 HMGB2P26583 209 aaKnown RBP12.18□□□□□ -0.46
LAMA4-211ENST00000518842 SIK1P57059 783 aa12.18□□□□□ -0.46
LAMA4-211ENST00000518842 CC2D1BQ5T0F9 858 aaKnown RBP12.18□□□□□ -0.46
LAMA4-211ENST00000518842 SULT6B1Q6IMI4 303 aa12.18□□□□□ -0.46
LAMA4-211ENST00000518842 ZNF530Q6P9A1 599 aaPredicted RBP12.18□□□□□ -0.46
LAMA4-211ENST00000518842 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
LAMA4-211ENST00000518842 DCAF5Q96JK2 942 aa12.18□□□□□ -0.46
LAMA4-211ENST00000518842 ATG3Q9NT62 314 aa12.18□□□□□ -0.46
LAMA4-211ENST00000518842 TUBGCP6Q96RT7 1819 aa12.18□□□□□ -0.46
LAMA4-211ENST00000518842 ITPK1Q13572 414 aa12.17□□□□□ -0.46
LAMA4-211ENST00000518842 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
LAMA4-211ENST00000518842 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
LAMA4-211ENST00000518842 RNF166Q96A37 237 aaPredicted RBP12.17□□□□□ -0.46
LAMA4-211ENST00000518842 C5P01031 1676 aa12.16□□□□□ -0.46
LAMA4-211ENST00000518842 ITGB4P16144 1822 aa12.16□□□□□ -0.46
LAMA4-211ENST00000518842 LINC00116Q8NCU8 138 aa12.16□□□□□ -0.46
LAMA4-211ENST00000518842 SLC4A9Q96Q91 983 aa12.16□□□□□ -0.46
LAMA4-211ENST00000518842 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.46
LAMA4-211ENST00000518842 GPR153Q6NV75 609 aa12.15□□□□□ -0.46
LAMA4-211ENST00000518842 FLAD1Q8NFF5 587 aa12.15□□□□□ -0.46
LAMA4-211ENST00000518842 ZFP91Q96JP5 570 aaPredicted RBP12.15□□□□□ -0.46
LAMA4-211ENST00000518842 C4BP0C0L5 1744 aa12.14□□□□□ -0.47
LAMA4-211ENST00000518842 DIAPH1O60610 1272 aaKnown RBP12.14□□□□□ -0.47
LAMA4-211ENST00000518842 POLD1P28340 1107 aa12.14□□□□□ -0.47
LAMA4-211ENST00000518842 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
LAMA4-211ENST00000518842 SSFA2P28290 1259 aa12.13□□□□□ -0.47
LAMA4-211ENST00000518842 AKAP4Q5JQC9 854 aa12.13□□□□□ -0.47
LAMA4-211ENST00000518842 C1orf141Q5JVX7 400 aa12.13□□□□□ -0.47
LAMA4-211ENST00000518842 AK7Q96M32 723 aa12.13□□□□□ -0.47
LAMA4-211ENST00000518842 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
LAMA4-211ENST00000518842 UTRNP46939 3433 aa12.13□□□□□ -0.47
LAMA4-211ENST00000518842 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
LAMA4-211ENST00000518842 MRC1P22897 1456 aa12.13□□□□□ -0.47
LAMA4-211ENST00000518842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.12□□□□□ -0.47
LAMA4-211ENST00000518842 HMOX1P09601 288 aa12.12□□□□□ -0.47
LAMA4-211ENST00000518842 ATP6V1AP38606 617 aa12.12□□□□□ -0.47
LAMA4-211ENST00000518842 CABP4P57796 275 aa12.12□□□□□ -0.47
LAMA4-211ENST00000518842 SMIM5Q71RC9 77 aa12.12□□□□□ -0.47
LAMA4-211ENST00000518842 RNF25Q96BH1 459 aaPredicted RBP12.12□□□□□ -0.47
LAMA4-211ENST00000518842 ZNF831Q5JPB2 1677 aa12.11□□□□□ -0.47
LAMA4-211ENST00000518842 RC3H1Q5TC82 1133 aaKnown RBP12.11□□□□□ -0.47
LAMA4-211ENST00000518842 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
LAMA4-211ENST00000518842 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
LAMA4-211ENST00000518842 MTHFSDQ2M296 383 aaKnown RBP12.1□□□□□ -0.47
LAMA4-211ENST00000518842 NFATC2IPQ8NCF5 419 aa12.1□□□□□ -0.47
LAMA4-211ENST00000518842 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
LAMA4-211ENST00000518842 UBR3Q6ZT12 1888 aa12.09□□□□□ -0.47
LAMA4-211ENST00000518842 GNPATO15228 680 aa12.09□□□□□ -0.47
LAMA4-211ENST00000518842 RNMTO43148 476 aaKnown RBP12.09□□□□□ -0.47
LAMA4-211ENST00000518842 PHF14O94880 888 aa12.09□□□□□ -0.47
LAMA4-211ENST00000518842 NLGN2Q8NFZ4 835 aa12.09□□□□□ -0.47
LAMA4-211ENST00000518842 SLC52A2Q9HAB3 445 aa12.09□□□□□ -0.47
LAMA4-211ENST00000518842 LGR6Q9HBX8 967 aa12.09□□□□□ -0.47
LAMA4-211ENST00000518842 CICQ96RK0 1608 aaPredicted RBP12.08□□□□□ -0.48
LAMA4-211ENST00000518842 YY1P25490 414 aa12.08□□□□□ -0.48
LAMA4-211ENST00000518842 PPP2R1AP30153 589 aa12.07□□□□□ -0.48
LAMA4-211ENST00000518842 CD2APQ9Y5K6 639 aa12.07□□□□□ -0.48
LAMA4-211ENST00000518842 PTCD1O75127 700 aaKnown RBP12.06□□□□□ -0.48
LAMA4-211ENST00000518842 RPS6KA4O75676 772 aa12.06□□□□□ -0.48
LAMA4-211ENST00000518842 CNGB1Q14028 1251 aaPredicted RBP12.06□□□□□ -0.48
LAMA4-211ENST00000518842 RSPH6AQ9H0K4 717 aa12.06□□□□□ -0.48
LAMA4-211ENST00000518842 RTCBQ9Y3I0 505 aaKnown RBP12.06□□□□□ -0.48
LAMA4-211ENST00000518842 KCPQ6ZWJ8 1503 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms