RNA–Protein interactions for RNA: ENST00000518840.5

R3HCC1-204, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene R3HCC1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-204ENST00000518840 BRCA1P38398 1863 aaKnown RBP25.09■■□□□ 1.61
R3HCC1-204ENST00000518840 GAS2L2Q8NHY3 880 aa25.09■■□□□ 1.61
R3HCC1-204ENST00000518840 GNAT3A8MTJ3 354 aa25.08■■□□□ 1.61
R3HCC1-204ENST00000518840 CHRNA5P30532 468 aa25.08■■□□□ 1.61
R3HCC1-204ENST00000518840 NFIXQ14938 502 aa25.08■■□□□ 1.61
R3HCC1-204ENST00000518840 ZNF496Q96IT1 587 aaPredicted RBP25.08■■□□□ 1.61
R3HCC1-204ENST00000518840 PHACTR3Q96KR7 559 aa25.08■■□□□ 1.61
R3HCC1-204ENST00000518840 PIM2Q9P1W9 311 aa25.08■■□□□ 1.61
R3HCC1-204ENST00000518840 UBR2Q8IWV8 1755 aa25.08■■□□□ 1.6
R3HCC1-204ENST00000518840 KIF3CO14782 793 aa25.07■■□□□ 1.6
R3HCC1-204ENST00000518840 CANXP27824 592 aaKnown RBP25.06■■□□□ 1.6
R3HCC1-204ENST00000518840 TTC5Q8N0Z6 440 aa25.06■■□□□ 1.6
R3HCC1-204ENST00000518840 RSPH6AQ9H0K4 717 aa25.06■■□□□ 1.6
R3HCC1-204ENST00000518840 PRKAR2BP31323 418 aa25.05■■□□□ 1.6
R3HCC1-204ENST00000518840 TEFQ10587 303 aa25.05■■□□□ 1.6
R3HCC1-204ENST00000518840 ZNF790Q6PG37 636 aa25.05■■□□□ 1.6
R3HCC1-204ENST00000518840 DALRD3Q5D0E6 543 aaKnown RBP25.04■■□□□ 1.6
R3HCC1-204ENST00000518840 HEG1Q9ULI3 1381 aa25.04■■□□□ 1.6
R3HCC1-204ENST00000518840 EIF5P55010 431 aaKnown RBP25.03■■□□□ 1.6
R3HCC1-204ENST00000518840 CEMIPQ8WUJ3 1361 aa25.03■■□□□ 1.6
R3HCC1-204ENST00000518840 STARD3NLO95772 234 aa25.02■■□□□ 1.6
R3HCC1-204ENST00000518840 PPP2R1AP30153 589 aa25.02■■□□□ 1.6
R3HCC1-204ENST00000518840 CFAP53Q96M91 514 aa25.02■■□□□ 1.6
R3HCC1-204ENST00000518840 KCNQ3O43525 872 aa25.01■■□□□ 1.59
R3HCC1-204ENST00000518840 C9orf131Q5VYM1 1079 aa25.01■■□□□ 1.59
R3HCC1-204ENST00000518840 SIPA1L3O60292 1781 aaPredicted RBP25■■□□□ 1.59
R3HCC1-204ENST00000518840 ARFGEF1Q9Y6D6 1849 aa25■■□□□ 1.59
R3HCC1-204ENST00000518840 SERPINB2P05120 415 aa25■■□□□ 1.59
R3HCC1-204ENST00000518840 HSPA6P17066 643 aa24.99■■□□□ 1.59
R3HCC1-204ENST00000518840 NRXN2Q9P2S2 1712 aa24.99■■□□□ 1.59
R3HCC1-204ENST00000518840 AFDNP55196 1824 aaKnown RBP24.98■■□□□ 1.59
R3HCC1-204ENST00000518840 CARMIL3Q8ND23 1372 aa24.97■■□□□ 1.59
R3HCC1-204ENST00000518840 BICDL1Q6ZP65 573 aa24.97■■□□□ 1.59
R3HCC1-204ENST00000518840 FMNL2Q96PY5 1086 aa24.97■■□□□ 1.59
R3HCC1-204ENST00000518840 TEX13AQ9BXU3 409 aaPredicted RBP24.97■■□□□ 1.59
R3HCC1-204ENST00000518840 NMRK2Q9NPI5 230 aa24.97■■□□□ 1.59
R3HCC1-204ENST00000518840 U2AF1L5P0DN76 240 aaPredicted RBP24.96■■□□□ 1.59
R3HCC1-204ENST00000518840 U2AF1Q01081 240 aaKnown RBP eCLIP24.96■■□□□ 1.59
R3HCC1-204ENST00000518840 NUDCQ9Y266 331 aa24.96■■□□□ 1.59
R3HCC1-204ENST00000518840 A0A087WZG4 1122 aa24.95■■□□□ 1.58
R3HCC1-204ENST00000518840 BTBD11A6QL63 1104 aa24.95■■□□□ 1.58
R3HCC1-204ENST00000518840 A1BGP04217 495 aa24.95■■□□□ 1.58
R3HCC1-204ENST00000518840 TBC1D9BQ66K14 1250 aa24.95■■□□□ 1.58
R3HCC1-204ENST00000518840 TBC1D2BQ9UPU7 963 aa24.95■■□□□ 1.58
R3HCC1-204ENST00000518840 ZNF330Q9Y3S2 320 aaPredicted RBP24.95■■□□□ 1.58
R3HCC1-204ENST00000518840 IL6STP40189 918 aaPredicted RBP24.94■■□□□ 1.58
R3HCC1-204ENST00000518840 MCM10Q7L590 875 aa24.93■■□□□ 1.58
R3HCC1-204ENST00000518840 RNF181Q9P0P0 153 aa24.93■■□□□ 1.58
R3HCC1-204ENST00000518840 CEP350Q5VT06 3117 aa24.93■■□□□ 1.58
R3HCC1-204ENST00000518840 PRAMEF22A3QJZ6 481 aa24.91■■□□□ 1.58
R3HCC1-204ENST00000518840 TOMM70O94826 608 aa24.91■■□□□ 1.58
R3HCC1-204ENST00000518840 RASSF7Q02833 373 aa24.91■■□□□ 1.58
R3HCC1-204ENST00000518840 DCTN1Q14203 1278 aa24.91■■□□□ 1.58
R3HCC1-204ENST00000518840 C2CD5Q86YS7 1000 aa24.91■■□□□ 1.58
R3HCC1-204ENST00000518840 USP16Q9Y5T5 823 aa24.91■■□□□ 1.58
R3HCC1-204ENST00000518840 SCN7AQ01118 1682 aa24.9■■□□□ 1.58
R3HCC1-204ENST00000518840 CAMTA2O94983 1202 aa24.89■■□□□ 1.58
R3HCC1-204ENST00000518840 PIP4K2AP48426 406 aaPredicted RBP24.89■■□□□ 1.58
R3HCC1-204ENST00000518840 PRELPP51888 382 aa24.89■■□□□ 1.58
R3HCC1-204ENST00000518840 CCDC24Q8N4L8 307 aa24.89■■□□□ 1.58
R3HCC1-204ENST00000518840 TTLL6Q8N841 843 aa24.88■■□□□ 1.57
R3HCC1-204ENST00000518840 RTF1Q92541 710 aaKnown RBP24.88■■□□□ 1.57
R3HCC1-204ENST00000518840 H0YIN7 160 aa24.87■■□□□ 1.57
R3HCC1-204ENST00000518840 PRR5LQ6MZQ0 368 aa24.87■■□□□ 1.57
R3HCC1-204ENST00000518840 DLEC1Q9Y238 1755 aa24.87■■□□□ 1.57
R3HCC1-204ENST00000518840 BRIP1Q9BX63 1249 aa24.85■■□□□ 1.57
R3HCC1-204ENST00000518840 SBF1O95248 1867 aa24.84■■□□□ 1.57
R3HCC1-204ENST00000518840 ANKRD31Q8N7Z5 1873 aa24.84■■□□□ 1.57
R3HCC1-204ENST00000518840 DZIP3Q86Y13 1208 aaKnown RBP24.84■■□□□ 1.57
R3HCC1-204ENST00000518840 NFKBIEO00221 500 aa24.83■■□□□ 1.57
R3HCC1-204ENST00000518840 HTATSF1O43719 755 aaKnown RBP24.83■■□□□ 1.57
R3HCC1-204ENST00000518840 SNRPA1P09661 255 aaKnown RBP24.83■■□□□ 1.57
R3HCC1-204ENST00000518840 KDM2BQ8NHM5 1336 aa24.83■■□□□ 1.56
R3HCC1-204ENST00000518840 NPM2Q86SE8 214 aaKnown RBP24.82■■□□□ 1.56
R3HCC1-204ENST00000518840 SETDB2Q96T68 719 aa24.82■■□□□ 1.56
R3HCC1-204ENST00000518840 RRAGCQ9HB90 399 aa24.82■■□□□ 1.56
R3HCC1-204ENST00000518840 NBPF26B4DH59 902 aa24.81■■□□□ 1.56
R3HCC1-204ENST00000518840 LMNB1P20700 586 aa24.81■■□□□ 1.56
R3HCC1-204ENST00000518840 PDE6BP35913 854 aa24.81■■□□□ 1.56
R3HCC1-204ENST00000518840 NBPF10Q6P3W6 841 aaKnown RBP24.81■■□□□ 1.56
R3HCC1-204ENST00000518840 NBPF15Q8N660 670 aa24.81■■□□□ 1.56
R3HCC1-204ENST00000518840 RBM46Q8TBY0 533 aaKnown RBP24.81■■□□□ 1.56
R3HCC1-204ENST00000518840 ZNF622Q969S3 477 aaKnown RBP eCLIP24.81■■□□□ 1.56
R3HCC1-204ENST00000518840 MIS18AQ9NYP9 233 aa24.81■■□□□ 1.56
R3HCC1-204ENST00000518840 CNBD1Q8NA66 436 aa24.8■■□□□ 1.56
R3HCC1-204ENST00000518840 COL11A2P13942 1736 aaPredicted RBP24.79■■□□□ 1.56
R3HCC1-204ENST00000518840 APLP1P51693 650 aa24.79■■□□□ 1.56
R3HCC1-204ENST00000518840 TAF7Q15545 349 aaPredicted RBP24.79■■□□□ 1.56
R3HCC1-204ENST00000518840 BCORQ6W2J9 1755 aa24.79■■□□□ 1.56
R3HCC1-204ENST00000518840 PLEKHF1Q96S99 279 aa24.78■■□□□ 1.56
R3HCC1-204ENST00000518840 ZNF219Q9P2Y4 722 aaPredicted RBP24.78■■□□□ 1.56
R3HCC1-204ENST00000518840 PDZRN3Q9UPQ7 1066 aa24.78■■□□□ 1.56
R3HCC1-204ENST00000518840 ZC3H4Q9UPT8 1303 aaKnown RBP24.78■■□□□ 1.56
R3HCC1-204ENST00000518840 C21orf2O43822 256 aa24.77■■□□□ 1.56
R3HCC1-204ENST00000518840 C16orf71Q8IYS4 520 aaPredicted RBP24.77■■□□□ 1.56
R3HCC1-204ENST00000518840 CLEC4GQ6UXB4 293 aa24.76■■□□□ 1.55
R3HCC1-204ENST00000518840 DNAJC5GQ8N7S2 189 aa24.76■■□□□ 1.55
R3HCC1-204ENST00000518840 GLTPD2A6NH11 291 aa24.74■■□□□ 1.55
R3HCC1-204ENST00000518840 NPHP1O15259 732 aa24.74■■□□□ 1.55
R3HCC1-204ENST00000518840 SRGNP10124 158 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms