RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 SETD1BQ9UPS6 1966 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 UBTFL1P0CB47 393 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 NASPP49321 788 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 PRIM1P49642 420 aaKnown RBP10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 BEND3Q5T5X7 828 aa10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 CHPF2Q9P2E5 772 aa10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 BRD1O95696 1058 aa10.32□□□□□ -0.76
CTNNA1-210ENST00000518825 UPF3BQ9BZI7 483 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-210ENST00000518825 EIF2S2P20042 333 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-210ENST00000518825 NOL8Q76FK4 1167 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-210ENST00000518825 IP6K1Q92551 441 aa10.32□□□□□ -0.76
CTNNA1-210ENST00000518825 CRYBG1Q9Y4K1 1723 aa10.32□□□□□ -0.76
CTNNA1-210ENST00000518825 ADCY9O60503 1353 aa10.32□□□□□ -0.76
CTNNA1-210ENST00000518825 LRRC59Q96AG4 307 aaKnown RBP10.32□□□□□ -0.76
CTNNA1-210ENST00000518825 RHPN1Q8TCX5 695 aa10.31□□□□□ -0.76
CTNNA1-210ENST00000518825 PI4KAP2A4QPH2 592 aa10.31□□□□□ -0.76
CTNNA1-210ENST00000518825 NCLP19338 710 aaKnown RBP10.31□□□□□ -0.76
CTNNA1-210ENST00000518825 ANAPC15P60006 121 aa10.31□□□□□ -0.76
CTNNA1-210ENST00000518825 PI4KAP1Q8N8J0 262 aa10.31□□□□□ -0.76
CTNNA1-210ENST00000518825 PXDNQ92626 1479 aa10.31□□□□□ -0.76
CTNNA1-210ENST00000518825 AOX1Q06278 1338 aa10.31□□□□□ -0.76
CTNNA1-210ENST00000518825 SURF6O75683 361 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 HSPA4P34932 840 aa10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 SRCIN1Q9C0H9 1055 aa10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 PHF8Q9UPP1 1060 aa10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 LMO7Q8WWI1 1683 aa10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 CHD2O14647 1828 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 PRAMEF22A3QJZ6 481 aa10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 CCDC173Q0VFZ6 552 aa10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 C14orf37Q86TY3 774 aa10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 RASEFQ8IZ41 740 aa10.3□□□□□ -0.76
CTNNA1-210ENST00000518825 PROSER3Q2NL68 480 aa10.29□□□□□ -0.76
CTNNA1-210ENST00000518825 MPRIPQ6WCQ1 1025 aa10.29□□□□□ -0.76
CTNNA1-210ENST00000518825 LSG1Q9H089 658 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-210ENST00000518825 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-210ENST00000518825 PHRF1Q9P1Y6 1649 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-210ENST00000518825 SGSM2O43147 1006 aa10.29□□□□□ -0.76
CTNNA1-210ENST00000518825 DNAAF4Q8WXU2 420 aa10.29□□□□□ -0.76
CTNNA1-210ENST00000518825 INTS4Q96HW7 963 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-210ENST00000518825 RPAP1Q9BWH6 1393 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-210ENST00000518825 RAB11FIP3O75154 756 aa10.28□□□□□ -0.76
CTNNA1-210ENST00000518825 PDLIM2Q96JY6 352 aa10.28□□□□□ -0.76
CTNNA1-210ENST00000518825 TTC14Q96N46 770 aa10.28□□□□□ -0.76
CTNNA1-210ENST00000518825 MCM2P49736 904 aa10.28□□□□□ -0.76
CTNNA1-210ENST00000518825 LARP6Q9BRS8 491 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-210ENST00000518825 SNX14Q9Y5W7 946 aa10.28□□□□□ -0.76
CTNNA1-210ENST00000518825 HEG1Q9ULI3 1381 aa10.28□□□□□ -0.76
CTNNA1-210ENST00000518825 SYCE3A1L190 88 aa10.28□□□□□ -0.76
CTNNA1-210ENST00000518825 RAD50Q92878 1312 aa10.27□□□□□ -0.76
CTNNA1-210ENST00000518825 DTNBO60941 627 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 GADD45BO75293 160 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 COL9A3Q14050 684 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 TRIM44Q96DX7 344 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 NCAPD2Q15021 1401 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 BTBD11A6QL63 1104 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 HOXB7P09629 217 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 GDPD2Q9HCC8 539 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 PODXL2Q9NZ53 605 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 USP42Q9H9J4 1324 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 CPA1P15085 419 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 FOXD4L6Q3SYB3 417 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 LRSAM1Q6UWE0 723 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 FOXD4L3Q6VB84 417 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 KIF1BPQ96EK5 621 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 KAZALD1Q96I82 304 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 SPG7Q9UQ90 795 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 AXIN2Q9Y2T1 843 aa10.27□□□□□ -0.77
CTNNA1-210ENST00000518825 TCHHQ07283 1943 aa10.26□□□□□ -0.77
CTNNA1-210ENST00000518825 MCCP23508 829 aa10.26□□□□□ -0.77
CTNNA1-210ENST00000518825 AKAP4Q5JQC9 854 aa10.26□□□□□ -0.77
CTNNA1-210ENST00000518825 NAP1L5Q96NT1 182 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-210ENST00000518825 MTX1Q13505 466 aa10.26□□□□□ -0.77
CTNNA1-210ENST00000518825 RUFY3Q7L099 469 aa10.26□□□□□ -0.77
CTNNA1-210ENST00000518825 UBE2Q2Q8WVN8 375 aa10.26□□□□□ -0.77
CTNNA1-210ENST00000518825 PA2G4Q9UQ80 394 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-210ENST00000518825 ZBTB7CA1YPR0 619 aa10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 RNMTO43148 476 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 LARGE1O95461 756 aa10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 XPCQ01831 940 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 CWF19L2Q2TBE0 894 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 ESCO1Q5FWF5 840 aa10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 ZNF530Q6P9A1 599 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 CWC27Q6UX04 472 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 EPB41L2O43491 1005 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 GIGYF1O75420 1035 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 PTH1RQ03431 593 aa10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 ORAI2Q96SN7 254 aa10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 SIPA1L3O60292 1781 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 AK2P54819 239 aa10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 ARHGEF25Q86VW2 580 aa10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 ZSCAN30Q86W11 494 aa10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 MAP3K2Q9Y2U5 619 aa10.25□□□□□ -0.77
CTNNA1-210ENST00000518825 ADCK5Q3MIX3 580 aa10.24□□□□□ -0.77
CTNNA1-210ENST00000518825 GCP02774 474 aa10.24□□□□□ -0.77
CTNNA1-210ENST00000518825 PSME1Q06323 249 aa10.24□□□□□ -0.77
CTNNA1-210ENST00000518825 PDIA6Q15084 440 aa10.24□□□□□ -0.77
CTNNA1-210ENST00000518825 USP48Q86UV5 1035 aa10.24□□□□□ -0.77
CTNNA1-210ENST00000518825 PKNOX2Q96KN3 472 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms