RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 MAP3K10Q02779 954 aa10.04□□□□□ -0.8
CCDC6-203ENST00000518638 ATP7AQ04656 1500 aa10.03□□□□□ -0.8
CCDC6-203ENST00000518638 FAM135AQ9P2D6 1515 aa10.03□□□□□ -0.8
CCDC6-203ENST00000518638 ADAM23O75077 832 aa10.03□□□□□ -0.8
CCDC6-203ENST00000518638 NBPF14Q5TI25 921 aa10.03□□□□□ -0.8
CCDC6-203ENST00000518638 CDC42BPAQ5VT25 1732 aa10.03□□□□□ -0.8
CCDC6-203ENST00000518638 SH3RF1Q7Z6J0 888 aa10.03□□□□□ -0.8
CCDC6-203ENST00000518638 HELBQ8NG08 1087 aaPredicted RBP10.03□□□□□ -0.8
CCDC6-203ENST00000518638 PLEKHH2Q8IVE3 1493 aa10.03□□□□□ -0.8
CCDC6-203ENST00000518638 SYNMO15061 1565 aa10.02□□□□□ -0.81
CCDC6-203ENST00000518638 MSTNO14793 375 aa10.02□□□□□ -0.81
CCDC6-203ENST00000518638 ADAMTS2O95450 1211 aa10.02□□□□□ -0.81
CCDC6-203ENST00000518638 PGPEP1Q9NXJ5 209 aa10.02□□□□□ -0.81
CCDC6-203ENST00000518638 RNF17Q9BXT8 1623 aaKnown RBP10.02□□□□□ -0.81
CCDC6-203ENST00000518638 A2MP01023 1474 aa10.02□□□□□ -0.81
CCDC6-203ENST00000518638 ADGBQ8N7X0 1667 aa10.02□□□□□ -0.81
CCDC6-203ENST00000518638 SPAG9O60271 1321 aaKnown RBP10.02□□□□□ -0.81
CCDC6-203ENST00000518638 NEURL4Q96JN8 1562 aa10.01□□□□□ -0.81
CCDC6-203ENST00000518638 INO80Q9ULG1 1556 aaPredicted RBP10.01□□□□□ -0.81
CCDC6-203ENST00000518638 Q6ZVU0 165 aa10.01□□□□□ -0.81
CCDC6-203ENST00000518638 TSC1Q92574 1164 aa10.01□□□□□ -0.81
CCDC6-203ENST00000518638 DEPDC5O75140 1603 aa10□□□□□ -0.81
CCDC6-203ENST00000518638 MAGEB6P1A0A0J9YX57 407 aa10□□□□□ -0.81
CCDC6-203ENST00000518638 PER1O15534 1290 aaPredicted RBP10□□□□□ -0.81
CCDC6-203ENST00000518638 CBLBQ13191 982 aa10□□□□□ -0.81
CCDC6-203ENST00000518638 PPP1R26Q5T8A7 1209 aaPredicted RBP10□□□□□ -0.81
CCDC6-203ENST00000518638 SH3BP5LQ7L8J4 393 aa10□□□□□ -0.81
CCDC6-203ENST00000518638 SYCP2Q9BX26 1530 aa10□□□□□ -0.81
CCDC6-203ENST00000518638 LRRIQ1Q96JM4 1722 aa9.99□□□□□ -0.81
CCDC6-203ENST00000518638 ARHGAP35Q9NRY4 1499 aa9.99□□□□□ -0.81
CCDC6-203ENST00000518638 SRSF11Q05519 484 aaKnown RBP9.99□□□□□ -0.81
CCDC6-203ENST00000518638 TMEM259Q4ZIN3 620 aa9.99□□□□□ -0.81
CCDC6-203ENST00000518638 LYPD4Q6UWN0 246 aa9.99□□□□□ -0.81
CCDC6-203ENST00000518638 VWDEQ8N2E2 1590 aa9.99□□□□□ -0.81
CCDC6-203ENST00000518638 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
CCDC6-203ENST00000518638 MED14O60244 1454 aa9.98□□□□□ -0.81
CCDC6-203ENST00000518638 AP1G2O75843 785 aa9.98□□□□□ -0.81
CCDC6-203ENST00000518638 ANKLE2Q86XL3 938 aa9.98□□□□□ -0.81
CCDC6-203ENST00000518638 NLRP1Q9C000 1473 aa9.98□□□□□ -0.81
CCDC6-203ENST00000518638 CTDSPL2Q05D32 466 aa9.97□□□□□ -0.81
CCDC6-203ENST00000518638 PLA2G4EQ3MJ16 856 aa9.97□□□□□ -0.81
CCDC6-203ENST00000518638 GGT6Q6P531 493 aa9.97□□□□□ -0.81
CCDC6-203ENST00000518638 THEMISQ8N1K5 641 aaPredicted RBP9.97□□□□□ -0.81
CCDC6-203ENST00000518638 SPOCK3Q9BQ16 436 aa9.97□□□□□ -0.81
CCDC6-203ENST00000518638 ENAMQ9NRM1 1142 aa9.97□□□□□ -0.81
CCDC6-203ENST00000518638 TNRQ92752 1358 aa9.97□□□□□ -0.81
CCDC6-203ENST00000518638 ALKQ9UM73 1620 aa9.96□□□□□ -0.81
CCDC6-203ENST00000518638 IQGAP1P46940 1657 aa9.96□□□□□ -0.81
CCDC6-203ENST00000518638 PHF20L1A8MW92 1017 aa9.96□□□□□ -0.82
CCDC6-203ENST00000518638 CELA2BP08218 269 aaPredicted RBP9.96□□□□□ -0.82
CCDC6-203ENST00000518638 USP17L8P0C7I0 530 aa9.96□□□□□ -0.82
CCDC6-203ENST00000518638 BANK1Q8NDB2 785 aa9.96□□□□□ -0.82
CCDC6-203ENST00000518638 NPHP4O75161 1426 aaPredicted RBP9.96□□□□□ -0.82
CCDC6-203ENST00000518638 PZPP20742 1482 aa9.96□□□□□ -0.82
CCDC6-203ENST00000518638 KDM5DQ9BY66 1539 aa9.96□□□□□ -0.82
CCDC6-203ENST00000518638 UBTFP17480 764 aaKnown RBP9.95□□□□□ -0.82
CCDC6-203ENST00000518638 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
CCDC6-203ENST00000518638 CARD14Q9BXL6 1004 aa9.95□□□□□ -0.82
CCDC6-203ENST00000518638 CASKIN1Q8WXD9 1431 aa9.95□□□□□ -0.82
CCDC6-203ENST00000518638 UGGT1Q9NYU2 1555 aa9.95□□□□□ -0.82
CCDC6-203ENST00000518638 CTSOP43234 321 aaPredicted RBP9.94□□□□□ -0.82
CCDC6-203ENST00000518638 ZNF777Q9ULD5 760 aaPredicted RBP9.94□□□□□ -0.82
CCDC6-203ENST00000518638 GPATCH8Q9UKJ3 1502 aaKnown RBP9.93□□□□□ -0.82
CCDC6-203ENST00000518638 ERFEQ4G0M1 354 aa9.93□□□□□ -0.82
CCDC6-203ENST00000518638 GALNT6Q8NCL4 622 aa9.93□□□□□ -0.82
CCDC6-203ENST00000518638 LRRN4Q8WUT4 740 aa9.93□□□□□ -0.82
CCDC6-203ENST00000518638 GPKOWQ92917 476 aaPredicted RBP eCLIP9.93□□□□□ -0.82
CCDC6-203ENST00000518638 POLMQ9NP87 494 aaPredicted RBP9.93□□□□□ -0.82
CCDC6-203ENST00000518638 TIMELESSQ9UNS1 1208 aa9.93□□□□□ -0.82
CCDC6-203ENST00000518638 LRRC7Q96NW7 1537 aa9.92□□□□□ -0.82
CCDC6-203ENST00000518638 FYCO1Q9BQS8 1478 aa9.92□□□□□ -0.82
CCDC6-203ENST00000518638 RTEL1-TNFRSF6BF6WH68 1400 aa9.92□□□□□ -0.82
CCDC6-203ENST00000518638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC6-203ENST00000518638 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
CCDC6-203ENST00000518638 RELBQ01201 579 aa9.92□□□□□ -0.82
CCDC6-203ENST00000518638 INSM2Q96T92 566 aaPredicted RBP9.92□□□□□ -0.82
CCDC6-203ENST00000518638 HNRNPMP52272 730 aaKnown RBP eCLIP9.91□□□□□ -0.82
CCDC6-203ENST00000518638 DHX9Q08211 1270 aaKnown RBP9.91□□□□□ -0.82
CCDC6-203ENST00000518638 PODNQ7Z5L7 613 aa9.91□□□□□ -0.82
CCDC6-203ENST00000518638 AGBL1Q96MI9 1066 aa9.91□□□□□ -0.82
CCDC6-203ENST00000518638 CFDP1Q9UEE9 299 aaPredicted RBP9.91□□□□□ -0.82
CCDC6-203ENST00000518638 GAS6Q14393 721 aa9.9□□□□□ -0.82
CCDC6-203ENST00000518638 RNF217Q8TC41 542 aa9.9□□□□□ -0.82
CCDC6-203ENST00000518638 KRTAP4-8Q9BYQ9 185 aa9.9□□□□□ -0.82
CCDC6-203ENST00000518638 MIA2Q96PC5 1412 aa9.9□□□□□ -0.83
CCDC6-203ENST00000518638 DHX29Q7Z478 1369 aaKnown RBP9.89□□□□□ -0.83
CCDC6-203ENST00000518638 CCNB3Q8WWL7 1395 aa9.89□□□□□ -0.83
CCDC6-203ENST00000518638 PROCP04070 461 aa9.89□□□□□ -0.83
CCDC6-203ENST00000518638 ITGB2P05107 769 aa9.89□□□□□ -0.83
CCDC6-203ENST00000518638 BEND7Q8N7W2 519 aaPredicted RBP9.89□□□□□ -0.83
CCDC6-203ENST00000518638 SLC10A4Q96EP9 437 aa9.89□□□□□ -0.83
CCDC6-203ENST00000518638 HMX1Q9NP08 348 aaPredicted RBP9.89□□□□□ -0.83
CCDC6-203ENST00000518638 RGS17Q9UGC6 210 aaPredicted RBP9.89□□□□□ -0.83
CCDC6-203ENST00000518638 CDV3Q9UKY7 258 aaKnown RBP9.89□□□□□ -0.83
CCDC6-203ENST00000518638 STRCP1A6NGW2 1772 aa9.88□□□□□ -0.83
CCDC6-203ENST00000518638 CNTNAP5Q8WYK1 1306 aa9.88□□□□□ -0.83
CCDC6-203ENST00000518638 ZC3H13Q5T200 1668 aaKnown RBP9.88□□□□□ -0.83
CCDC6-203ENST00000518638 KCTD15Q96SI1 283 aaPredicted RBP9.88□□□□□ -0.83
CCDC6-203ENST00000518638 FAM135BQ49AJ0 1406 aa9.88□□□□□ -0.83
CCDC6-203ENST00000518638 WASHC2CQ9Y4E1 1318 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms