RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 TNS1Q9HBL0 1735 aaKnown RBP16.89■□□□□ 0.29
PABPC1-205ENST00000518196 ZNF521Q96K83 1311 aa16.89■□□□□ 0.29
PABPC1-205ENST00000518196 PLSCR1O15162 318 aa16.88■□□□□ 0.29
PABPC1-205ENST00000518196 PYGBP11216 843 aa16.88■□□□□ 0.29
PABPC1-205ENST00000518196 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
PABPC1-205ENST00000518196 ZNF853P0CG23 659 aa16.87■□□□□ 0.29
PABPC1-205ENST00000518196 ZBED9Q6R2W3 1325 aa16.87■□□□□ 0.29
PABPC1-205ENST00000518196 PAPPAQ13219 1627 aa16.86■□□□□ 0.29
PABPC1-205ENST00000518196 PTCD1O75127 700 aaKnown RBP16.86■□□□□ 0.29
PABPC1-205ENST00000518196 FMNL2Q96PY5 1086 aa16.86■□□□□ 0.29
PABPC1-205ENST00000518196 MYH16Q9H6N6 1097 aa16.86■□□□□ 0.29
PABPC1-205ENST00000518196 KDM3BQ7LBC6 1761 aa16.86■□□□□ 0.29
PABPC1-205ENST00000518196 KCNQ3O43525 872 aa16.85■□□□□ 0.29
PABPC1-205ENST00000518196 HMGB2P26583 209 aaKnown RBP16.85■□□□□ 0.29
PABPC1-205ENST00000518196 YTHDC1Q96MU7 727 aaKnown RBP16.85■□□□□ 0.29
PABPC1-205ENST00000518196 MBIPQ9NS73 344 aa16.85■□□□□ 0.29
PABPC1-205ENST00000518196 LOC102724428A0A0B4J2F2 783 aa16.84■□□□□ 0.29
PABPC1-205ENST00000518196 E9PSI1 815 aa16.84■□□□□ 0.29
PABPC1-205ENST00000518196 SIK1P57059 783 aa16.84■□□□□ 0.29
PABPC1-205ENST00000518196 EN1Q05925 392 aaPredicted RBP16.84■□□□□ 0.29
PABPC1-205ENST00000518196 LY75O60449 1722 aa16.84■□□□□ 0.29
PABPC1-205ENST00000518196 RGPD3A6NKT7 1758 aaPredicted RBP16.83■□□□□ 0.28
PABPC1-205ENST00000518196 ATP6V1AP38606 617 aa16.83■□□□□ 0.28
PABPC1-205ENST00000518196 EIF4A1P60842 406 aaKnown RBP16.83■□□□□ 0.28
PABPC1-205ENST00000518196 SLC27A3Q5K4L6 730 aa16.83■□□□□ 0.28
PABPC1-205ENST00000518196 RGPD4Q7Z3J3 1758 aa16.83■□□□□ 0.28
PABPC1-205ENST00000518196 UBR2Q8IWV8 1755 aa16.83■□□□□ 0.28
PABPC1-205ENST00000518196 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
PABPC1-205ENST00000518196 SLFN5Q08AF3 891 aa16.82■□□□□ 0.28
PABPC1-205ENST00000518196 TXNRD1Q16881 649 aa16.82■□□□□ 0.28
PABPC1-205ENST00000518196 DEFB132Q7Z7B7 95 aa16.82■□□□□ 0.28
PABPC1-205ENST00000518196 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
PABPC1-205ENST00000518196 CAMKK2Q96RR4 588 aa16.82■□□□□ 0.28
PABPC1-205ENST00000518196 CCNL1Q9UK58 526 aaPredicted RBP16.82■□□□□ 0.28
PABPC1-205ENST00000518196 KCPQ6ZWJ8 1503 aa16.81■□□□□ 0.28
PABPC1-205ENST00000518196 HEG1Q9ULI3 1381 aa16.81■□□□□ 0.28
PABPC1-205ENST00000518196 SNRPA1P09661 255 aaKnown RBP16.81■□□□□ 0.28
PABPC1-205ENST00000518196 EZH2Q15910 746 aaKnown RBP16.81■□□□□ 0.28
PABPC1-205ENST00000518196 TSR2Q969E8 191 aaKnown RBP16.81■□□□□ 0.28
PABPC1-205ENST00000518196 TEX13AQ9BXU3 409 aaPredicted RBP16.81■□□□□ 0.28
PABPC1-205ENST00000518196 FANCIQ9NVI1 1328 aa16.8■□□□□ 0.28
PABPC1-205ENST00000518196 PLCB2Q00722 1185 aa16.8■□□□□ 0.28
PABPC1-205ENST00000518196 CDCA7LQ96GN5 454 aa16.8■□□□□ 0.28
PABPC1-205ENST00000518196 ZNF831Q5JPB2 1677 aa16.79■□□□□ 0.28
PABPC1-205ENST00000518196 RIOK3O14730 519 aaKnown RBP16.79■□□□□ 0.28
PABPC1-205ENST00000518196 GIGYF1O75420 1035 aaPredicted RBP16.78■□□□□ 0.28
PABPC1-205ENST00000518196 SLC4A9Q96Q91 983 aa16.78■□□□□ 0.28
PABPC1-205ENST00000518196 CHRM1P11229 460 aaPredicted RBP16.77■□□□□ 0.28
PABPC1-205ENST00000518196 KCNQ4P56696 695 aa16.77■□□□□ 0.28
PABPC1-205ENST00000518196 DUSP27Q5VZP5 1158 aa16.77■□□□□ 0.28
PABPC1-205ENST00000518196 DNAJC10Q8IXB1 793 aa16.77■□□□□ 0.28
PABPC1-205ENST00000518196 TRMT2AQ8IZ69 625 aaKnown RBP16.77■□□□□ 0.28
PABPC1-205ENST00000518196 CHMP4AQ9BY43 222 aa16.77■□□□□ 0.28
PABPC1-205ENST00000518196 LRRC4BQ9NT99 713 aa16.77■□□□□ 0.28
PABPC1-205ENST00000518196 SOS1Q07889 1333 aaPredicted RBP16.76■□□□□ 0.27
PABPC1-205ENST00000518196 TAF1LQ8IZX4 1826 aa16.76■□□□□ 0.27
PABPC1-205ENST00000518196 STARD3NLO95772 234 aa16.76■□□□□ 0.27
PABPC1-205ENST00000518196 HOXB7P09629 217 aa16.76■□□□□ 0.27
PABPC1-205ENST00000518196 EXOSC9Q06265 439 aaKnown RBP16.76■□□□□ 0.27
PABPC1-205ENST00000518196 ITPK1Q13572 414 aa16.76■□□□□ 0.27
PABPC1-205ENST00000518196 SOCS7O14512 581 aa16.75■□□□□ 0.27
PABPC1-205ENST00000518196 KRT24Q2M2I5 525 aa16.75■□□□□ 0.27
PABPC1-205ENST00000518196 C8orf58Q8NAV2 365 aa16.75■□□□□ 0.27
PABPC1-205ENST00000518196 BBXQ8WY36 941 aaPredicted RBP16.75■□□□□ 0.27
PABPC1-205ENST00000518196 USP16Q9Y5T5 823 aa16.75■□□□□ 0.27
PABPC1-205ENST00000518196 TJP1Q07157 1748 aa16.75■□□□□ 0.27
PABPC1-205ENST00000518196 RREB1Q92766 1687 aa16.75■□□□□ 0.27
PABPC1-205ENST00000518196 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
PABPC1-205ENST00000518196 PRAMEF22A3QJZ6 481 aa16.74■□□□□ 0.27
PABPC1-205ENST00000518196 ELL2O00472 640 aaPredicted RBP16.74■□□□□ 0.27
PABPC1-205ENST00000518196 TWISTNBQ3B726 338 aaPredicted RBP16.74■□□□□ 0.27
PABPC1-205ENST00000518196 LINC00116Q8NCU8 138 aa16.74■□□□□ 0.27
PABPC1-205ENST00000518196 C5P01031 1676 aa16.74■□□□□ 0.27
PABPC1-205ENST00000518196 CYP19A1P11511 503 aaPredicted RBP16.73■□□□□ 0.27
PABPC1-205ENST00000518196 EIF2S2P20042 333 aaKnown RBP16.73■□□□□ 0.27
PABPC1-205ENST00000518196 RC3H1Q5TC82 1133 aaKnown RBP16.73■□□□□ 0.27
PABPC1-205ENST00000518196 NBPF14Q5TI25 921 aa16.73■□□□□ 0.27
PABPC1-205ENST00000518196 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
PABPC1-205ENST00000518196 LAMB4A4D0S4 1761 aa16.73■□□□□ 0.27
PABPC1-205ENST00000518196 CRKLP46109 303 aaKnown RBP16.72■□□□□ 0.27
PABPC1-205ENST00000518196 HDGFL1Q5TGJ6 251 aa16.72■□□□□ 0.27
PABPC1-205ENST00000518196 AK7Q96M32 723 aa16.72■□□□□ 0.27
PABPC1-205ENST00000518196 CCDC87Q9NVE4 849 aa16.72■□□□□ 0.27
PABPC1-205ENST00000518196 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.72■□□□□ 0.27
PABPC1-205ENST00000518196 COL5A3P25940 1745 aaPredicted RBP16.72■□□□□ 0.27
PABPC1-205ENST00000518196 CNTNAP4Q9C0A0 1308 aa16.71■□□□□ 0.27
PABPC1-205ENST00000518196 C4BP0C0L5 1744 aa16.71■□□□□ 0.27
PABPC1-205ENST00000518196 NUP188Q5SRE5 1749 aa16.71■□□□□ 0.27
PABPC1-205ENST00000518196 CT47B1P0C2W7 299 aaPredicted RBP16.71■□□□□ 0.27
PABPC1-205ENST00000518196 STK32BQ9NY57 414 aa16.71■□□□□ 0.27
PABPC1-205ENST00000518196 VAMP4O75379 141 aa16.7■□□□□ 0.26
PABPC1-205ENST00000518196 CCDC30Q5VVM6 783 aa16.7■□□□□ 0.26
PABPC1-205ENST00000518196 NECTIN2Q92692 538 aa16.7■□□□□ 0.26
PABPC1-205ENST00000518196 ERBB4Q15303 1308 aa16.7■□□□□ 0.26
PABPC1-205ENST00000518196 MYH14Q7Z406 1995 aaKnown RBP16.69■□□□□ 0.26
PABPC1-205ENST00000518196 A1BGP04217 495 aa16.69■□□□□ 0.26
PABPC1-205ENST00000518196 CANXP27824 592 aaKnown RBP16.69■□□□□ 0.26
PABPC1-205ENST00000518196 INTS5Q6P9B9 1019 aaKnown RBP16.69■□□□□ 0.26
PABPC1-205ENST00000518196 NPM2Q86SE8 214 aaKnown RBP16.69■□□□□ 0.26
PABPC1-205ENST00000518196 GNPATO15228 680 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms