RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 HEG1Q9ULI3 1381 aa14.04□□□□□ -0.16
SPIDR-205ENST00000518060 C10orf71Q711Q0 1435 aa14.04□□□□□ -0.16
SPIDR-205ENST00000518060 A0A0G2JLW4 131 aa14.03□□□□□ -0.16
SPIDR-205ENST00000518060 KCNQ3O43525 872 aa14.03□□□□□ -0.16
SPIDR-205ENST00000518060 DDR1Q08345 913 aa14.03□□□□□ -0.16
SPIDR-205ENST00000518060 BCS1LQ9Y276 419 aa14.03□□□□□ -0.16
SPIDR-205ENST00000518060 CEMIPQ8WUJ3 1361 aa14.03□□□□□ -0.16
SPIDR-205ENST00000518060 PXDNLA1KZ92 1463 aa14.03□□□□□ -0.16
SPIDR-205ENST00000518060 VIRMAQ69YN4 1812 aaKnown RBP14.03□□□□□ -0.16
SPIDR-205ENST00000518060 RALBP1Q15311 655 aa14.02□□□□□ -0.17
SPIDR-205ENST00000518060 TEX13AQ9BXU3 409 aaPredicted RBP14.02□□□□□ -0.17
SPIDR-205ENST00000518060 NARFQ9UHQ1 456 aa14.02□□□□□ -0.17
SPIDR-205ENST00000518060 GOLGB1Q14789 3259 aaKnown RBP14.02□□□□□ -0.17
SPIDR-205ENST00000518060 A0A087WZG4 1122 aa14.01□□□□□ -0.17
SPIDR-205ENST00000518060 DPEP1P16444 411 aa14.01□□□□□ -0.17
SPIDR-205ENST00000518060 TGFB2P61812 414 aa14.01□□□□□ -0.17
SPIDR-205ENST00000518060 BICDL1Q6ZP65 573 aa14.01□□□□□ -0.17
SPIDR-205ENST00000518060 UBR2Q8IWV8 1755 aa14.01□□□□□ -0.17
SPIDR-205ENST00000518060 CHD4Q14839 1912 aa14□□□□□ -0.17
SPIDR-205ENST00000518060 PNNQ9H307 717 aaKnown RBP14□□□□□ -0.17
SPIDR-205ENST00000518060 POLRMTO00411 1230 aaKnown RBP13.99□□□□□ -0.17
SPIDR-205ENST00000518060 HTATSF1O43719 755 aaKnown RBP13.99□□□□□ -0.17
SPIDR-205ENST00000518060 A1BGP04217 495 aa13.99□□□□□ -0.17
SPIDR-205ENST00000518060 NFIXQ14938 502 aa13.99□□□□□ -0.17
SPIDR-205ENST00000518060 TBC1D2BQ9UPU7 963 aa13.99□□□□□ -0.17
SPIDR-205ENST00000518060 NPHP1O15259 732 aa13.98□□□□□ -0.17
SPIDR-205ENST00000518060 PIP4K2AP48426 406 aaPredicted RBP13.98□□□□□ -0.17
SPIDR-205ENST00000518060 EIF5P55010 431 aaKnown RBP13.98□□□□□ -0.17
SPIDR-205ENST00000518060 NFE2L2Q16236 605 aa13.98□□□□□ -0.17
SPIDR-205ENST00000518060 ZNF526Q8TF50 670 aaPredicted RBP13.98□□□□□ -0.17
SPIDR-205ENST00000518060 MIS18AQ9NYP9 233 aa13.98□□□□□ -0.17
SPIDR-205ENST00000518060 SIPA1L3O60292 1781 aaPredicted RBP13.98□□□□□ -0.17
SPIDR-205ENST00000518060 ATP10DQ9P241 1426 aa13.98□□□□□ -0.17
SPIDR-205ENST00000518060 MYBBP1AQ9BQG0 1328 aaKnown RBP13.97□□□□□ -0.17
SPIDR-205ENST00000518060 PRAMEF22A3QJZ6 481 aa13.97□□□□□ -0.17
SPIDR-205ENST00000518060 GIGYF1O75420 1035 aaPredicted RBP13.97□□□□□ -0.17
SPIDR-205ENST00000518060 SNRPA1P09661 255 aaKnown RBP13.97□□□□□ -0.17
SPIDR-205ENST00000518060 TM4SF1P30408 202 aa13.97□□□□□ -0.17
SPIDR-205ENST00000518060 CHRNA5P30532 468 aa13.97□□□□□ -0.17
SPIDR-205ENST00000518060 TAF7Q15545 349 aaPredicted RBP13.97□□□□□ -0.17
SPIDR-205ENST00000518060 ARHGAP27Q6ZUM4 889 aa13.97□□□□□ -0.17
SPIDR-205ENST00000518060 THUMPD2Q9BTF0 503 aaKnown RBP13.97□□□□□ -0.17
SPIDR-205ENST00000518060 SERPINB2P05120 415 aa13.96□□□□□ -0.17
SPIDR-205ENST00000518060 IL6STP40189 918 aaPredicted RBP13.96□□□□□ -0.17
SPIDR-205ENST00000518060 WDR43Q15061 677 aaKnown RBP eCLIP13.96□□□□□ -0.17
SPIDR-205ENST00000518060 BCL2L12Q9HB09 334 aa13.96□□□□□ -0.17
SPIDR-205ENST00000518060 PIM2Q9P1W9 311 aa13.96□□□□□ -0.17
SPIDR-205ENST00000518060 N4BP2Q86UW6 1770 aaPredicted RBP13.96□□□□□ -0.18
SPIDR-205ENST00000518060 DALRD3Q5D0E6 543 aaKnown RBP13.95□□□□□ -0.18
SPIDR-205ENST00000518060 DZIP3Q86Y13 1208 aaKnown RBP13.95□□□□□ -0.18
SPIDR-205ENST00000518060 PLEKHF1Q96S99 279 aa13.95□□□□□ -0.18
SPIDR-205ENST00000518060 USP16Q9Y5T5 823 aa13.95□□□□□ -0.18
SPIDR-205ENST00000518060 KIF13BQ9NQT8 1826 aa13.94□□□□□ -0.18
SPIDR-205ENST00000518060 TBC1D9BQ66K14 1250 aa13.94□□□□□ -0.18
SPIDR-205ENST00000518060 CCDC146Q8IYE0 955 aa13.94□□□□□ -0.18
SPIDR-205ENST00000518060 PNISRQ8TF01 805 aaKnown RBP13.94□□□□□ -0.18
SPIDR-205ENST00000518060 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
SPIDR-205ENST00000518060 RIPK4P57078 832 aa13.93□□□□□ -0.18
SPIDR-205ENST00000518060 GPBP1L1Q9HC44 474 aaPredicted RBP13.93□□□□□ -0.18
SPIDR-205ENST00000518060 RRP7AQ9Y3A4 280 aaKnown RBP13.93□□□□□ -0.18
SPIDR-205ENST00000518060 SCN7AQ01118 1682 aa13.92□□□□□ -0.18
SPIDR-205ENST00000518060 CAMTA2O94983 1202 aa13.92□□□□□ -0.18
SPIDR-205ENST00000518060 KCNA3P22001 575 aa13.92□□□□□ -0.18
SPIDR-205ENST00000518060 NEUROD2Q15784 382 aa13.92□□□□□ -0.18
SPIDR-205ENST00000518060 C2CD5Q86YS7 1000 aa13.92□□□□□ -0.18
SPIDR-205ENST00000518060 CCDC24Q8N4L8 307 aa13.92□□□□□ -0.18
SPIDR-205ENST00000518060 NGEFQ8N5V2 710 aa13.92□□□□□ -0.18
SPIDR-205ENST00000518060 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
SPIDR-205ENST00000518060 CARMIL3Q8ND23 1372 aa13.92□□□□□ -0.18
SPIDR-205ENST00000518060 H0YIN7 160 aa13.91□□□□□ -0.18
SPIDR-205ENST00000518060 LMOD3Q0VAK6 560 aa13.91□□□□□ -0.18
SPIDR-205ENST00000518060 CNBD1Q8NA66 436 aa13.91□□□□□ -0.18
SPIDR-205ENST00000518060 TSPYL4Q9UJ04 414 aa13.91□□□□□ -0.18
SPIDR-205ENST00000518060 ZNF652Q9Y2D9 606 aa13.91□□□□□ -0.18
SPIDR-205ENST00000518060 ZEB1P37275 1124 aaPredicted RBP13.9□□□□□ -0.18
SPIDR-205ENST00000518060 C1QTNF8P60827 252 aa13.9□□□□□ -0.18
SPIDR-205ENST00000518060 ST5P78524 1137 aa13.9□□□□□ -0.18
SPIDR-205ENST00000518060 ADCY9O60503 1353 aa13.9□□□□□ -0.18
SPIDR-205ENST00000518060 SENP3-EIF4A1A0A087X0R7 540 aa13.89□□□□□ -0.19
SPIDR-205ENST00000518060 NBPF26B4DH59 902 aa13.89□□□□□ -0.19
SPIDR-205ENST00000518060 PRR5LQ6MZQ0 368 aa13.89□□□□□ -0.19
SPIDR-205ENST00000518060 NBPF10Q6P3W6 841 aaKnown RBP13.89□□□□□ -0.19
SPIDR-205ENST00000518060 NBPF15Q8N660 670 aa13.89□□□□□ -0.19
SPIDR-205ENST00000518060 ZNF622Q969S3 477 aaKnown RBP eCLIP13.89□□□□□ -0.19
SPIDR-205ENST00000518060 FAM177BA6PVY3 158 aa13.88□□□□□ -0.19
SPIDR-205ENST00000518060 MYL6BP14649 208 aa13.88□□□□□ -0.19
SPIDR-205ENST00000518060 PDE6BP35913 854 aa13.88□□□□□ -0.19
SPIDR-205ENST00000518060 TMPOP42166 694 aaKnown RBP13.88□□□□□ -0.19
SPIDR-205ENST00000518060 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
SPIDR-205ENST00000518060 C9orf131Q5VYM1 1079 aa13.88□□□□□ -0.19
SPIDR-205ENST00000518060 NBPF5PQ86XG9 351 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-205ENST00000518060 PRKRIP1Q9H875 184 aaPredicted RBP13.88□□□□□ -0.19
SPIDR-205ENST00000518060 LAS1LQ9Y4W2 734 aaKnown RBP13.88□□□□□ -0.19
SPIDR-205ENST00000518060 KIF6Q6ZMV9 814 aa13.87□□□□□ -0.19
SPIDR-205ENST00000518060 TTLL6Q8N841 843 aa13.87□□□□□ -0.19
SPIDR-205ENST00000518060 RUNDC1Q96C34 613 aa13.87□□□□□ -0.19
SPIDR-205ENST00000518060 BRIP1Q9BX63 1249 aa13.87□□□□□ -0.19
SPIDR-205ENST00000518060 RNF181Q9P0P0 153 aa13.87□□□□□ -0.19
SPIDR-205ENST00000518060 ZNF219Q9P2Y4 722 aaPredicted RBP13.87□□□□□ -0.19
SPIDR-205ENST00000518060 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms