RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 POLRMTO00411 1230 aaKnown RBP23.23■■□□□ 1.31
CTNNA1-206ENST00000517980 PRKAR2BP31323 418 aa23.23■■□□□ 1.31
CTNNA1-206ENST00000517980 CFAP53Q96M91 514 aa23.23■■□□□ 1.31
CTNNA1-206ENST00000517980 ADCY9O60503 1353 aa23.23■■□□□ 1.31
CTNNA1-206ENST00000517980 CHRNA5P30532 468 aa23.22■■□□□ 1.31
CTNNA1-206ENST00000517980 VSIG10Q8N0Z9 540 aa23.22■■□□□ 1.31
CTNNA1-206ENST00000517980 ZNF496Q96IT1 587 aaPredicted RBP23.22■■□□□ 1.31
CTNNA1-206ENST00000517980 NARFQ9UHQ1 456 aa23.22■■□□□ 1.31
CTNNA1-206ENST00000517980 PPP2R1AP30153 589 aa23.21■■□□□ 1.31
CTNNA1-206ENST00000517980 RSPH6AQ9H0K4 717 aa23.21■■□□□ 1.31
CTNNA1-206ENST00000517980 PIM2Q9P1W9 311 aa23.21■■□□□ 1.31
CTNNA1-206ENST00000517980 BRCA1P38398 1863 aaKnown RBP23.2■■□□□ 1.3
CTNNA1-206ENST00000517980 KCNQ3O43525 872 aa23.2■■□□□ 1.3
CTNNA1-206ENST00000517980 NFIXQ14938 502 aa23.2■■□□□ 1.3
CTNNA1-206ENST00000517980 ZNF790Q6PG37 636 aa23.2■■□□□ 1.3
CTNNA1-206ENST00000517980 BCL2L12Q9HB09 334 aa23.2■■□□□ 1.3
CTNNA1-206ENST00000517980 COL15A1P39059 1388 aa23.19■■□□□ 1.3
CTNNA1-206ENST00000517980 STARD3NLO95772 234 aa23.19■■□□□ 1.3
CTNNA1-206ENST00000517980 U2AF1L5P0DN76 240 aaPredicted RBP23.19■■□□□ 1.3
CTNNA1-206ENST00000517980 U2AF1Q01081 240 aaKnown RBP eCLIP23.19■■□□□ 1.3
CTNNA1-206ENST00000517980 NUDCQ9Y266 331 aa23.19■■□□□ 1.3
CTNNA1-206ENST00000517980 AFDNP55196 1824 aaKnown RBP23.18■■□□□ 1.3
CTNNA1-206ENST00000517980 UBR2Q8IWV8 1755 aa23.18■■□□□ 1.3
CTNNA1-206ENST00000517980 DALRD3Q5D0E6 543 aaKnown RBP23.17■■□□□ 1.3
CTNNA1-206ENST00000517980 BICDL1Q6ZP65 573 aa23.17■■□□□ 1.3
CTNNA1-206ENST00000517980 ZNF330Q9Y3S2 320 aaPredicted RBP23.17■■□□□ 1.3
CTNNA1-206ENST00000517980 A1BGP04217 495 aa23.16■■□□□ 1.3
CTNNA1-206ENST00000517980 SERPINB2P05120 415 aa23.16■■□□□ 1.3
CTNNA1-206ENST00000517980 EIF5P55010 431 aaKnown RBP23.16■■□□□ 1.3
CTNNA1-206ENST00000517980 HEG1Q9ULI3 1381 aa23.15■■□□□ 1.3
CTNNA1-206ENST00000517980 SIPA1L3O60292 1781 aaPredicted RBP23.15■■□□□ 1.3
CTNNA1-206ENST00000517980 BTBD11A6QL63 1104 aa23.15■■□□□ 1.3
CTNNA1-206ENST00000517980 TBC1D2BQ9UPU7 963 aa23.15■■□□□ 1.3
CTNNA1-206ENST00000517980 ARFGEF1Q9Y6D6 1849 aa23.13■■□□□ 1.29
CTNNA1-206ENST00000517980 DCTN1Q14203 1278 aa23.13■■□□□ 1.29
CTNNA1-206ENST00000517980 C9orf131Q5VYM1 1079 aa23.13■■□□□ 1.29
CTNNA1-206ENST00000517980 MCM10Q7L590 875 aa23.13■■□□□ 1.29
CTNNA1-206ENST00000517980 FMNL2Q96PY5 1086 aa23.13■■□□□ 1.29
CTNNA1-206ENST00000517980 TEX13AQ9BXU3 409 aaPredicted RBP23.13■■□□□ 1.29
CTNNA1-206ENST00000517980 KIF3CO14782 793 aa23.12■■□□□ 1.29
CTNNA1-206ENST00000517980 CEMIPQ8WUJ3 1361 aa23.12■■□□□ 1.29
CTNNA1-206ENST00000517980 PIP4K2AP48426 406 aaPredicted RBP23.11■■□□□ 1.29
CTNNA1-206ENST00000517980 TBC1D9BQ66K14 1250 aa23.11■■□□□ 1.29
CTNNA1-206ENST00000517980 RTF1Q92541 710 aaKnown RBP23.11■■□□□ 1.29
CTNNA1-206ENST00000517980 USP16Q9Y5T5 823 aa23.11■■□□□ 1.29
CTNNA1-206ENST00000517980 A0A087WZG4 1122 aa23.1■■□□□ 1.29
CTNNA1-206ENST00000517980 PRAMEF22A3QJZ6 481 aa23.1■■□□□ 1.29
CTNNA1-206ENST00000517980 CCDC24Q8N4L8 307 aa23.1■■□□□ 1.29
CTNNA1-206ENST00000517980 CEP350Q5VT06 3117 aa23.1■■□□□ 1.29
CTNNA1-206ENST00000517980 SBF1O95248 1867 aa23.07■■□□□ 1.28
CTNNA1-206ENST00000517980 IL6STP40189 918 aaPredicted RBP23.07■■□□□ 1.28
CTNNA1-206ENST00000517980 C2CD5Q86YS7 1000 aa23.07■■□□□ 1.28
CTNNA1-206ENST00000517980 NMRK2Q9NPI5 230 aa23.07■■□□□ 1.28
CTNNA1-206ENST00000517980 NRXN2Q9P2S2 1712 aa23.06■■□□□ 1.28
CTNNA1-206ENST00000517980 MIS18AQ9NYP9 233 aa23.06■■□□□ 1.28
CTNNA1-206ENST00000517980 RNF181Q9P0P0 153 aa23.06■■□□□ 1.28
CTNNA1-206ENST00000517980 CARMIL3Q8ND23 1372 aa23.05■■□□□ 1.28
CTNNA1-206ENST00000517980 HSPA6P17066 643 aa23.05■■□□□ 1.28
CTNNA1-206ENST00000517980 NPM2Q86SE8 214 aaKnown RBP23.05■■□□□ 1.28
CTNNA1-206ENST00000517980 H0YIN7 160 aa23.04■■□□□ 1.28
CTNNA1-206ENST00000517980 RASSF7Q02833 373 aa23.04■■□□□ 1.28
CTNNA1-206ENST00000517980 CAMTA2O94983 1202 aa23.03■■□□□ 1.28
CTNNA1-206ENST00000517980 TTLL6Q8N841 843 aa23.03■■□□□ 1.28
CTNNA1-206ENST00000517980 CCDC88AQ3V6T2 1871 aa23.02■■□□□ 1.28
CTNNA1-206ENST00000517980 DZIP3Q86Y13 1208 aaKnown RBP23.02■■□□□ 1.28
CTNNA1-206ENST00000517980 ZNF622Q969S3 477 aaKnown RBP eCLIP23.02■■□□□ 1.28
CTNNA1-206ENST00000517980 ZNF219Q9P2Y4 722 aaPredicted RBP23.02■■□□□ 1.28
CTNNA1-206ENST00000517980 HTATSF1O43719 755 aaKnown RBP23.01■■□□□ 1.27
CTNNA1-206ENST00000517980 SNRPA1P09661 255 aaKnown RBP23.01■■□□□ 1.27
CTNNA1-206ENST00000517980 TAF7Q15545 349 aaPredicted RBP23.01■■□□□ 1.27
CTNNA1-206ENST00000517980 SETDB2Q96T68 719 aa23.01■■□□□ 1.27
CTNNA1-206ENST00000517980 PRELPP51888 382 aa23■■□□□ 1.27
CTNNA1-206ENST00000517980 PRR5LQ6MZQ0 368 aa23■■□□□ 1.27
CTNNA1-206ENST00000517980 ANKRD31Q8N7Z5 1873 aa23■■□□□ 1.27
CTNNA1-206ENST00000517980 DLG5Q8TDM6 1919 aa23■■□□□ 1.27
CTNNA1-206ENST00000517980 TOMM70O94826 608 aa22.99■■□□□ 1.27
CTNNA1-206ENST00000517980 BRIP1Q9BX63 1249 aa22.99■■□□□ 1.27
CTNNA1-206ENST00000517980 RRAGCQ9HB90 399 aa22.99■■□□□ 1.27
CTNNA1-206ENST00000517980 NPHP1O15259 732 aa22.98■■□□□ 1.27
CTNNA1-206ENST00000517980 DLEC1Q9Y238 1755 aa22.97■■□□□ 1.27
CTNNA1-206ENST00000517980 NBPF26B4DH59 902 aa22.97■■□□□ 1.27
CTNNA1-206ENST00000517980 NEFMP07197 916 aa22.97■■□□□ 1.27
CTNNA1-206ENST00000517980 PDE6BP35913 854 aa22.97■■□□□ 1.27
CTNNA1-206ENST00000517980 NBPF10Q6P3W6 841 aaKnown RBP22.97■■□□□ 1.27
CTNNA1-206ENST00000517980 NBPF15Q8N660 670 aa22.97■■□□□ 1.27
CTNNA1-206ENST00000517980 PLEKHF1Q96S99 279 aa22.97■■□□□ 1.27
CTNNA1-206ENST00000517980 THUMPD2Q9BTF0 503 aaKnown RBP22.96■■□□□ 1.27
CTNNA1-206ENST00000517980 SCN7AQ01118 1682 aa22.96■■□□□ 1.27
CTNNA1-206ENST00000517980 C21orf2O43822 256 aa22.95■■□□□ 1.26
CTNNA1-206ENST00000517980 KDM2BQ8NHM5 1336 aa22.94■■□□□ 1.26
CTNNA1-206ENST00000517980 LMNB1P20700 586 aa22.94■■□□□ 1.26
CTNNA1-206ENST00000517980 C16orf71Q8IYS4 520 aaPredicted RBP22.94■■□□□ 1.26
CTNNA1-206ENST00000517980 NGEFQ8N5V2 710 aa22.94■■□□□ 1.26
CTNNA1-206ENST00000517980 CNBD1Q8NA66 436 aa22.94■■□□□ 1.26
CTNNA1-206ENST00000517980 FAM177BA6PVY3 158 aa22.93■■□□□ 1.26
CTNNA1-206ENST00000517980 NFKBIEO00221 500 aa22.93■■□□□ 1.26
CTNNA1-206ENST00000517980 NFE2L2Q16236 605 aa22.92■■□□□ 1.26
CTNNA1-206ENST00000517980 CACNA1SQ13698 1873 aa22.92■■□□□ 1.26
CTNNA1-206ENST00000517980 ST5P78524 1137 aa22.91■■□□□ 1.26
CTNNA1-206ENST00000517980 HLFQ16534 295 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms