RNA–Protein interactions for RNA: ENST00000517924.5

LAPTM4B-202, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 5

Gene LAPTM4B, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-202ENST00000517924 RTF1Q92541 710 aaKnown RBP32.81■■■□□ 2.84
LAPTM4B-202ENST00000517924 COL15A1P39059 1388 aa32.8■■■□□ 2.84
LAPTM4B-202ENST00000517924 CANXP27824 592 aaKnown RBP32.78■■■□□ 2.84
LAPTM4B-202ENST00000517924 USPL1Q5W0Q7 1092 aa32.78■■■□□ 2.84
LAPTM4B-202ENST00000517924 C10orf71Q711Q0 1435 aa32.77■■■□□ 2.84
LAPTM4B-202ENST00000517924 FMNL2Q96PY5 1086 aa32.77■■■□□ 2.84
LAPTM4B-202ENST00000517924 PXDNLA1KZ92 1463 aa32.76■■■□□ 2.84
LAPTM4B-202ENST00000517924 DDR1Q08345 913 aa32.76■■■□□ 2.83
LAPTM4B-202ENST00000517924 STARD3NLO95772 234 aa32.75■■■□□ 2.83
LAPTM4B-202ENST00000517924 PARP3Q9Y6F1 533 aa32.75■■■□□ 2.83
LAPTM4B-202ENST00000517924 MYBBP1AQ9BQG0 1328 aaKnown RBP32.75■■■□□ 2.83
LAPTM4B-202ENST00000517924 HTATSF1O43719 755 aaKnown RBP32.74■■■□□ 2.83
LAPTM4B-202ENST00000517924 ZPR1O75312 459 aa32.74■■■□□ 2.83
LAPTM4B-202ENST00000517924 PRAMEF22A3QJZ6 481 aa32.73■■■□□ 2.83
LAPTM4B-202ENST00000517924 AFDNP55196 1824 aaKnown RBP32.72■■■□□ 2.83
LAPTM4B-202ENST00000517924 NARFQ9UHQ1 456 aa32.72■■■□□ 2.83
LAPTM4B-202ENST00000517924 NEFMP07197 916 aa32.71■■■□□ 2.83
LAPTM4B-202ENST00000517924 EIF5P55010 431 aaKnown RBP32.71■■■□□ 2.83
LAPTM4B-202ENST00000517924 NFE2L2Q16236 605 aa32.71■■■□□ 2.83
LAPTM4B-202ENST00000517924 THUMPD2Q9BTF0 503 aaKnown RBP32.71■■■□□ 2.83
LAPTM4B-202ENST00000517924 BCL2L12Q9HB09 334 aa32.71■■■□□ 2.83
LAPTM4B-202ENST00000517924 MIS18AQ9NYP9 233 aa32.71■■■□□ 2.83
LAPTM4B-202ENST00000517924 A1BGP04217 495 aa32.7■■■□□ 2.83
LAPTM4B-202ENST00000517924 TM4SF1P30408 202 aa32.7■■■□□ 2.83
LAPTM4B-202ENST00000517924 TEX13AQ9BXU3 409 aaPredicted RBP32.7■■■□□ 2.83
LAPTM4B-202ENST00000517924 BRCA1P38398 1863 aaKnown RBP32.69■■■□□ 2.82
LAPTM4B-202ENST00000517924 KDM3BQ7LBC6 1761 aa32.69■■■□□ 2.82
LAPTM4B-202ENST00000517924 A0A0G2JLW4 131 aa32.69■■■□□ 2.82
LAPTM4B-202ENST00000517924 GRIN3BO60391 1043 aa32.69■■■□□ 2.82
LAPTM4B-202ENST00000517924 ZNF784Q8NCA9 323 aaPredicted RBP32.69■■■□□ 2.82
LAPTM4B-202ENST00000517924 USP16Q9Y5T5 823 aa32.69■■■□□ 2.82
LAPTM4B-202ENST00000517924 POLRMTO00411 1230 aaKnown RBP32.68■■■□□ 2.82
LAPTM4B-202ENST00000517924 SCN7AQ01118 1682 aa32.67■■■□□ 2.82
LAPTM4B-202ENST00000517924 TAF7Q15545 349 aaPredicted RBP32.67■■■□□ 2.82
LAPTM4B-202ENST00000517924 ZNF330Q9Y3S2 320 aaPredicted RBP32.67■■■□□ 2.82
LAPTM4B-202ENST00000517924 MAPK8IP3Q9UPT6 1336 aa32.67■■■□□ 2.82
LAPTM4B-202ENST00000517924 PIP4K2AP48426 406 aaPredicted RBP32.66■■■□□ 2.82
LAPTM4B-202ENST00000517924 NFIXQ14938 502 aa32.66■■■□□ 2.82
LAPTM4B-202ENST00000517924 DPEP1P16444 411 aa32.65■■■□□ 2.82
LAPTM4B-202ENST00000517924 NRXN2Q9P2S2 1712 aa32.65■■■□□ 2.82
LAPTM4B-202ENST00000517924 TGFB2P61812 414 aa32.64■■■□□ 2.82
LAPTM4B-202ENST00000517924 PNNQ9H307 717 aaKnown RBP32.63■■■□□ 2.81
LAPTM4B-202ENST00000517924 PRKRIP1Q9H875 184 aaPredicted RBP32.63■■■□□ 2.81
LAPTM4B-202ENST00000517924 TBC1D2BQ9UPU7 963 aa32.63■■■□□ 2.81
LAPTM4B-202ENST00000517924 LAMB4A4D0S4 1761 aa32.61■■■□□ 2.81
LAPTM4B-202ENST00000517924 BCORQ6W2J9 1755 aa32.61■■■□□ 2.81
LAPTM4B-202ENST00000517924 SNRPA1P09661 255 aaKnown RBP32.61■■■□□ 2.81
LAPTM4B-202ENST00000517924 ZEB1P37275 1124 aaPredicted RBP32.61■■■□□ 2.81
LAPTM4B-202ENST00000517924 IL6STP40189 918 aaPredicted RBP32.61■■■□□ 2.81
LAPTM4B-202ENST00000517924 CCDC146Q8IYE0 955 aa32.61■■■□□ 2.81
LAPTM4B-202ENST00000517924 KCNA3P22001 575 aa32.6■■■□□ 2.81
LAPTM4B-202ENST00000517924 A0A087WZG4 1122 aa32.59■■■□□ 2.81
LAPTM4B-202ENST00000517924 BICDL1Q6ZP65 573 aa32.59■■■□□ 2.81
LAPTM4B-202ENST00000517924 TBC1D9BQ66K14 1250 aa32.57■■■□□ 2.8
LAPTM4B-202ENST00000517924 BCS1LQ9Y276 419 aa32.57■■■□□ 2.8
LAPTM4B-202ENST00000517924 RIPK4P57078 832 aa32.56■■■□□ 2.8
LAPTM4B-202ENST00000517924 RRP7AQ9Y3A4 280 aaKnown RBP32.56■■■□□ 2.8
LAPTM4B-202ENST00000517924 NBPF26B4DH59 902 aa32.55■■■□□ 2.8
LAPTM4B-202ENST00000517924 SERPINB2P05120 415 aa32.55■■■□□ 2.8
LAPTM4B-202ENST00000517924 CHRNA5P30532 468 aa32.55■■■□□ 2.8
LAPTM4B-202ENST00000517924 TMPOP42166 694 aaKnown RBP32.55■■■□□ 2.8
LAPTM4B-202ENST00000517924 NBPF10Q6P3W6 841 aaKnown RBP32.55■■■□□ 2.8
LAPTM4B-202ENST00000517924 NBPF15Q8N660 670 aa32.55■■■□□ 2.8
LAPTM4B-202ENST00000517924 ARFGEF1Q9Y6D6 1849 aa32.55■■■□□ 2.8
LAPTM4B-202ENST00000517924 CAMTA2O94983 1202 aa32.54■■■□□ 2.8
LAPTM4B-202ENST00000517924 PNISRQ8TF01 805 aaKnown RBP32.53■■■□□ 2.8
LAPTM4B-202ENST00000517924 ADAMTS8Q9UP79 889 aa32.53■■■□□ 2.8
LAPTM4B-202ENST00000517924 CARMIL3Q8ND23 1372 aa32.53■■■□□ 2.8
LAPTM4B-202ENST00000517924 ANKRD31Q8N7Z5 1873 aa32.52■■■□□ 2.8
LAPTM4B-202ENST00000517924 EIF4A1P60842 406 aaKnown RBP32.52■■■□□ 2.8
LAPTM4B-202ENST00000517924 WDR43Q15061 677 aaKnown RBP eCLIP32.52■■■□□ 2.8
LAPTM4B-202ENST00000517924 DZIP3Q86Y13 1208 aaKnown RBP32.52■■■□□ 2.8
LAPTM4B-202ENST00000517924 NEUROD2Q15784 382 aa32.5■■■□□ 2.79
LAPTM4B-202ENST00000517924 DLEC1Q9Y238 1755 aa32.5■■■□□ 2.79
LAPTM4B-202ENST00000517924 GIGYF1O75420 1035 aaPredicted RBP32.49■■■□□ 2.79
LAPTM4B-202ENST00000517924 NPM2Q86SE8 214 aaKnown RBP32.49■■■□□ 2.79
LAPTM4B-202ENST00000517924 RUNDC1Q96C34 613 aa32.47■■■□□ 2.79
LAPTM4B-202ENST00000517924 PIM2Q9P1W9 311 aa32.47■■■□□ 2.79
LAPTM4B-202ENST00000517924 CCDC24Q8N4L8 307 aa32.46■■■□□ 2.79
LAPTM4B-202ENST00000517924 ADCY9O60503 1353 aa32.45■■■□□ 2.79
LAPTM4B-202ENST00000517924 ATP10DQ9P241 1426 aa32.45■■■□□ 2.79
LAPTM4B-202ENST00000517924 TSPYL4Q9UJ04 414 aa32.45■■■□□ 2.79
LAPTM4B-202ENST00000517924 ARHGAP27Q6ZUM4 889 aa32.43■■■□□ 2.78
LAPTM4B-202ENST00000517924 TRIM35Q9UPQ4 493 aa32.43■■■□□ 2.78
LAPTM4B-202ENST00000517924 COL11A2P13942 1736 aaPredicted RBP32.43■■■□□ 2.78
LAPTM4B-202ENST00000517924 LMOD3Q0VAK6 560 aa32.42■■■□□ 2.78
LAPTM4B-202ENST00000517924 DALRD3Q5D0E6 543 aaKnown RBP32.42■■■□□ 2.78
LAPTM4B-202ENST00000517924 PRR5LQ6MZQ0 368 aa32.41■■■□□ 2.78
LAPTM4B-202ENST00000517924 SETDB2Q96T68 719 aa32.41■■■□□ 2.78
LAPTM4B-202ENST00000517924 CCDC184Q52MB2 194 aa32.4■■■□□ 2.78
LAPTM4B-202ENST00000517924 NGEFQ8N5V2 710 aa32.4■■■□□ 2.78
LAPTM4B-202ENST00000517924 NUP98P52948 1817 aa32.39■■■□□ 2.78
LAPTM4B-202ENST00000517924 ZNF316A6NFI3 1004 aaPredicted RBP32.38■■■□□ 2.77
LAPTM4B-202ENST00000517924 C2CD5Q86YS7 1000 aa32.38■■■□□ 2.77
LAPTM4B-202ENST00000517924 HLFQ16534 295 aa32.37■■■□□ 2.77
LAPTM4B-202ENST00000517924 MYL6BP14649 208 aa32.36■■■□□ 2.77
LAPTM4B-202ENST00000517924 CLEC4GQ6UXB4 293 aa32.36■■■□□ 2.77
LAPTM4B-202ENST00000517924 ZNF526Q8TF50 670 aaPredicted RBP32.36■■■□□ 2.77
LAPTM4B-202ENST00000517924 SBF1O95248 1867 aa32.35■■■□□ 2.77
LAPTM4B-202ENST00000517924 CNBD1Q8NA66 436 aa32.35■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms