RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 BRPF1P55201 1214 aaPredicted RBP5.77□□□□□ -1.49
CPNE3-204ENST00000517862 RBM46Q8TBY0 533 aaKnown RBP5.77□□□□□ -1.49
CPNE3-204ENST00000517862 C19orf44Q9H6X5 657 aa5.77□□□□□ -1.49
CPNE3-204ENST00000517862 DPYSL4O14531 572 aa5.76□□□□□ -1.49
CPNE3-204ENST00000517862 LBX1P52954 281 aa5.76□□□□□ -1.49
CPNE3-204ENST00000517862 FSTL1Q12841 308 aa5.76□□□□□ -1.49
CPNE3-204ENST00000517862 WHAMMQ8TF30 809 aa5.76□□□□□ -1.49
CPNE3-204ENST00000517862 AIDAQ96BJ3 306 aa5.76□□□□□ -1.49
CPNE3-204ENST00000517862 UBR1Q8IWV7 1749 aa5.75□□□□□ -1.49
CPNE3-204ENST00000517862 ARHGEF28Q8N1W1 1705 aaKnown RBP5.75□□□□□ -1.49
CPNE3-204ENST00000517862 C16orf71Q8IYS4 520 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-204ENST00000517862 COL25A1Q9BXS0 654 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-204ENST00000517862 MTFR1LQ9H019 292 aa5.75□□□□□ -1.49
CPNE3-204ENST00000517862 KIF27Q86VH2 1401 aa5.74□□□□□ -1.49
CPNE3-204ENST00000517862 PKD1L2Q7Z442 2459 aa5.74□□□□□ -1.49
CPNE3-204ENST00000517862 FXR1P51114 621 aaKnown RBP eCLIP5.74□□□□□ -1.49
CPNE3-204ENST00000517862 NEUROD2Q15784 382 aa5.74□□□□□ -1.49
CPNE3-204ENST00000517862 VPS72Q15906 364 aa5.74□□□□□ -1.49
CPNE3-204ENST00000517862 ZC3H15Q8WU90 426 aaKnown RBP5.74□□□□□ -1.49
CPNE3-204ENST00000517862 WASF2Q9Y6W5 498 aa5.74□□□□□ -1.49
CPNE3-204ENST00000517862 CROCC2H7BZ55 1655 aa5.74□□□□□ -1.49
CPNE3-204ENST00000517862 TMEM131LA2VDJ0 1609 aa5.74□□□□□ -1.49
CPNE3-204ENST00000517862 ABCC5O15440 1437 aa5.74□□□□□ -1.49
CPNE3-204ENST00000517862 NCOA3Q9Y6Q9 1424 aa5.74□□□□□ -1.49
CPNE3-204ENST00000517862 SEMA3EO15041 775 aa5.73□□□□□ -1.49
CPNE3-204ENST00000517862 MAN1A2O60476 641 aa5.73□□□□□ -1.49
CPNE3-204ENST00000517862 MAP3K10Q02779 954 aa5.73□□□□□ -1.49
CPNE3-204ENST00000517862 ZMYM1Q5SVZ6 1142 aa5.73□□□□□ -1.49
CPNE3-204ENST00000517862 KRTAP17-1Q9BYP8 105 aa5.73□□□□□ -1.49
CPNE3-204ENST00000517862 SLC24A3Q9HC58 644 aa5.73□□□□□ -1.49
CPNE3-204ENST00000517862 SLIT1O75093 1534 aa5.73□□□□□ -1.49
CPNE3-204ENST00000517862 SLIT2O94813 1529 aa5.73□□□□□ -1.49
CPNE3-204ENST00000517862 ARHGAP5Q13017 1502 aa5.73□□□□□ -1.49
CPNE3-204ENST00000517862 RC3H1Q5TC82 1133 aaKnown RBP5.72□□□□□ -1.49
CPNE3-204ENST00000517862 MRPL14Q6P1L8 145 aaKnown RBP5.72□□□□□ -1.49
CPNE3-204ENST00000517862 PURBQ96QR8 312 aaKnown RBP5.72□□□□□ -1.49
CPNE3-204ENST00000517862 COL22A1Q8NFW1 1626 aaPredicted RBP5.72□□□□□ -1.49
CPNE3-204ENST00000517862 GPATCH8Q9UKJ3 1502 aaKnown RBP5.72□□□□□ -1.49
CPNE3-204ENST00000517862 SCO2A0A1W2PP80 73 aa5.71□□□□□ -1.5
CPNE3-204ENST00000517862 FAM196AQ6ZSG2 479 aa5.71□□□□□ -1.5
CPNE3-204ENST00000517862 ERICH6Q7L0X2 663 aa5.71□□□□□ -1.5
CPNE3-204ENST00000517862 PODNQ7Z5L7 613 aa5.71□□□□□ -1.5
CPNE3-204ENST00000517862 GPR161Q8N6U8 529 aaKnown RBP5.71□□□□□ -1.5
CPNE3-204ENST00000517862 NLGN2Q8NFZ4 835 aa5.71□□□□□ -1.5
CPNE3-204ENST00000517862 EYA1Q99502 592 aa5.71□□□□□ -1.5
CPNE3-204ENST00000517862 NMRK2Q9NPI5 230 aa5.71□□□□□ -1.5
CPNE3-204ENST00000517862 CHD2O14647 1828 aaKnown RBP5.71□□□□□ -1.5
CPNE3-204ENST00000517862 PLXNC1O60486 1568 aa5.71□□□□□ -1.5
CPNE3-204ENST00000517862 SAMD9Q5K651 1589 aa5.71□□□□□ -1.5
CPNE3-204ENST00000517862 NUP153P49790 1475 aaKnown RBP5.71□□□□□ -1.5
CPNE3-204ENST00000517862 MYOM2P54296 1465 aa5.71□□□□□ -1.5
CPNE3-204ENST00000517862 DNAJB2P25686 324 aa5.7□□□□□ -1.5
CPNE3-204ENST00000517862 PADI6Q6TGC4 694 aa5.7□□□□□ -1.5
CPNE3-204ENST00000517862 TET3O43151 1660 aa5.69□□□□□ -1.5
CPNE3-204ENST00000517862 TESPA1A2RU30 521 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-204ENST00000517862 SUPT5HO00267 1087 aaKnown RBP5.69□□□□□ -1.5
CPNE3-204ENST00000517862 E2F4Q16254 413 aa5.69□□□□□ -1.5
CPNE3-204ENST00000517862 PUS10Q3MIT2 529 aaKnown RBP5.69□□□□□ -1.5
CPNE3-204ENST00000517862 TTC13Q8NBP0 860 aa5.69□□□□□ -1.5
CPNE3-204ENST00000517862 COL26A1Q96A83 441 aa5.69□□□□□ -1.5
CPNE3-204ENST00000517862 ENAMQ9NRM1 1142 aa5.69□□□□□ -1.5
CPNE3-204ENST00000517862 IGSF5Q9NSI5 407 aa5.69□□□□□ -1.5
CPNE3-204ENST00000517862 USP32Q8NFA0 1604 aa5.69□□□□□ -1.5
CPNE3-204ENST00000517862 CTTNBP2Q8WZ74 1663 aa5.69□□□□□ -1.5
CPNE3-204ENST00000517862 TULP4Q9NRJ4 1543 aa5.69□□□□□ -1.5
CPNE3-204ENST00000517862 PLA2G5P39877 138 aa5.68□□□□□ -1.5
CPNE3-204ENST00000517862 ARHGEF1Q92888 912 aaKnown RBP5.68□□□□□ -1.5
CPNE3-204ENST00000517862 CACNA1GO43497 2377 aa5.68□□□□□ -1.5
CPNE3-204ENST00000517862 COL6A3P12111 3177 aa5.68□□□□□ -1.5
CPNE3-204ENST00000517862 MST1RQ04912 1400 aa5.67□□□□□ -1.5
CPNE3-204ENST00000517862 FMNL1O95466 1100 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-204ENST00000517862 WNT7BP56706 349 aa5.67□□□□□ -1.5
CPNE3-204ENST00000517862 LAMC2Q13753 1193 aa5.67□□□□□ -1.5
CPNE3-204ENST00000517862 HOMEZQ8IX15 550 aa5.67□□□□□ -1.5
CPNE3-204ENST00000517862 BEND7Q8N7W2 519 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-204ENST00000517862 FAM122AQ96E09 287 aa5.67□□□□□ -1.5
CPNE3-204ENST00000517862 PRDM6Q9NQX0 595 aa5.67□□□□□ -1.5
CPNE3-204ENST00000517862 SOS2Q07890 1332 aaPredicted RBP5.67□□□□□ -1.5
CPNE3-204ENST00000517862 WASHC2CQ9Y4E1 1318 aa5.67□□□□□ -1.5
CPNE3-204ENST00000517862 ADAMTS7Q9UKP4 1686 aa5.66□□□□□ -1.5
CPNE3-204ENST00000517862 CFAP65Q6ZU64 1925 aaKnown RBP5.66□□□□□ -1.5
CPNE3-204ENST00000517862 HSPA8P11142 646 aaKnown RBP5.66□□□□□ -1.5
CPNE3-204ENST00000517862 NBPF11Q86T75 865 aa5.66□□□□□ -1.5
CPNE3-204ENST00000517862 FAM160A2Q8N612 972 aaPredicted RBP5.66□□□□□ -1.5
CPNE3-204ENST00000517862 SMC1BQ8NDV3 1235 aa5.66□□□□□ -1.5
CPNE3-204ENST00000517862 CDHR5Q9HBB8 845 aa5.66□□□□□ -1.5
CPNE3-204ENST00000517862 PRDM9Q9NQV7 894 aa5.66□□□□□ -1.5
CPNE3-204ENST00000517862 DAXXQ9UER7 740 aaPredicted RBP5.66□□□□□ -1.5
CPNE3-204ENST00000517862 MKRN1Q9UHC7 482 aaKnown RBP5.66□□□□□ -1.5
CPNE3-204ENST00000517862 SPAG9O60271 1321 aaKnown RBP5.66□□□□□ -1.5
CPNE3-204ENST00000517862 CNTNAP5Q8WYK1 1306 aa5.66□□□□□ -1.5
CPNE3-204ENST00000517862 MEGF6O75095 1541 aa5.65□□□□□ -1.5
CPNE3-204ENST00000517862 NEXMIFQ5QGS0 1516 aa5.65□□□□□ -1.5
CPNE3-204ENST00000517862 EHBP1L1Q8N3D4 1523 aa5.65□□□□□ -1.5
CPNE3-204ENST00000517862 SOX10P56693 466 aa5.65□□□□□ -1.5
CPNE3-204ENST00000517862 RNFT1Q5M7Z0 435 aa5.65□□□□□ -1.5
CPNE3-204ENST00000517862 NBPF15Q8N660 670 aa5.65□□□□□ -1.5
CPNE3-204ENST00000517862 TMEM134Q9H6X4 195 aa5.65□□□□□ -1.5
CPNE3-204ENST00000517862 STK32BQ9NY57 414 aa5.65□□□□□ -1.5
CPNE3-204ENST00000517862 UNC79Q9P2D8 2635 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms