RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 CNGB1Q14028 1251 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-204ENST00000517656 USPL1Q5W0Q7 1092 aa11.35□□□□□ -0.59
CTNNA1-204ENST00000517656 NARFQ9UHQ1 456 aa11.35□□□□□ -0.59
CTNNA1-204ENST00000517656 ZBTB1Q9Y2K1 713 aa11.35□□□□□ -0.59
CTNNA1-204ENST00000517656 COL15A1P39059 1388 aa11.35□□□□□ -0.59
CTNNA1-204ENST00000517656 N4BP2Q86UW6 1770 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-204ENST00000517656 GNAT3A8MTJ3 354 aa11.34□□□□□ -0.59
CTNNA1-204ENST00000517656 TTC5Q8N0Z6 440 aa11.34□□□□□ -0.59
CTNNA1-204ENST00000517656 PIM2Q9P1W9 311 aa11.34□□□□□ -0.59
CTNNA1-204ENST00000517656 TEFQ10587 303 aa11.33□□□□□ -0.6
CTNNA1-204ENST00000517656 DALRD3Q5D0E6 543 aaKnown RBP11.33□□□□□ -0.6
CTNNA1-204ENST00000517656 ARHGAP27Q6ZUM4 889 aa11.33□□□□□ -0.6
CTNNA1-204ENST00000517656 IL17REQ8NFR9 667 aa11.33□□□□□ -0.6
CTNNA1-204ENST00000517656 UBR2Q8IWV8 1755 aa11.33□□□□□ -0.6
CTNNA1-204ENST00000517656 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-204ENST00000517656 KIF3CO14782 793 aa11.32□□□□□ -0.6
CTNNA1-204ENST00000517656 STARD3NLO95772 234 aa11.32□□□□□ -0.6
CTNNA1-204ENST00000517656 NFIXQ14938 502 aa11.32□□□□□ -0.6
CTNNA1-204ENST00000517656 ZNF790Q6PG37 636 aa11.32□□□□□ -0.6
CTNNA1-204ENST00000517656 CFAP53Q96M91 514 aa11.32□□□□□ -0.6
CTNNA1-204ENST00000517656 BCL2L12Q9HB09 334 aa11.32□□□□□ -0.6
CTNNA1-204ENST00000517656 CEMIPQ8WUJ3 1361 aa11.31□□□□□ -0.6
CTNNA1-204ENST00000517656 HEG1Q9ULI3 1381 aa11.31□□□□□ -0.6
CTNNA1-204ENST00000517656 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-204ENST00000517656 CHRNA5P30532 468 aa11.31□□□□□ -0.6
CTNNA1-204ENST00000517656 EIF5P55010 431 aaKnown RBP11.31□□□□□ -0.6
CTNNA1-204ENST00000517656 ZNF496Q96IT1 587 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-204ENST00000517656 TEX13AQ9BXU3 409 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-204ENST00000517656 RSPH6AQ9H0K4 717 aa11.31□□□□□ -0.6
CTNNA1-204ENST00000517656 VIRMAQ69YN4 1812 aaKnown RBP11.3□□□□□ -0.6
CTNNA1-204ENST00000517656 A0A087WZG4 1122 aa11.3□□□□□ -0.6
CTNNA1-204ENST00000517656 HSPA6P17066 643 aa11.3□□□□□ -0.6
CTNNA1-204ENST00000517656 PRKAR2BP31323 418 aa11.3□□□□□ -0.6
CTNNA1-204ENST00000517656 PHACTR3Q96KR7 559 aa11.3□□□□□ -0.6
CTNNA1-204ENST00000517656 NUDCQ9Y266 331 aa11.3□□□□□ -0.6
CTNNA1-204ENST00000517656 SERPINB2P05120 415 aa11.29□□□□□ -0.6
CTNNA1-204ENST00000517656 PPP2R1AP30153 589 aa11.29□□□□□ -0.6
CTNNA1-204ENST00000517656 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
CTNNA1-204ENST00000517656 FMNL2Q96PY5 1086 aa11.29□□□□□ -0.6
CTNNA1-204ENST00000517656 ARFGEF1Q9Y6D6 1849 aa11.29□□□□□ -0.6
CTNNA1-204ENST00000517656 NRXN2Q9P2S2 1712 aa11.29□□□□□ -0.6
CTNNA1-204ENST00000517656 SIPA1L3O60292 1781 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-204ENST00000517656 BTBD11A6QL63 1104 aa11.28□□□□□ -0.6
CTNNA1-204ENST00000517656 IL6STP40189 918 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-204ENST00000517656 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-204ENST00000517656 U2AF1L5P0DN76 240 aaPredicted RBP11.27□□□□□ -0.61
CTNNA1-204ENST00000517656 U2AF1Q01081 240 aaKnown RBP eCLIP11.27□□□□□ -0.61
CTNNA1-204ENST00000517656 CARMIL3Q8ND23 1372 aa11.27□□□□□ -0.61
CTNNA1-204ENST00000517656 KCNQ3O43525 872 aa11.26□□□□□ -0.61
CTNNA1-204ENST00000517656 TOMM70O94826 608 aa11.26□□□□□ -0.61
CTNNA1-204ENST00000517656 TBC1D9BQ66K14 1250 aa11.26□□□□□ -0.61
CTNNA1-204ENST00000517656 C2CD5Q86YS7 1000 aa11.26□□□□□ -0.61
CTNNA1-204ENST00000517656 RTF1Q92541 710 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-204ENST00000517656 NMRK2Q9NPI5 230 aa11.26□□□□□ -0.61
CTNNA1-204ENST00000517656 RNF181Q9P0P0 153 aa11.26□□□□□ -0.61
CTNNA1-204ENST00000517656 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-204ENST00000517656 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
CTNNA1-204ENST00000517656 H0YIN7 160 aa11.25□□□□□ -0.61
CTNNA1-204ENST00000517656 A1BGP04217 495 aa11.25□□□□□ -0.61
CTNNA1-204ENST00000517656 BICDL1Q6ZP65 573 aa11.25□□□□□ -0.61
CTNNA1-204ENST00000517656 TTLL6Q8N841 843 aa11.25□□□□□ -0.61
CTNNA1-204ENST00000517656 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
CTNNA1-204ENST00000517656 ZNF330Q9Y3S2 320 aaPredicted RBP11.25□□□□□ -0.61
CTNNA1-204ENST00000517656 HTATSF1O43719 755 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-204ENST00000517656 CAMTA2O94983 1202 aa11.24□□□□□ -0.61
CTNNA1-204ENST00000517656 MCM10Q7L590 875 aa11.24□□□□□ -0.61
CTNNA1-204ENST00000517656 NPM2Q86SE8 214 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-204ENST00000517656 BRIP1Q9BX63 1249 aa11.24□□□□□ -0.61
CTNNA1-204ENST00000517656 PDZRN3Q9UPQ7 1066 aa11.24□□□□□ -0.61
CTNNA1-204ENST00000517656 KDM2BQ8NHM5 1336 aa11.24□□□□□ -0.61
CTNNA1-204ENST00000517656 ZC3H4Q9UPT8 1303 aaKnown RBP11.24□□□□□ -0.61
CTNNA1-204ENST00000517656 DLEC1Q9Y238 1755 aa11.23□□□□□ -0.61
CTNNA1-204ENST00000517656 PDE6BP35913 854 aa11.23□□□□□ -0.61
CTNNA1-204ENST00000517656 RASSF7Q02833 373 aa11.23□□□□□ -0.61
CTNNA1-204ENST00000517656 PRR5LQ6MZQ0 368 aa11.23□□□□□ -0.61
CTNNA1-204ENST00000517656 RBM46Q8TBY0 533 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-204ENST00000517656 USP16Q9Y5T5 823 aa11.23□□□□□ -0.61
CTNNA1-204ENST00000517656 PRAMEF22A3QJZ6 481 aa11.22□□□□□ -0.61
CTNNA1-204ENST00000517656 SNRPA1P09661 255 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-204ENST00000517656 LMNB1P20700 586 aa11.22□□□□□ -0.61
CTNNA1-204ENST00000517656 APLP1P51693 650 aa11.22□□□□□ -0.61
CTNNA1-204ENST00000517656 DCTN1Q14203 1278 aa11.22□□□□□ -0.61
CTNNA1-204ENST00000517656 DZIP3Q86Y13 1208 aaKnown RBP11.22□□□□□ -0.61
CTNNA1-204ENST00000517656 SETDB2Q96T68 719 aa11.22□□□□□ -0.61
CTNNA1-204ENST00000517656 NFKBIEO00221 500 aa11.21□□□□□ -0.61
CTNNA1-204ENST00000517656 PRELPP51888 382 aa11.21□□□□□ -0.61
CTNNA1-204ENST00000517656 CLEC4GQ6UXB4 293 aa11.21□□□□□ -0.61
CTNNA1-204ENST00000517656 C16orf71Q8IYS4 520 aaPredicted RBP11.21□□□□□ -0.61
CTNNA1-204ENST00000517656 CNBD1Q8NA66 436 aa11.21□□□□□ -0.61
CTNNA1-204ENST00000517656 ZNF622Q969S3 477 aaKnown RBP eCLIP11.21□□□□□ -0.61
CTNNA1-204ENST00000517656 RGL2O15211 777 aa11.2□□□□□ -0.62
CTNNA1-204ENST00000517656 PIP4K2AP48426 406 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-204ENST00000517656 ST5P78524 1137 aa11.2□□□□□ -0.62
CTNNA1-204ENST00000517656 FSTL1Q12841 308 aa11.2□□□□□ -0.62
CTNNA1-204ENST00000517656 TAF7Q15545 349 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-204ENST00000517656 CCDC24Q8N4L8 307 aa11.2□□□□□ -0.62
CTNNA1-204ENST00000517656 RRAGCQ9HB90 399 aa11.2□□□□□ -0.62
CTNNA1-204ENST00000517656 FOXD4L1Q9NU39 408 aa11.2□□□□□ -0.62
CTNNA1-204ENST00000517656 BCORQ6W2J9 1755 aa11.2□□□□□ -0.62
CTNNA1-204ENST00000517656 ANKRD31Q8N7Z5 1873 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms