RNA–Protein interactions for RNA: ENST00000517624.1

VIRMA-203, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 497 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-203ENST00000517624 TNS2Q63HR2 1409 aa11.96□□□□□ -0.49
VIRMA-203ENST00000517624 DLG5Q8TDM6 1919 aa11.96□□□□□ -0.49
VIRMA-203ENST00000517624 KIF16BQ96L93 1317 aa11.96□□□□□ -0.49
VIRMA-203ENST00000517624 PCDH11XQ9BZA7 1347 aa11.96□□□□□ -0.49
VIRMA-203ENST00000517624 PCDH11YQ9BZA8 1340 aa11.96□□□□□ -0.49
VIRMA-203ENST00000517624 GNAT3A8MTJ3 354 aa11.96□□□□□ -0.49
VIRMA-203ENST00000517624 PHKG2P15735 406 aa11.96□□□□□ -0.49
VIRMA-203ENST00000517624 MMRN1Q13201 1228 aa11.96□□□□□ -0.49
VIRMA-203ENST00000517624 MVPQ14764 893 aaKnown RBP11.96□□□□□ -0.49
VIRMA-203ENST00000517624 DDB1Q16531 1140 aa11.96□□□□□ -0.49
VIRMA-203ENST00000517624 IER5LQ5T953 404 aa11.96□□□□□ -0.49
VIRMA-203ENST00000517624 SHANK3Q9BYB0 1731 aa11.96□□□□□ -0.49
VIRMA-203ENST00000517624 MAP3K5Q99683 1374 aa11.95□□□□□ -0.5
VIRMA-203ENST00000517624 LMOD3Q0VAK6 560 aa11.95□□□□□ -0.5
VIRMA-203ENST00000517624 NKX1-1Q15270 411 aaPredicted RBP11.95□□□□□ -0.5
VIRMA-203ENST00000517624 ALDH1L2Q3SY69 923 aa11.95□□□□□ -0.5
VIRMA-203ENST00000517624 C8orf34Q49A92 452 aa11.95□□□□□ -0.5
VIRMA-203ENST00000517624 C1orf141Q5JVX7 400 aa11.95□□□□□ -0.5
VIRMA-203ENST00000517624 LRRC37A3O60309 1634 aa11.94□□□□□ -0.5
VIRMA-203ENST00000517624 RXRBP28702 533 aa11.94□□□□□ -0.5
VIRMA-203ENST00000517624 BRPF1P55201 1214 aaPredicted RBP11.94□□□□□ -0.5
VIRMA-203ENST00000517624 EXOSC9Q06265 439 aaKnown RBP11.94□□□□□ -0.5
VIRMA-203ENST00000517624 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
VIRMA-203ENST00000517624 SPNS2Q8IVW8 549 aa11.94□□□□□ -0.5
VIRMA-203ENST00000517624 FTSJ3Q8IY81 847 aaKnown RBP11.94□□□□□ -0.5
VIRMA-203ENST00000517624 SEPT12Q8IYM1 358 aa11.94□□□□□ -0.5
VIRMA-203ENST00000517624 DZIP1LQ8IYY4 767 aaKnown RBP11.94□□□□□ -0.5
VIRMA-203ENST00000517624 IL17REQ8NFR9 667 aa11.94□□□□□ -0.5
VIRMA-203ENST00000517624 DDX54Q8TDD1 881 aaKnown RBP11.94□□□□□ -0.5
VIRMA-203ENST00000517624 SMC4Q9NTJ3 1288 aa11.94□□□□□ -0.5
VIRMA-203ENST00000517624 IGHDP01880 384 aa11.93□□□□□ -0.5
VIRMA-203ENST00000517624 HSP90AB1P08238 724 aaKnown RBP11.93□□□□□ -0.5
VIRMA-203ENST00000517624 DCTN1Q14203 1278 aa11.93□□□□□ -0.5
VIRMA-203ENST00000517624 MPRIPQ6WCQ1 1025 aa11.93□□□□□ -0.5
VIRMA-203ENST00000517624 MARCH10Q8NA82 808 aaPredicted RBP11.93□□□□□ -0.5
VIRMA-203ENST00000517624 RTF1Q92541 710 aaKnown RBP11.93□□□□□ -0.5
VIRMA-203ENST00000517624 DCAF5Q96JK2 942 aa11.93□□□□□ -0.5
VIRMA-203ENST00000517624 RWDD1Q9H446 243 aaPredicted RBP11.93□□□□□ -0.5
VIRMA-203ENST00000517624 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
VIRMA-203ENST00000517624 DDX19BQ9UMR2 479 aa11.93□□□□□ -0.5
VIRMA-203ENST00000517624 PCDHB13Q9Y5F0 798 aa11.93□□□□□ -0.5
VIRMA-203ENST00000517624 ADAMTS7Q9UKP4 1686 aa11.93□□□□□ -0.5
VIRMA-203ENST00000517624 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
VIRMA-203ENST00000517624 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
VIRMA-203ENST00000517624 RNMTO43148 476 aaKnown RBP11.92□□□□□ -0.5
VIRMA-203ENST00000517624 RLBP1P12271 317 aa11.92□□□□□ -0.5
VIRMA-203ENST00000517624 MCM10Q7L590 875 aa11.92□□□□□ -0.5
VIRMA-203ENST00000517624 TSR2Q969E8 191 aaKnown RBP11.92□□□□□ -0.5
VIRMA-203ENST00000517624 KDM6AO15550 1401 aaPredicted RBP11.92□□□□□ -0.5
VIRMA-203ENST00000517624 A0A0G2JS52 829 aa11.91□□□□□ -0.5
VIRMA-203ENST00000517624 RGS3P49796 1198 aa11.91□□□□□ -0.5
VIRMA-203ENST00000517624 ATF7IPQ6VMQ6 1270 aa11.91□□□□□ -0.5
VIRMA-203ENST00000517624 THUMPD2Q9BTF0 503 aaKnown RBP11.91□□□□□ -0.5
VIRMA-203ENST00000517624 BCL2L13Q9BXK5 485 aa11.91□□□□□ -0.5
VIRMA-203ENST00000517624 IFT57Q9NWB7 429 aa11.91□□□□□ -0.5
VIRMA-203ENST00000517624 ERVV-2B6SEH9 535 aa11.9□□□□□ -0.5
VIRMA-203ENST00000517624 GNAI1P63096 354 aa11.9□□□□□ -0.5
VIRMA-203ENST00000517624 SKAP1Q86WV1 359 aa11.9□□□□□ -0.5
VIRMA-203ENST00000517624 SSH1Q8WYL5 1049 aa11.9□□□□□ -0.5
VIRMA-203ENST00000517624 CHMP4BQ9H444 224 aaKnown RBP11.9□□□□□ -0.5
VIRMA-203ENST00000517624 SCN11AQ9UI33 1791 aa11.9□□□□□ -0.51
VIRMA-203ENST00000517624 BCL9O00512 1426 aa11.89□□□□□ -0.51
VIRMA-203ENST00000517624 ZNF853P0CG23 659 aa11.89□□□□□ -0.51
VIRMA-203ENST00000517624 TRIM27P14373 513 aa11.89□□□□□ -0.51
VIRMA-203ENST00000517624 HDAC1Q13547 482 aaPredicted RBP11.89□□□□□ -0.51
VIRMA-203ENST00000517624 EP400Q96L91 3159 aa11.88□□□□□ -0.51
VIRMA-203ENST00000517624 RGS12O14924 1447 aa11.88□□□□□ -0.51
VIRMA-203ENST00000517624 TAF7Q15545 349 aaPredicted RBP11.88□□□□□ -0.51
VIRMA-203ENST00000517624 KRT27Q7Z3Y8 459 aa11.88□□□□□ -0.51
VIRMA-203ENST00000517624 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
VIRMA-203ENST00000517624 SLC52A2Q9HAB3 445 aa11.88□□□□□ -0.51
VIRMA-203ENST00000517624 PCDHB15Q9Y5E8 787 aa11.88□□□□□ -0.51
VIRMA-203ENST00000517624 MRC1P22897 1456 aa11.88□□□□□ -0.51
VIRMA-203ENST00000517624 BRWD3Q6RI45 1802 aa11.88□□□□□ -0.51
VIRMA-203ENST00000517624 CHL1O00533 1208 aa11.87□□□□□ -0.51
VIRMA-203ENST00000517624 TEFQ10587 303 aa11.87□□□□□ -0.51
VIRMA-203ENST00000517624 RTL5Q5HYW3 569 aaPredicted RBP11.87□□□□□ -0.51
VIRMA-203ENST00000517624 NFATC2IPQ8NCF5 419 aa11.87□□□□□ -0.51
VIRMA-203ENST00000517624 ARHGAP45Q92619 1136 aa11.87□□□□□ -0.51
VIRMA-203ENST00000517624 CFAP44Q96MT7 982 aa11.87□□□□□ -0.51
VIRMA-203ENST00000517624 SGIP1Q9BQI5 828 aa11.87□□□□□ -0.51
VIRMA-203ENST00000517624 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
VIRMA-203ENST00000517624 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
VIRMA-203ENST00000517624 TOGARAM1Q9Y4F4 1720 aa11.86□□□□□ -0.51
VIRMA-203ENST00000517624 CABP4P57796 275 aa11.86□□□□□ -0.51
VIRMA-203ENST00000517624 PDZRN3Q9UPQ7 1066 aa11.86□□□□□ -0.51
VIRMA-203ENST00000517624 SIPA1L3O60292 1781 aaPredicted RBP11.86□□□□□ -0.51
VIRMA-203ENST00000517624 FAM182BQ5T319 152 aa11.85□□□□□ -0.51
VIRMA-203ENST00000517624 ITPRIPQ8IWB1 547 aa11.85□□□□□ -0.51
VIRMA-203ENST00000517624 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
VIRMA-203ENST00000517624 NOB1Q9ULX3 412 aaKnown RBP11.85□□□□□ -0.51
VIRMA-203ENST00000517624 KAT6BQ8WYB5 2073 aa11.84□□□□□ -0.51
VIRMA-203ENST00000517624 PLCG2P16885 1265 aa11.84□□□□□ -0.51
VIRMA-203ENST00000517624 PRIM1P49642 420 aaKnown RBP11.84□□□□□ -0.51
VIRMA-203ENST00000517624 FAM196AQ6ZSG2 479 aa11.84□□□□□ -0.51
VIRMA-203ENST00000517624 MBIPQ9NS73 344 aa11.84□□□□□ -0.51
VIRMA-203ENST00000517624 MIS18AQ9NYP9 233 aa11.84□□□□□ -0.51
VIRMA-203ENST00000517624 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
VIRMA-203ENST00000517624 ITGB4P16144 1822 aa11.83□□□□□ -0.51
VIRMA-203ENST00000517624 BTBD11A6QL63 1104 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms