RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SMC2O95347 1197 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 ATP7AQ04656 1500 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 FLIIQ13045 1269 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 FERMT3Q86UX7 667 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 BCL11BQ9C0K0 894 aaPredicted RBP7.87□□□□□ -1.15
CPNE3-203ENST00000517490 NLRP1Q9C000 1473 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 CCDC171Q6TFL3 1326 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 DDIT3P35638 169 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 ATP8B2P98198 1209 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 OGFRQ9NZT2 677 aa7.87□□□□□ -1.15
CPNE3-203ENST00000517490 LRRFIP1Q32MZ4 808 aaKnown RBP7.86□□□□□ -1.15
CPNE3-203ENST00000517490 MIS18AQ9NYP9 233 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-203ENST00000517490 SMTNL1A8MU46 457 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 C1orf141Q5JVX7 400 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 FILIP1Q7Z7B0 1213 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 TXNDC2Q86VQ3 553 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 CCAR2Q8N163 923 aaKnown RBP7.86□□□□□ -1.15
CPNE3-203ENST00000517490 FBXW7Q969H0 707 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 CALCOCO1Q9P1Z2 691 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 MSH6P52701 1360 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 WASLO00401 505 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-203ENST00000517490 ZNF165P49910 485 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 SYNE3Q6ZMZ3 975 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 CCDC186Q7Z3E2 898 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 CKAP2LQ8IYA6 745 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 EID1Q9Y6B2 187 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 UTP14CQ5TAP6 766 aaKnown RBP7.86□□□□□ -1.15
CPNE3-203ENST00000517490 CEP135Q66GS9 1140 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 WAPLQ7Z5K2 1190 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 ANO10Q9NW15 660 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 HOOK1Q9UJC3 728 aaKnown RBP7.86□□□□□ -1.15
CPNE3-203ENST00000517490 RIMS2Q9UQ26 1411 aa7.86□□□□□ -1.15
CPNE3-203ENST00000517490 STK3Q13188 491 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 GORABQ5T7V8 394 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 KRT222Q8N1A0 295 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 TTC21BQ7Z4L5 1316 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 CPLX1O14810 134 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 NPHP1O15259 732 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 GSDMDP57764 484 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 LMOD2Q6P5Q4 547 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 CPLX2Q6PUV4 134 aaKnown RBP7.85□□□□□ -1.15
CPNE3-203ENST00000517490 KIF2CQ99661 725 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 AOX1Q06278 1338 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 FBLN1P23142 703 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 DNM1Q05193 864 aaKnown RBP7.85□□□□□ -1.15
CPNE3-203ENST00000517490 NOM1Q5C9Z4 860 aaKnown RBP7.85□□□□□ -1.15
CPNE3-203ENST00000517490 TSPYL1Q9H0U9 437 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 SSH2Q76I76 1423 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 GNAT3A8MTJ3 354 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 GADD45BO75293 160 aaPredicted RBP7.85□□□□□ -1.15
CPNE3-203ENST00000517490 TPM1P09493 284 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 SYT1P21579 422 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 FOSBP53539 338 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 CEBPZQ03701 1054 aaKnown RBP7.85□□□□□ -1.15
CPNE3-203ENST00000517490 AACSQ86V21 672 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 SPG7Q9UQ90 795 aa7.85□□□□□ -1.15
CPNE3-203ENST00000517490 PTCH1Q13635 1447 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 ME1P48163 572 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 TYRO3Q06418 890 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 OLFM4Q6UX06 510 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 ABCC1P33527 1531 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 RIOK3O14730 519 aaKnown RBP7.84□□□□□ -1.15
CPNE3-203ENST00000517490 IL13P35225 146 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 AK2P54819 239 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 LARP6Q9BRS8 491 aaKnown RBP7.84□□□□□ -1.15
CPNE3-203ENST00000517490 DMTNQ08495 405 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 STK38Q15208 465 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 STX1AQ16623 288 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 ANO6Q4KMQ2 910 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 RHPN1Q8TCX5 695 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 BBXQ8WY36 941 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-203ENST00000517490 AK7Q96M32 723 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 MAP3K4Q9Y6R4 1608 aa7.84□□□□□ -1.15
CPNE3-203ENST00000517490 IQSEC2Q5JU85 1478 aa7.84□□□□□ -1.16
CPNE3-203ENST00000517490 PTGS1P23219 599 aa7.84□□□□□ -1.16
CPNE3-203ENST00000517490 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.84□□□□□ -1.16
CPNE3-203ENST00000517490 SIRT2Q8IXJ6 389 aa7.84□□□□□ -1.16
CPNE3-203ENST00000517490 UBXN4Q92575 508 aa7.84□□□□□ -1.16
CPNE3-203ENST00000517490 EVI5LQ96CN4 794 aa7.84□□□□□ -1.16
CPNE3-203ENST00000517490 ACBD3Q9H3P7 528 aa7.84□□□□□ -1.16
CPNE3-203ENST00000517490 CBFA2T2O43439 604 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 CUL4AQ13619 759 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 BMS1Q14692 1282 aaKnown RBP7.83□□□□□ -1.16
CPNE3-203ENST00000517490 TMCO3Q6UWJ1 677 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 BCL2L12Q9HB09 334 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 ECHDC1Q9NTX5 307 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 PIK3R4Q99570 1358 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 CLTCL1P53675 1640 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 RNF17Q9BXT8 1623 aaKnown RBP7.83□□□□□ -1.16
CPNE3-203ENST00000517490 SFPQP23246 707 aaKnown RBP eCLIP7.83□□□□□ -1.16
CPNE3-203ENST00000517490 GABPB1Q06547 395 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-203ENST00000517490 VPS53Q5VIR6 699 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 PPP1R42Q7Z4L9 355 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 ZNF397Q8NF99 534 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-203ENST00000517490 TET3O43151 1660 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 ERICH4A6NGS2 130 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 TAF7Q15545 349 aaPredicted RBP7.83□□□□□ -1.16
CPNE3-203ENST00000517490 OSBPL3Q9H4L5 887 aa7.83□□□□□ -1.16
CPNE3-203ENST00000517490 RIMBP3CA6NJZ7 1639 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms