RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ERBB4Q15303 1308 aa12.86□□□□□ -0.35
PCDHGA1-202ENST00000517417 FKBP4Q02790 459 aaKnown RBP eCLIP12.86□□□□□ -0.35
PCDHGA1-202ENST00000517417 CYP46A1Q9Y6A2 500 aa12.86□□□□□ -0.35
PCDHGA1-202ENST00000517417 PPP1R9BQ96SB3 815 aa12.86□□□□□ -0.35
PCDHGA1-202ENST00000517417 LMBRD1Q9NUN5 540 aa12.86□□□□□ -0.35
PCDHGA1-202ENST00000517417 CEP152O94986 1710 aa12.86□□□□□ -0.35
PCDHGA1-202ENST00000517417 GSPT1P15170 499 aaKnown RBP12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 CCDC158Q5M9N0 1113 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 PRDM10Q9NQV6 1147 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 VWDEQ8N2E2 1590 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 PPRC1Q5VV67 1664 aaKnown RBP12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 CEP85Q6P2H3 762 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 NOL7Q9UMY1 257 aaKnown RBP12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 EFCAB6Q5THR3 1501 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 PPIP5K1Q6PFW1 1433 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 PTPRCP08575 1304 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 DYNC1I1O14576 645 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 PDCP20941 246 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 HECW2Q9P2P5 1572 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 HIP1O00291 1037 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 FRMPD1Q5SYB0 1578 aa12.85□□□□□ -0.35
PCDHGA1-202ENST00000517417 KRT24Q2M2I5 525 aa12.84□□□□□ -0.35
PCDHGA1-202ENST00000517417 CCDC183Q5T5S1 534 aa12.84□□□□□ -0.35
PCDHGA1-202ENST00000517417 PDE1AP54750 535 aa12.84□□□□□ -0.35
PCDHGA1-202ENST00000517417 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
PCDHGA1-202ENST00000517417 MPRIPQ6WCQ1 1025 aa12.84□□□□□ -0.35
PCDHGA1-202ENST00000517417 HOOK1Q9UJC3 728 aaKnown RBP12.84□□□□□ -0.35
PCDHGA1-202ENST00000517417 TTC39AQ5SRH9 613 aa12.84□□□□□ -0.35
PCDHGA1-202ENST00000517417 ZFYVE9O95405 1425 aa12.84□□□□□ -0.35
PCDHGA1-202ENST00000517417 PKP1Q13835 747 aa12.84□□□□□ -0.35
PCDHGA1-202ENST00000517417 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
PCDHGA1-202ENST00000517417 CEP89Q96ST8 783 aa12.84□□□□□ -0.35
PCDHGA1-202ENST00000517417 TAF7Q15545 349 aaPredicted RBP12.83□□□□□ -0.36
PCDHGA1-202ENST00000517417 ZRANB1Q9UGI0 708 aa12.83□□□□□ -0.36
PCDHGA1-202ENST00000517417 ABCA6Q8N139 1617 aa12.83□□□□□ -0.36
PCDHGA1-202ENST00000517417 IPO7O95373 1038 aaKnown RBP12.83□□□□□ -0.36
PCDHGA1-202ENST00000517417 CEP126Q9P2H0 1117 aa12.83□□□□□ -0.36
PCDHGA1-202ENST00000517417 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 GOLGA6L1Q8N7Z2 621 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 ANKRD20A12PQ8NF67 263 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 ZNF830Q96NB3 372 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 TRIM5Q9C035 493 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 CCDC192P0DO97 292 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 ZNF771Q7L3S4 317 aaPredicted RBP12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 JAKMIP1Q96N16 626 aaKnown RBP12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 LARP6Q9BRS8 491 aaKnown RBP12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 RNF17Q9BXT8 1623 aaKnown RBP12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 KINO60870 393 aaKnown RBP12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 ADCY5O95622 1261 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 LARP1BQ659C4 914 aaKnown RBP12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 KCNH5Q8NCM2 988 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 MPHOSPH8Q99549 860 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 PHF8Q9UPP1 1060 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 RIMBP3CA6NJZ7 1639 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 RIMBP3BA6NNM3 1639 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 RIMBP3Q9UFD9 1639 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 MAP3K4Q9Y6R4 1608 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 ABCC4O15439 1325 aa12.82□□□□□ -0.36
PCDHGA1-202ENST00000517417 TSPOAP1O95153 1857 aa12.81□□□□□ -0.36
PCDHGA1-202ENST00000517417 BLOC1S2Q6QNY1 142 aa12.81□□□□□ -0.36
PCDHGA1-202ENST00000517417 CCDC47Q96A33 483 aaKnown RBP12.81□□□□□ -0.36
PCDHGA1-202ENST00000517417 IQGAP1P46940 1657 aa12.81□□□□□ -0.36
PCDHGA1-202ENST00000517417 HCLS1P14317 486 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA1-202ENST00000517417 USP48Q86UV5 1035 aa12.81□□□□□ -0.36
PCDHGA1-202ENST00000517417 AEBP1Q8IUX7 1158 aa12.81□□□□□ -0.36
PCDHGA1-202ENST00000517417 TCEAL9Q9UHQ7 104 aa12.81□□□□□ -0.36
PCDHGA1-202ENST00000517417 CTDP1Q9Y5B0 961 aaPredicted RBP12.81□□□□□ -0.36
PCDHGA1-202ENST00000517417 NLRP1Q9C000 1473 aa12.8□□□□□ -0.36
PCDHGA1-202ENST00000517417 MSH6P52701 1360 aa12.8□□□□□ -0.36
PCDHGA1-202ENST00000517417 CASTP20810 708 aaKnown RBP12.8□□□□□ -0.36
PCDHGA1-202ENST00000517417 TMEM63CQ9P1W3 806 aa12.8□□□□□ -0.36
PCDHGA1-202ENST00000517417 LRRFIP2Q9Y608 721 aaKnown RBP12.8□□□□□ -0.36
PCDHGA1-202ENST00000517417 STK38Q15208 465 aa12.8□□□□□ -0.36
PCDHGA1-202ENST00000517417 CCDC83Q8IWF9 413 aa12.8□□□□□ -0.36
PCDHGA1-202ENST00000517417 CHAMP1Q96JM3 812 aa12.8□□□□□ -0.36
PCDHGA1-202ENST00000517417 XBP1P17861 261 aa12.79□□□□□ -0.36
PCDHGA1-202ENST00000517417 ABCC3O15438 1527 aa12.79□□□□□ -0.36
PCDHGA1-202ENST00000517417 PDRG1Q9NUG6 133 aa12.79□□□□□ -0.36
PCDHGA1-202ENST00000517417 CBX1P83916 185 aa12.79□□□□□ -0.36
PCDHGA1-202ENST00000517417 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
PCDHGA1-202ENST00000517417 PDILTQ8N807 584 aa12.79□□□□□ -0.36
PCDHGA1-202ENST00000517417 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.79□□□□□ -0.36
PCDHGA1-202ENST00000517417 KIF1BO60333 1816 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 UVSSAQ2YD98 709 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 FERMT3Q86UX7 667 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 SIRT2Q8IXJ6 389 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 GPT2Q8TD30 523 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 KIF1BPQ96EK5 621 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 KRT85P78386 507 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 IKQ13123 557 aaPredicted RBP12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 HSP90AB2PQ58FF8 381 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 BICDL1Q6ZP65 573 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 CNPY2Q9Y2B0 182 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 ANXA1P04083 346 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 IL13P35225 146 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 ME1P48163 572 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 PIP4K2BP78356 416 aa12.78□□□□□ -0.36
PCDHGA1-202ENST00000517417 TTC12Q9H892 705 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms