RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 MRC1P22897 1456 aa24.37■■□□□ 1.49
HOXA11-202ENST00000517402 IBTKQ9P2D0 1353 aaPredicted RBP24.37■■□□□ 1.49
HOXA11-202ENST00000517402 COL5A2P05997 1499 aaPredicted RBP24.37■■□□□ 1.49
HOXA11-202ENST00000517402 WDR17Q8IZU2 1322 aa24.36■■□□□ 1.49
HOXA11-202ENST00000517402 SDSP20132 328 aa24.36■■□□□ 1.49
HOXA11-202ENST00000517402 LRRCC1Q9C099 1032 aa24.36■■□□□ 1.49
HOXA11-202ENST00000517402 TOM1L2Q6ZVM7 507 aa24.35■■□□□ 1.49
HOXA11-202ENST00000517402 ZNF496Q96IT1 587 aaPredicted RBP24.35■■□□□ 1.49
HOXA11-202ENST00000517402 DCAF5Q96JK2 942 aa24.35■■□□□ 1.49
HOXA11-202ENST00000517402 AIMP1Q12904 312 aaKnown RBP24.35■■□□□ 1.49
HOXA11-202ENST00000517402 PDIA6Q15084 440 aa24.35■■□□□ 1.49
HOXA11-202ENST00000517402 PPP1R42Q7Z4L9 355 aa24.35■■□□□ 1.49
HOXA11-202ENST00000517402 PARP4Q9UKK3 1724 aaKnown RBP24.35■■□□□ 1.49
HOXA11-202ENST00000517402 NFKBIBQ15653 356 aa24.34■■□□□ 1.49
HOXA11-202ENST00000517402 NHSL1Q5SYE7 1610 aa24.34■■□□□ 1.49
HOXA11-202ENST00000517402 PDE1AP54750 535 aa24.34■■□□□ 1.49
HOXA11-202ENST00000517402 CWF19L2Q2TBE0 894 aaKnown RBP24.34■■□□□ 1.49
HOXA11-202ENST00000517402 SPRYD3Q8NCJ5 442 aa24.34■■□□□ 1.49
HOXA11-202ENST00000517402 KSR2Q6VAB6 950 aa24.33■■□□□ 1.49
HOXA11-202ENST00000517402 SSH3Q8TE77 659 aa24.33■■□□□ 1.49
HOXA11-202ENST00000517402 SALL3Q9BXA9 1300 aa24.32■■□□□ 1.48
HOXA11-202ENST00000517402 DDX21Q9NR30 783 aaKnown RBP eCLIP24.32■■□□□ 1.48
HOXA11-202ENST00000517402 HYPKQ9NX55 129 aa24.32■■□□□ 1.48
HOXA11-202ENST00000517402 MYL6BP14649 208 aa24.32■■□□□ 1.48
HOXA11-202ENST00000517402 PLEKHG2Q9H7P9 1386 aa24.31■■□□□ 1.48
HOXA11-202ENST00000517402 TUBGCP6Q96RT7 1819 aa24.31■■□□□ 1.48
HOXA11-202ENST00000517402 SRGAP3O43295 1099 aa24.31■■□□□ 1.48
HOXA11-202ENST00000517402 PIP4K2AP48426 406 aaPredicted RBP24.31■■□□□ 1.48
HOXA11-202ENST00000517402 KIF2CQ99661 725 aa24.31■■□□□ 1.48
HOXA11-202ENST00000517402 STRN4Q9NRL3 753 aa24.31■■□□□ 1.48
HOXA11-202ENST00000517402 POLA2Q14181 598 aa24.3■■□□□ 1.48
HOXA11-202ENST00000517402 TTC5Q8N0Z6 440 aa24.3■■□□□ 1.48
HOXA11-202ENST00000517402 OSBPL3Q9H4L5 887 aa24.3■■□□□ 1.48
HOXA11-202ENST00000517402 IL1RAPL2Q9NP60 686 aa24.3■■□□□ 1.48
HOXA11-202ENST00000517402 GLI3P10071 1580 aa24.29■■□□□ 1.48
HOXA11-202ENST00000517402 MX1P20591 662 aa24.29■■□□□ 1.48
HOXA11-202ENST00000517402 USP16Q9Y5T5 823 aa24.29■■□□□ 1.48
HOXA11-202ENST00000517402 SURF6O75683 361 aaKnown RBP24.28■■□□□ 1.48
HOXA11-202ENST00000517402 CABP4P57796 275 aa24.28■■□□□ 1.48
HOXA11-202ENST00000517402 ANTXR1Q9H6X2 564 aa24.28■■□□□ 1.48
HOXA11-202ENST00000517402 HSP90AB1P08238 724 aaKnown RBP24.27■■□□□ 1.48
HOXA11-202ENST00000517402 LARP1Q6PKG0 1096 aaKnown RBP24.27■■□□□ 1.48
HOXA11-202ENST00000517402 C9orf78Q9NZ63 289 aaPredicted RBP24.27■■□□□ 1.48
HOXA11-202ENST00000517402 USP35Q9P2H5 1018 aa24.27■■□□□ 1.48
HOXA11-202ENST00000517402 SHANK3Q9BYB0 1731 aa24.27■■□□□ 1.48
HOXA11-202ENST00000517402 PCDH11XQ9BZA7 1347 aa24.27■■□□□ 1.48
HOXA11-202ENST00000517402 PCDH11YQ9BZA8 1340 aa24.27■■□□□ 1.48
HOXA11-202ENST00000517402 FRAT2O75474 233 aaPredicted RBP24.26■■□□□ 1.47
HOXA11-202ENST00000517402 ZCRB1Q8TBF4 217 aaKnown RBP24.26■■□□□ 1.47
HOXA11-202ENST00000517402 ALDH1L1O75891 902 aa24.25■■□□□ 1.47
HOXA11-202ENST00000517402 HSCBQ8IWL3 235 aa24.25■■□□□ 1.47
HOXA11-202ENST00000517402 XAGE3Q8WTP9 111 aa24.25■■□□□ 1.47
HOXA11-202ENST00000517402 RBM42Q9BTD8 480 aaKnown RBP24.25■■□□□ 1.47
HOXA11-202ENST00000517402 DDX58O95786 925 aaKnown RBP24.25■■□□□ 1.47
HOXA11-202ENST00000517402 SNRPA1P09661 255 aaKnown RBP24.24■■□□□ 1.47
HOXA11-202ENST00000517402 LINS1Q8NG48 757 aa24.24■■□□□ 1.47
HOXA11-202ENST00000517402 FMNL2Q96PY5 1086 aa24.24■■□□□ 1.47
HOXA11-202ENST00000517402 CD2BP2O95400 341 aaKnown RBP24.23■■□□□ 1.47
HOXA11-202ENST00000517402 COPS6Q7L5N1 327 aa24.23■■□□□ 1.47
HOXA11-202ENST00000517402 RIC3Q7Z5B4 369 aa24.23■■□□□ 1.47
HOXA11-202ENST00000517402 NUTM1Q86Y26 1132 aa24.23■■□□□ 1.47
HOXA11-202ENST00000517402 IGKV5-2P06315 115 aa24.23■■□□□ 1.47
HOXA11-202ENST00000517402 RHPN1Q8TCX5 695 aa24.23■■□□□ 1.47
HOXA11-202ENST00000517402 IL2RBP14784 551 aa24.22■■□□□ 1.47
HOXA11-202ENST00000517402 LRP10Q7Z4F1 713 aa24.22■■□□□ 1.47
HOXA11-202ENST00000517402 CARD10Q9BWT7 1032 aa24.22■■□□□ 1.47
HOXA11-202ENST00000517402 LAMB4A4D0S4 1761 aa24.22■■□□□ 1.47
HOXA11-202ENST00000517402 DEKP35659 375 aaKnown RBP24.22■■□□□ 1.47
HOXA11-202ENST00000517402 CASC1Q6TDU7 716 aa24.22■■□□□ 1.47
HOXA11-202ENST00000517402 DDX54Q8TDD1 881 aaKnown RBP24.22■■□□□ 1.47
HOXA11-202ENST00000517402 GRM8O00222 908 aa24.21■■□□□ 1.47
HOXA11-202ENST00000517402 EVA1CP58658 441 aa24.2■■□□□ 1.47
HOXA11-202ENST00000517402 SUCLG2Q96I99 432 aa24.2■■□□□ 1.47
HOXA11-202ENST00000517402 USP26Q9BXU7 913 aa24.2■■□□□ 1.47
HOXA11-202ENST00000517402 MTX1Q13505 466 aa24.2■■□□□ 1.46
HOXA11-202ENST00000517402 KAZALD1Q96I82 304 aa24.2■■□□□ 1.46
HOXA11-202ENST00000517402 RAB11FIP3O75154 756 aa24.19■■□□□ 1.46
HOXA11-202ENST00000517402 UNC5CLQ8IV45 518 aa24.19■■□□□ 1.46
HOXA11-202ENST00000517402 STAP2Q9UGK3 403 aa24.19■■□□□ 1.46
HOXA11-202ENST00000517402 PA2G4Q9UQ80 394 aaKnown RBP24.19■■□□□ 1.46
HOXA11-202ENST00000517402 SNX21Q969T3 373 aa24.19■■□□□ 1.46
HOXA11-202ENST00000517402 MYD88Q99836 296 aa24.19■■□□□ 1.46
HOXA11-202ENST00000517402 UBR2Q8IWV8 1755 aa24.18■■□□□ 1.46
HOXA11-202ENST00000517402 TRIM6-TRIM34B2RNG4 842 aa24.18■■□□□ 1.46
HOXA11-202ENST00000517402 RILPL2Q969X0 211 aa24.18■■□□□ 1.46
HOXA11-202ENST00000517402 KIF1BPQ96EK5 621 aa24.18■■□□□ 1.46
HOXA11-202ENST00000517402 BICC1Q9H694 974 aaKnown RBP24.17■■□□□ 1.46
HOXA11-202ENST00000517402 ARFGEF2Q9Y6D5 1785 aa24.17■■□□□ 1.46
HOXA11-202ENST00000517402 TOGARAM1Q9Y4F4 1720 aa24.17■■□□□ 1.46
HOXA11-202ENST00000517402 ROBO1Q9Y6N7 1651 aa24.17■■□□□ 1.46
HOXA11-202ENST00000517402 UTYO14607 1347 aa24.16■■□□□ 1.46
HOXA11-202ENST00000517402 NEURL1BA8MQ27 555 aa24.16■■□□□ 1.46
HOXA11-202ENST00000517402 OS9Q13438 667 aaPredicted RBP24.16■■□□□ 1.46
HOXA11-202ENST00000517402 AFDNP55196 1824 aaKnown RBP24.16■■□□□ 1.46
HOXA11-202ENST00000517402 ANKRD13DQ6ZTN6 518 aa24.16■■□□□ 1.46
HOXA11-202ENST00000517402 BTG4Q9NY30 223 aa24.16■■□□□ 1.46
HOXA11-202ENST00000517402 PAPPAQ13219 1627 aa24.16■■□□□ 1.46
HOXA11-202ENST00000517402 NEXNQ0ZGT2 675 aa24.15■■□□□ 1.46
HOXA11-202ENST00000517402 METTL22Q9BUU2 404 aaPredicted RBP24.15■■□□□ 1.46
HOXA11-202ENST00000517402 KCPQ6ZWJ8 1503 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms