RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 LINC01559Q495D7 138 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 RNF20Q5VTR2 975 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 CC2D2BQ6DHV5 1058 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 POTEHQ6S545 545 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 SH3RF1Q7Z6J0 888 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 CCDC24Q8N4L8 307 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 CRELD1Q96HD1 420 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 MRFAP1L1Q96HT8 127 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 KCNH8Q96L42 1107 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 NEUROD4Q9HD90 331 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 PCDH12Q9NPG4 1184 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 IFT57Q9NWB7 429 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 STIM2Q9P246 746 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 GGT7Q9UJ14 662 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 LRFN2Q9ULH4 789 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 G3BP2Q9UN86 482 aaKnown RBP3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 AXIN2Q9Y2T1 843 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 SALL2Q9Y467 1007 aaPredicted RBP3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 AK5Q9Y6K8 562 aa3.77□□□□□ -1.81
SCARNA11.3-201ENST00000517276 PLEKHD1A6NEE1 506 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 OPLAHO14841 1288 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 PPP1R12BO60237 982 aaPredicted RBP3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 PEX14O75381 377 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 ATF4P18848 351 aaPredicted RBP3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 HSD3B2P26439 372 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 SCNN1DP51172 638 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 APLP1P51693 650 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 DNM1Q05193 864 aaKnown RBP3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 AGERQ15109 404 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 PLEKHG6Q3KR16 790 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 RNF187Q5TA31 235 aaPredicted RBP3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 SOGA3Q5TF21 947 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 MEI1Q5TIA1 1274 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 ALG1LQ6GMV1 187 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 ALKBH2Q6NS38 261 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 VPS37DQ86XT2 251 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 SLC10A4Q96EP9 437 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 ZFRQ96KR1 1074 aaKnown RBP3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 QTRT2Q9H974 415 aaKnown RBP3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 COPRSQ9NQ92 184 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 CHPF2Q9P2E5 772 aa3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 V9GY48 417 aaPredicted RBP3.76□□□□□ -1.81
SCARNA11.3-201ENST00000517276 A6NHS1 94 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 XRCC5P13010 732 aaKnown RBP3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 EIF4BP23588 611 aaKnown RBP3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 ITGAEP38570 1179 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 EPHA4P54764 986 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 GDF10P55107 478 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 PTPN12Q05209 780 aaKnown RBP3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 SERINC3Q13530 473 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 MSS51Q4VC12 460 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 PI16Q6UXB8 463 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 HS2ST1Q7LGA3 356 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 EXOC8Q8IYI6 725 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 RPUSD2Q8IZ73 545 aaKnown RBP3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 GJD3Q8N144 294 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 BAP1Q92560 729 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 EDEM1Q92611 657 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 RNPC3Q96LT9 517 aaKnown RBP3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 CSRNP1Q96S65 589 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 KANSL2Q9H9L4 492 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 PRDM16Q9HAZ2 1276 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 GABBR1Q9UBS5 961 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 VPS9D1Q9Y2B5 631 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 PCDHB3Q9Y5E6 796 aa3.75□□□□□ -1.81
SCARNA11.3-201ENST00000517276 EIF1AYO14602 144 aaKnown RBP3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 NR1I2O75469 434 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 CLSTN1O94985 981 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 MYCP01106 439 aaPredicted RBP3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 PDGFAP04085 211 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 POTEJP0CG39 1038 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 GJA8P48165 433 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 MMP16P51512 607 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 CBLBQ13191 982 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 NFE2L2Q16236 605 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 SLC9A9Q8IVB4 645 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 ETFBKMTQ8IXQ9 262 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 CKAP2LQ8IYA6 745 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 ZCRB1Q8TBF4 217 aaKnown RBP3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 STAG1Q8WVM7 1258 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 GPRASP2Q96D09 838 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 LRCH3Q96II8 777 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 NGLY1Q96IV0 654 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 SRPK1Q96SB4 655 aaKnown RBP3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 BRINP2Q9C0B6 783 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 MYH16Q9H6N6 1097 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 MRVI1Q9Y6F6 885 aa3.74□□□□□ -1.81
SCARNA11.3-201ENST00000517276 FAM221BA6H8Z2 402 aa3.73□□□□□ -1.81
SCARNA11.3-201ENST00000517276 F6X3S4 739 aa3.73□□□□□ -1.81
SCARNA11.3-201ENST00000517276 ARHGAP33O14559 1287 aa3.73□□□□□ -1.81
SCARNA11.3-201ENST00000517276 ENPP3O14638 875 aa3.73□□□□□ -1.81
SCARNA11.3-201ENST00000517276 TLL1O43897 1013 aa3.73□□□□□ -1.81
SCARNA11.3-201ENST00000517276 DNAJC6O75061 913 aa3.73□□□□□ -1.81
SCARNA11.3-201ENST00000517276 HOXB1P14653 301 aaPredicted RBP3.73□□□□□ -1.81
SCARNA11.3-201ENST00000517276 IRS1P35568 1242 aa3.73□□□□□ -1.81
SCARNA11.3-201ENST00000517276 ETFBP38117 255 aa3.73□□□□□ -1.81
SCARNA11.3-201ENST00000517276 IRX6P78412 446 aaPredicted RBP3.73□□□□□ -1.81
SCARNA11.3-201ENST00000517276 AMPD3Q01432 767 aa3.73□□□□□ -1.81
SCARNA11.3-201ENST00000517276 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms