RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 TSPAN10Q9H1Z9 355 aaPredicted RBP10.8□□□□□ -0.68
SCARNA1-201ENST00000517138 RUBCNLQ9H714 662 aa10.8□□□□□ -0.68
SCARNA1-201ENST00000517138 CABP1Q9NZU7 370 aa10.8□□□□□ -0.68
SCARNA1-201ENST00000517138 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.79□□□□□ -0.68
SCARNA1-201ENST00000517138 A0A1B0GTH6 734 aa10.79□□□□□ -0.68
SCARNA1-201ENST00000517138 LARP1Q6PKG0 1096 aaKnown RBP10.79□□□□□ -0.68
SCARNA1-201ENST00000517138 ARXQ96QS3 562 aa10.79□□□□□ -0.68
SCARNA1-201ENST00000517138 ATP4AP20648 1035 aa10.78□□□□□ -0.68
SCARNA1-201ENST00000517138 SRPK2P78362 688 aaKnown RBP10.78□□□□□ -0.68
SCARNA1-201ENST00000517138 GTPBP3Q969Y2 492 aaKnown RBP10.78□□□□□ -0.68
SCARNA1-201ENST00000517138 AIDAQ96BJ3 306 aa10.78□□□□□ -0.68
SCARNA1-201ENST00000517138 CNTNAP3BQ96NU0 1288 aa10.78□□□□□ -0.68
SCARNA1-201ENST00000517138 CNTNAP3Q9BZ76 1288 aa10.78□□□□□ -0.68
SCARNA1-201ENST00000517138 FAM196BA6NMK8 535 aa10.77□□□□□ -0.69
SCARNA1-201ENST00000517138 GAS6Q14393 721 aa10.77□□□□□ -0.69
SCARNA1-201ENST00000517138 ANKMY2Q8IV38 441 aa10.77□□□□□ -0.69
SCARNA1-201ENST00000517138 KLRG1Q96E93 195 aa10.77□□□□□ -0.69
SCARNA1-201ENST00000517138 TXLNAP40222 546 aa10.76□□□□□ -0.69
SCARNA1-201ENST00000517138 SEC13P55735 322 aa10.76□□□□□ -0.69
SCARNA1-201ENST00000517138 CCDC82Q8N4S0 544 aa10.76□□□□□ -0.69
SCARNA1-201ENST00000517138 NUCKS1Q9H1E3 243 aaKnown RBP10.76□□□□□ -0.69
SCARNA1-201ENST00000517138 TIMELESSQ9UNS1 1208 aa10.76□□□□□ -0.69
SCARNA1-201ENST00000517138 C21orf2O43822 256 aa10.75□□□□□ -0.69
SCARNA1-201ENST00000517138 UBAP2LQ14157 1087 aaKnown RBP10.75□□□□□ -0.69
SCARNA1-201ENST00000517138 M0R2N6 131 aa10.74□□□□□ -0.69
SCARNA1-201ENST00000517138 L3MBTL2Q969R5 705 aa10.74□□□□□ -0.69
SCARNA1-201ENST00000517138 CCDC97Q96F63 343 aaPredicted RBP10.74□□□□□ -0.69
SCARNA1-201ENST00000517138 NOS2P35228 1153 aa10.73□□□□□ -0.69
SCARNA1-201ENST00000517138 TEAD4Q15561 434 aa10.73□□□□□ -0.69
SCARNA1-201ENST00000517138 ZMIZ1Q9ULJ6 1067 aa10.73□□□□□ -0.69
SCARNA1-201ENST00000517138 H7C1W4 665 aa10.72□□□□□ -0.69
SCARNA1-201ENST00000517138 HINFPQ9BQA5 517 aa10.72□□□□□ -0.69
SCARNA1-201ENST00000517138 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
SCARNA1-201ENST00000517138 EML1O00423 815 aa10.71□□□□□ -0.69
SCARNA1-201ENST00000517138 GMCL1Q96IK5 515 aa10.71□□□□□ -0.69
SCARNA1-201ENST00000517138 SERPINA10Q9UK55 444 aa10.71□□□□□ -0.69
SCARNA1-201ENST00000517138 NOVA2Q9UNW9 492 aaKnown RBP10.71□□□□□ -0.69
SCARNA1-201ENST00000517138 ZNF232Q9UNY5 417 aa10.71□□□□□ -0.69
SCARNA1-201ENST00000517138 ATAD2Q6PL18 1390 aa10.7□□□□□ -0.7
SCARNA1-201ENST00000517138 STK32AQ8WU08 396 aa10.7□□□□□ -0.7
SCARNA1-201ENST00000517138 SCG3Q8WXD2 468 aaKnown RBP10.7□□□□□ -0.7
SCARNA1-201ENST00000517138 CRISPLD1Q9H336 500 aa10.7□□□□□ -0.7
SCARNA1-201ENST00000517138 HCN2Q9UL51 889 aa10.7□□□□□ -0.7
SCARNA1-201ENST00000517138 SERTM1A2A2V5 107 aa10.69□□□□□ -0.7
SCARNA1-201ENST00000517138 SUPT5HO00267 1087 aaKnown RBP10.69□□□□□ -0.7
SCARNA1-201ENST00000517138 CSB-PGBD3P0DP91 1061 aa10.69□□□□□ -0.7
SCARNA1-201ENST00000517138 PGBD3Q8N328 593 aa10.69□□□□□ -0.7
SCARNA1-201ENST00000517138 C7orf43Q8WVR3 580 aa10.69□□□□□ -0.7
SCARNA1-201ENST00000517138 ZIC5Q96T25 663 aa10.69□□□□□ -0.7
SCARNA1-201ENST00000517138 HCN4Q9Y3Q4 1203 aa10.69□□□□□ -0.7
SCARNA1-201ENST00000517138 A0A1W2PNR3 127 aa10.68□□□□□ -0.7
SCARNA1-201ENST00000517138 PPP1R12BO60237 982 aaPredicted RBP10.68□□□□□ -0.7
SCARNA1-201ENST00000517138 PSMA6P60900 246 aaKnown RBP10.68□□□□□ -0.7
SCARNA1-201ENST00000517138 INSM1Q01101 510 aaPredicted RBP10.68□□□□□ -0.7
SCARNA1-201ENST00000517138 NBPF1Q3BBV0 1214 aa10.68□□□□□ -0.7
SCARNA1-201ENST00000517138 ARSJQ5FYB0 599 aaPredicted RBP10.68□□□□□ -0.7
SCARNA1-201ENST00000517138 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
SCARNA1-201ENST00000517138 ZDHHC3Q9NYG2 299 aa10.68□□□□□ -0.7
SCARNA1-201ENST00000517138 POTEAQ6S8J7 498 aa10.67□□□□□ -0.7
SCARNA1-201ENST00000517138 ZSCAN1Q8NBB4 408 aa10.67□□□□□ -0.7
SCARNA1-201ENST00000517138 FAM200AQ8TCP9 573 aa10.67□□□□□ -0.7
SCARNA1-201ENST00000517138 WHAMMQ8TF30 809 aa10.67□□□□□ -0.7
SCARNA1-201ENST00000517138 BNIP3LO60238 219 aa10.66□□□□□ -0.7
SCARNA1-201ENST00000517138 EFHC2Q5JST6 749 aa10.66□□□□□ -0.7
SCARNA1-201ENST00000517138 C1orf216Q8TAB5 229 aa10.66□□□□□ -0.7
SCARNA1-201ENST00000517138 ABHD17AQ96GS6 310 aa10.66□□□□□ -0.7
SCARNA1-201ENST00000517138 ZCCHC2Q9C0B9 1178 aaKnown RBP10.66□□□□□ -0.7
SCARNA1-201ENST00000517138 TATP17735 454 aaPredicted RBP10.65□□□□□ -0.7
SCARNA1-201ENST00000517138 FAM69CQ0P6D2 419 aa10.65□□□□□ -0.7
SCARNA1-201ENST00000517138 PBXIP1Q96AQ6 731 aa10.65□□□□□ -0.7
SCARNA1-201ENST00000517138 C2orf49Q9BVC5 232 aaPredicted RBP10.65□□□□□ -0.7
SCARNA1-201ENST00000517138 NDFIP2Q9NV92 336 aa10.65□□□□□ -0.7
SCARNA1-201ENST00000517138 ATG7O95352 703 aa10.64□□□□□ -0.71
SCARNA1-201ENST00000517138 ADAMTS2O95450 1211 aa10.64□□□□□ -0.71
SCARNA1-201ENST00000517138 FOXR1Q6PIV2 292 aa10.64□□□□□ -0.71
SCARNA1-201ENST00000517138 BICDL1Q6ZP65 573 aa10.64□□□□□ -0.71
SCARNA1-201ENST00000517138 TRERF1Q96PN7 1200 aa10.64□□□□□ -0.71
SCARNA1-201ENST00000517138 PHACTR1Q9C0D0 580 aa10.64□□□□□ -0.71
SCARNA1-201ENST00000517138 LBRQ14739 615 aaKnown RBP10.63□□□□□ -0.71
SCARNA1-201ENST00000517138 TMEM164Q5U3C3 297 aa10.63□□□□□ -0.71
SCARNA1-201ENST00000517138 MBIPQ9NS73 344 aa10.63□□□□□ -0.71
SCARNA1-201ENST00000517138 DCDC2BA2VCK2 349 aa10.62□□□□□ -0.71
SCARNA1-201ENST00000517138 SLURP2P0DP57 97 aa10.62□□□□□ -0.71
SCARNA1-201ENST00000517138 WEE1P30291 646 aa10.62□□□□□ -0.71
SCARNA1-201ENST00000517138 HIRAP54198 1017 aaPredicted RBP10.62□□□□□ -0.71
SCARNA1-201ENST00000517138 ELOAQ14241 798 aaKnown RBP10.62□□□□□ -0.71
SCARNA1-201ENST00000517138 LRRC69Q6ZNQ3 347 aa10.62□□□□□ -0.71
SCARNA1-201ENST00000517138 NGLY1Q96IV0 654 aa10.62□□□□□ -0.71
SCARNA1-201ENST00000517138 PRIMPOLQ96LW4 560 aa10.62□□□□□ -0.71
SCARNA1-201ENST00000517138 IGF1RP08069 1367 aa10.62□□□□□ -0.71
SCARNA1-201ENST00000517138 C2CD2LO14523 706 aa10.61□□□□□ -0.71
SCARNA1-201ENST00000517138 IGFBP4P22692 258 aa10.61□□□□□ -0.71
SCARNA1-201ENST00000517138 CTBSQ01459 385 aa10.61□□□□□ -0.71
SCARNA1-201ENST00000517138 SRSF11Q05519 484 aaKnown RBP10.61□□□□□ -0.71
SCARNA1-201ENST00000517138 ZNF385CQ66K41 422 aaPredicted RBP10.61□□□□□ -0.71
SCARNA1-201ENST00000517138 NLRP8Q86W28 1048 aa10.61□□□□□ -0.71
SCARNA1-201ENST00000517138 ALDH16A1Q8IZ83 802 aa10.61□□□□□ -0.71
SCARNA1-201ENST00000517138 HSH2DQ96JZ2 352 aa10.61□□□□□ -0.71
SCARNA1-201ENST00000517138 CFHR5Q9BXR6 569 aa10.61□□□□□ -0.71
SCARNA1-201ENST00000517138 SLAIN2Q9P270 581 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms