RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 CST9Q5W186 159 aa8.33□□□□□ -1.08
SCARNA21.2-201ENST00000516600 SAPCD2Q86UD0 394 aa8.33□□□□□ -1.08
SCARNA21.2-201ENST00000516600 TRPM7Q96QT4 1865 aa8.33□□□□□ -1.08
SCARNA21.2-201ENST00000516600 ZNF692Q9BU19 519 aaPredicted RBP8.33□□□□□ -1.08
SCARNA21.2-201ENST00000516600 COL25A1Q9BXS0 654 aaPredicted RBP8.33□□□□□ -1.08
SCARNA21.2-201ENST00000516600 RNF123Q5XPI4 1314 aa8.32□□□□□ -1.08
SCARNA21.2-201ENST00000516600 POLRMTO00411 1230 aaKnown RBP8.32□□□□□ -1.08
SCARNA21.2-201ENST00000516600 TRAF5O00463 557 aa8.32□□□□□ -1.08
SCARNA21.2-201ENST00000516600 C21orf2O43822 256 aa8.32□□□□□ -1.08
SCARNA21.2-201ENST00000516600 C2CD5Q86YS7 1000 aa8.32□□□□□ -1.08
SCARNA21.2-201ENST00000516600 RAPGEF4Q8WZA2 1011 aa8.32□□□□□ -1.08
SCARNA21.2-201ENST00000516600 HHIPL1Q96JK4 782 aa8.32□□□□□ -1.08
SCARNA21.2-201ENST00000516600 KDM2AQ9Y2K7 1162 aa8.32□□□□□ -1.08
SCARNA21.2-201ENST00000516600 USP31Q70CQ4 1352 aa8.32□□□□□ -1.08
SCARNA21.2-201ENST00000516600 FER1L6Q2WGJ9 1857 aa8.32□□□□□ -1.08
SCARNA21.2-201ENST00000516600 H0YIN7 160 aa8.31□□□□□ -1.08
SCARNA21.2-201ENST00000516600 IP6K1Q92551 441 aa8.31□□□□□ -1.08
SCARNA21.2-201ENST00000516600 SRP68Q9UHB9 627 aaKnown RBP8.31□□□□□ -1.08
SCARNA21.2-201ENST00000516600 CD163L1Q9NR16 1453 aa8.31□□□□□ -1.08
SCARNA21.2-201ENST00000516600 ZNF541Q9H0D2 1346 aa8.3□□□□□ -1.08
SCARNA21.2-201ENST00000516600 RPS6KA4O75676 772 aa8.3□□□□□ -1.08
SCARNA21.2-201ENST00000516600 TRPA1O75762 1119 aa8.3□□□□□ -1.08
SCARNA21.2-201ENST00000516600 CELF2O95319 508 aaKnown RBP8.3□□□□□ -1.08
SCARNA21.2-201ENST00000516600 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
SCARNA21.2-201ENST00000516600 BICDL1Q6ZP65 573 aa8.3□□□□□ -1.08
SCARNA21.2-201ENST00000516600 ZIC5Q96T25 663 aa8.3□□□□□ -1.08
SCARNA21.2-201ENST00000516600 PRDM6Q9NQX0 595 aa8.3□□□□□ -1.08
SCARNA21.2-201ENST00000516600 HDAC9Q9UKV0 1011 aa8.3□□□□□ -1.08
SCARNA21.2-201ENST00000516600 CNTNAP4Q9C0A0 1308 aa8.29□□□□□ -1.08
SCARNA21.2-201ENST00000516600 USP42Q9H9J4 1324 aaKnown RBP8.29□□□□□ -1.08
SCARNA21.2-201ENST00000516600 TATP17735 454 aaPredicted RBP8.29□□□□□ -1.08
SCARNA21.2-201ENST00000516600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.29□□□□□ -1.08
SCARNA21.2-201ENST00000516600 ZNF622Q969S3 477 aaKnown RBP eCLIP8.29□□□□□ -1.08
SCARNA21.2-201ENST00000516600 TMOD3Q9NYL9 352 aa8.29□□□□□ -1.08
SCARNA21.2-201ENST00000516600 ASAP1Q9ULH1 1129 aa8.29□□□□□ -1.08
SCARNA21.2-201ENST00000516600 INSRP06213 1382 aa8.29□□□□□ -1.08
SCARNA21.2-201ENST00000516600 KTN1Q86UP2 1357 aaKnown RBP8.29□□□□□ -1.08
SCARNA21.2-201ENST00000516600 LMOD1P29536 600 aaPredicted RBP8.28□□□□□ -1.08
SCARNA21.2-201ENST00000516600 RNF186Q9NXI6 227 aa8.28□□□□□ -1.08
SCARNA21.2-201ENST00000516600 MAP3K19Q56UN5 1328 aa8.28□□□□□ -1.08
SCARNA21.2-201ENST00000516600 RGPD2P0DJD1 1756 aa8.27□□□□□ -1.08
SCARNA21.2-201ENST00000516600 CYP27B1O15528 508 aa8.27□□□□□ -1.09
SCARNA21.2-201ENST00000516600 COL9A1P20849 921 aa8.27□□□□□ -1.09
SCARNA21.2-201ENST00000516600 TM4SF1P30408 202 aa8.27□□□□□ -1.09
SCARNA21.2-201ENST00000516600 SOGA3Q5TF21 947 aa8.27□□□□□ -1.09
SCARNA21.2-201ENST00000516600 CHRDL2Q6WN34 429 aa8.27□□□□□ -1.09
SCARNA21.2-201ENST00000516600 DCAF11Q8TEB1 546 aa8.27□□□□□ -1.09
SCARNA21.2-201ENST00000516600 MPHOSPH9Q99550 1183 aa8.27□□□□□ -1.09
SCARNA21.2-201ENST00000516600 CENPJQ9HC77 1338 aaPredicted RBP8.27□□□□□ -1.09
SCARNA21.2-201ENST00000516600 KDRP35968 1356 aa8.26□□□□□ -1.09
SCARNA21.2-201ENST00000516600 UNC80Q8N2C7 3258 aa8.26□□□□□ -1.09
SCARNA21.2-201ENST00000516600 FBXO46Q6PJ61 603 aaPredicted RBP8.26□□□□□ -1.09
SCARNA21.2-201ENST00000516600 NME9Q86XW9 330 aa8.26□□□□□ -1.09
SCARNA21.2-201ENST00000516600 USHBP1Q8N6Y0 703 aa8.26□□□□□ -1.09
SCARNA21.2-201ENST00000516600 OTUD5Q96G74 571 aa8.26□□□□□ -1.09
SCARNA21.2-201ENST00000516600 ZNF408Q9H9D4 720 aa8.26□□□□□ -1.09
SCARNA21.2-201ENST00000516600 AKAP11Q9UKA4 1901 aa8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 AFDNP55196 1824 aaKnown RBP8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 POTEFA5A3E0 1075 aa8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 H0YGN5 161 aa8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 ZPR1O75312 459 aa8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 GPC2Q8N158 579 aa8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 SYNE4Q8N205 404 aa8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 RBM42Q9BTD8 480 aaKnown RBP8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 COL5A3P25940 1745 aaPredicted RBP8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 RANBP2P49792 3224 aaKnown RBP8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 SCN11AQ9UI33 1791 aa8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 KIAA0100Q14667 2235 aaKnown RBP8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 CACNA1AO00555 2505 aa8.25□□□□□ -1.09
SCARNA21.2-201ENST00000516600 PLA2G5P39877 138 aa8.24□□□□□ -1.09
SCARNA21.2-201ENST00000516600 AMPHP49418 695 aa8.24□□□□□ -1.09
SCARNA21.2-201ENST00000516600 HUNKP57058 714 aa8.24□□□□□ -1.09
SCARNA21.2-201ENST00000516600 KIF23Q02241 960 aaPredicted RBP8.24□□□□□ -1.09
SCARNA21.2-201ENST00000516600 NBPF6Q5VWK0 638 aa8.24□□□□□ -1.09
SCARNA21.2-201ENST00000516600 NBPF4Q96M43 638 aa8.24□□□□□ -1.09
SCARNA21.2-201ENST00000516600 ATG3Q9NT62 314 aa8.24□□□□□ -1.09
SCARNA21.2-201ENST00000516600 RBM27Q9P2N5 1060 aaKnown RBP8.24□□□□□ -1.09
SCARNA21.2-201ENST00000516600 CARMIL3Q8ND23 1372 aa8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 SERPINB2P05120 415 aa8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 HOXC9P31274 260 aa8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 NFIXQ14938 502 aa8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 INTS3Q68E01 1043 aaKnown RBP8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 USP50Q70EL3 339 aaPredicted RBP8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 CCDC24Q8N4L8 307 aa8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 FAM122AQ96E09 287 aa8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 STAC3Q96MF2 364 aa8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 PDZRN3Q9UPQ7 1066 aa8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 EVC2Q86UK5 1308 aa8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 NRXN2Q9P2S2 1712 aa8.23□□□□□ -1.09
SCARNA21.2-201ENST00000516600 MYH14Q7Z406 1995 aaKnown RBP8.22□□□□□ -1.09
SCARNA21.2-201ENST00000516600 ZNF831Q5JPB2 1677 aa8.22□□□□□ -1.09
SCARNA21.2-201ENST00000516600 PDE6BP35913 854 aa8.22□□□□□ -1.09
SCARNA21.2-201ENST00000516600 USPL1Q5W0Q7 1092 aa8.22□□□□□ -1.09
SCARNA21.2-201ENST00000516600 ZNF296Q8WUU4 475 aaPredicted RBP8.22□□□□□ -1.09
SCARNA21.2-201ENST00000516600 CCDC102AQ96A19 550 aa8.22□□□□□ -1.09
SCARNA21.2-201ENST00000516600 SLC4A9Q96Q91 983 aa8.22□□□□□ -1.09
SCARNA21.2-201ENST00000516600 ZNF277Q9NRM2 450 aaPredicted RBP8.22□□□□□ -1.09
SCARNA21.2-201ENST00000516600 GJA3Q9Y6H8 435 aa8.22□□□□□ -1.09
SCARNA21.2-201ENST00000516600 MON2Q7Z3U7 1717 aa8.22□□□□□ -1.09
SCARNA21.2-201ENST00000516600 FAM155AB1AL88 458 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms