RNA–Protein interactions for RNA: ENST00000516460.1

RNU4ATAC12P-201, Transcript of RNA, U4atac small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4ATAC12P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC12P-201ENST00000516460 ADCY9O60503 1353 aa11.68□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 PI4KAP2A4QPH2 592 aa11.68□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 SNRPA1P09661 255 aaKnown RBP11.68□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 BEND3Q5T5X7 828 aa11.68□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 PI4KAP1Q8N8J0 262 aa11.68□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 USP44Q9H0E7 712 aa11.68□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 DAXXQ9UER7 740 aaPredicted RBP11.68□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 ERBB4Q15303 1308 aa11.67□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 TBC1D32Q96NH3 1257 aa11.67□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 PHLPP1O60346 1717 aa11.66□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 WNK3Q9BYP7 1800 aa11.66□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 SEC24BO95487 1268 aa11.66□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 SLC39A6Q13433 755 aa11.66□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 LARP1Q6PKG0 1096 aaKnown RBP11.66□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 PLEKHM2Q8IWE5 1019 aa11.66□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 ZNF496Q96IT1 587 aaPredicted RBP11.66□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 STRN4Q9NRL3 753 aa11.66□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 LRRFIP2Q9Y608 721 aaKnown RBP11.66□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 COL16A1Q07092 1604 aaPredicted RBP11.66□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 GLI3P10071 1580 aa11.66□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 BECN1Q14457 450 aa11.65□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 PROSER3Q2NL68 480 aa11.65□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 TTC22Q5TAA0 569 aa11.65□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 LINS1Q8NG48 757 aa11.65□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 SSH3Q8TE77 659 aa11.65□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 MAP3K2Q9Y2U5 619 aa11.65□□□□□ -0.54
RNU4ATAC12P-201ENST00000516460 PRAMEF22A3QJZ6 481 aa11.64□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 RAB11FIP3O75154 756 aa11.64□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 CDC45O75419 566 aa11.64□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 ANXA1P04083 346 aa11.64□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 PDIA6Q15084 440 aa11.64□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 HSP90AB4PQ58FF6 505 aa11.64□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 LRRCC1Q9C099 1032 aa11.64□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 OSBPL3Q9H4L5 887 aa11.64□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 LRP6O75581 1613 aa11.64□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 DISP2A7MBM2 1401 aa11.63□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 TNS2Q63HR2 1409 aa11.63□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 NEXNQ0ZGT2 675 aa11.63□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 MTX1Q13505 466 aa11.63□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 POLA2Q14181 598 aa11.63□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 BTG4Q9NY30 223 aa11.63□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 TOGARAM1Q9Y4F4 1720 aa11.63□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 UTYO14607 1347 aa11.62□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 KCPQ6ZWJ8 1503 aa11.62□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 PNMA6EA0A0J9YXQ4 647 aa11.62□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 MFAP1P55081 439 aaKnown RBP11.62□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 RIC3Q7Z5B4 369 aa11.62□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 C22orf23Q9BZE7 217 aa11.62□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 C9orf78Q9NZ63 289 aaPredicted RBP11.62□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 AFDNP55196 1824 aaKnown RBP11.62□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 ARFGEF2Q9Y6D5 1785 aa11.62□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 AOX1Q06278 1338 aa11.61□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 NRAPQ86VF7 1730 aa11.61□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 TUBGCP6Q96RT7 1819 aa11.61□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 NBPF7P0C2Y1 421 aaPredicted RBP11.61□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 CASC1Q6TDU7 716 aa11.61□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 PPP1R42Q7Z4L9 355 aa11.61□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 XAGE3Q8WTP9 111 aa11.61□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 CDCA7Q9BWT1 371 aaPredicted RBP11.61□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 EXOC6BQ9Y2D4 811 aa11.61□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 NWD2Q9ULI1 1742 aa11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 ITGB4P16144 1822 aa11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 APBB1O00213 710 aa11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 GRM8O00222 908 aa11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 SMARCA5O60264 1052 aaPredicted RBP11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 TOM1O60784 492 aa11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 GSPT1P15170 499 aaKnown RBP11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 PDE1AP54750 535 aa11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 TBC1D9Q6ZT07 1266 aa11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 COPS6Q7L5N1 327 aa11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 DDX54Q8TDD1 881 aaKnown RBP11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 USP16Q9Y5T5 823 aa11.6□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 SRGAP3O43295 1099 aa11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 MYL6BP14649 208 aa11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 RBM25P49756 843 aaKnown RBP11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 AIMP1Q12904 312 aaKnown RBP11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 ANKRD13DQ6ZTN6 518 aa11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 LRP10Q7Z4F1 713 aa11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 C16orf71Q8IYS4 520 aaPredicted RBP11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 KIF1BPQ96EK5 621 aa11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 TEX13AQ9BXU3 409 aaPredicted RBP11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 TMOD3Q9NYL9 352 aa11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 STAP2Q9UGK3 403 aa11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 SALL3Q9BXA9 1300 aa11.59□□□□□ -0.55
RNU4ATAC12P-201ENST00000516460 NUP188Q5SRE5 1749 aa11.58□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 COL15A1P39059 1388 aa11.58□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 SURF6O75683 361 aaKnown RBP11.58□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 MX1P20591 662 aa11.58□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 ERC1Q8IUD2 1116 aa11.58□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 VSIG10Q8N0Z9 540 aa11.58□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 PLBD2Q8NHP8 589 aa11.58□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 OTUD7AQ8TE49 926 aaPredicted RBP11.58□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 THRAP3Q9Y2W1 955 aaKnown RBP11.58□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 AK9Q5TCS8 1911 aa11.57□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 NEURL1BA8MQ27 555 aa11.57□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 GCKRQ14397 625 aa11.57□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 CWF19L2Q2TBE0 894 aaKnown RBP11.57□□□□□ -0.56
RNU4ATAC12P-201ENST00000516460 RHPN1Q8TCX5 695 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms