RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 ALPK3Q96L96 1907 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 DNAH14Q0VDD8 3507 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 LAMB1P07942 1786 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 BCORQ6W2J9 1755 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 KDM3BQ7LBC6 1761 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 FAM155AB1AL88 458 aaPredicted RBP3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 TM4SF1P30408 202 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 DDR1Q08345 913 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 ITPK1Q13572 414 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 MAP1SQ66K74 1059 aaPredicted RBP3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 CIAPIN1Q6FI81 312 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 SAPCD2Q86UD0 394 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 SLC4A9Q96Q91 983 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 RBM27Q9P2N5 1060 aaKnown RBP3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 CCDC61Q9Y6R9 512 aa3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 EIF3AQ14152 1382 aaKnown RBP3.72□□□□□ -1.81
RNU1-48P-201ENST00000516400 MINK1Q8N4C8 1332 aaPredicted RBP3.71□□□□□ -1.81
RNU1-48P-201ENST00000516400 NCOR1O75376 2440 aa3.71□□□□□ -1.82
RNU1-48P-201ENST00000516400 NPM3O75607 178 aaKnown RBP3.71□□□□□ -1.82
RNU1-48P-201ENST00000516400 ECE1P42892 770 aa3.71□□□□□ -1.82
RNU1-48P-201ENST00000516400 RGL3Q3MIN7 710 aa3.71□□□□□ -1.82
RNU1-48P-201ENST00000516400 DPY19L2Q6NUT2 758 aa3.71□□□□□ -1.82
RNU1-48P-201ENST00000516400 NLGN1Q8N2Q7 840 aa3.71□□□□□ -1.82
RNU1-48P-201ENST00000516400 ARHGEF1Q92888 912 aaKnown RBP3.71□□□□□ -1.82
RNU1-48P-201ENST00000516400 PALLDQ8WX93 1383 aa3.71□□□□□ -1.82
RNU1-48P-201ENST00000516400 USP47Q96K76 1375 aa3.71□□□□□ -1.82
RNU1-48P-201ENST00000516400 CFAP47Q6ZTR5 3102 aa3.71□□□□□ -1.82
RNU1-48P-201ENST00000516400 LTBP3Q9NS15 1303 aa3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 ANKRD26Q9UPS8 1709 aa3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 NLRP6P59044 892 aa3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 SRPK2P78362 688 aaKnown RBP3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 NBPF1Q3BBV0 1214 aa3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 CTU1Q7Z7A3 348 aaKnown RBP3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 DDX54Q8TDD1 881 aaKnown RBP3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 CDK19Q9BWU1 502 aa3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 RNF186Q9NXI6 227 aa3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 SAGE1Q9NXZ1 904 aa3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 COL4A5P29400 1685 aa3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 TRIOO75962 3097 aa3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 SNED1Q8TER0 1413 aa3.7□□□□□ -1.82
RNU1-48P-201ENST00000516400 KDRP35968 1356 aa3.69□□□□□ -1.82
RNU1-48P-201ENST00000516400 H0YGN5 161 aa3.69□□□□□ -1.82
RNU1-48P-201ENST00000516400 POLRMTO00411 1230 aaKnown RBP3.69□□□□□ -1.82
RNU1-48P-201ENST00000516400 PHF14O94880 888 aa3.69□□□□□ -1.82
RNU1-48P-201ENST00000516400 TMF1P82094 1093 aa3.69□□□□□ -1.82
RNU1-48P-201ENST00000516400 BEGAINQ9BUH8 593 aa3.69□□□□□ -1.82
RNU1-48P-201ENST00000516400 CCDC87Q9NVE4 849 aa3.69□□□□□ -1.82
RNU1-48P-201ENST00000516400 PGAP2Q9UHJ9 254 aa3.69□□□□□ -1.82
RNU1-48P-201ENST00000516400 STXBP5LQ9Y2K9 1186 aa3.69□□□□□ -1.82
RNU1-48P-201ENST00000516400 SMG6Q86US8 1419 aaKnown RBP3.69□□□□□ -1.82
RNU1-48P-201ENST00000516400 BAHCC1Q9P281 2608 aa3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 TJP1Q07157 1748 aa3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 TRAF5O00463 557 aa3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 EPHX2P34913 555 aa3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 FKBP8Q14318 412 aa3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 ERFEQ4G0M1 354 aa3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 C7orf43Q8WVR3 580 aa3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 SYTL4Q96C24 671 aaPredicted RBP3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 LRCH3Q96II8 777 aa3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 POGKQ9P215 609 aa3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 ABT1Q9ULW3 272 aaKnown RBP3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 TRAK1Q9UPV9 953 aa3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 ZNF541Q9H0D2 1346 aa3.68□□□□□ -1.82
RNU1-48P-201ENST00000516400 ZNF646O15015 1829 aaPredicted RBP3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 USP31Q70CQ4 1352 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 LOC102724428A0A0B4J2F2 783 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 IQCA1LA6NCM1 817 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 FZD9O00144 591 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 EN2P19622 333 aaPredicted RBP3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 SIK1P57059 783 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 PKN2Q16513 984 aaKnown RBP3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 GPR153Q6NV75 609 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 PIGBQ92521 554 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 AK7Q96M32 723 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 CSRNP1Q96S65 589 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 MTMR10Q9NXD2 777 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 CHD9Q3L8U1 2897 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 WDR87Q6ZQQ6 2873 aa3.67□□□□□ -1.82
RNU1-48P-201ENST00000516400 CARMIL3Q8ND23 1372 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 ASPMQ8IZT6 3477 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 CYP27B1O15528 508 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 RPS6KA4O75676 772 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 CSB-PGBD3P0DP91 1061 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 CAP1Q01518 475 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 APLP2Q06481 763 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 NKX1-1Q15270 411 aaPredicted RBP3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 NOM1Q5C9Z4 860 aaKnown RBP3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 TRAPPC3LQ5T215 181 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 RC3H1Q5TC82 1133 aaKnown RBP3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 FBXO46Q6PJ61 603 aaPredicted RBP3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 CHRDL2Q6WN34 429 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 PNMA8AQ86V59 439 aaPredicted RBP3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 TTLL6Q8N841 843 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 KCNH5Q8NCM2 988 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 ZCRB1Q8TBF4 217 aaKnown RBP3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 ANKRD24Q8TF21 1146 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 NLRP2Q9NX02 1062 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 HACL1Q9UJ83 578 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 ARIH1Q9Y4X5 557 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms