RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 LRP6O75581 1613 aa7.48□□□□□ -1.21
RN7SKP288-201ENST00000516227 COL5A3P25940 1745 aaPredicted RBP7.47□□□□□ -1.21
RN7SKP288-201ENST00000516227 MYH13Q9UKX3 1938 aa7.47□□□□□ -1.21
RN7SKP288-201ENST00000516227 PRAMEF22A3QJZ6 481 aa7.47□□□□□ -1.21
RN7SKP288-201ENST00000516227 ERVV-2B6SEH9 535 aa7.47□□□□□ -1.21
RN7SKP288-201ENST00000516227 NPM2Q86SE8 214 aaKnown RBP7.47□□□□□ -1.21
RN7SKP288-201ENST00000516227 FMNL2Q96PY5 1086 aa7.47□□□□□ -1.21
RN7SKP288-201ENST00000516227 MEIS3Q99687 375 aa7.47□□□□□ -1.21
RN7SKP288-201ENST00000516227 HYPKQ9NX55 129 aa7.47□□□□□ -1.21
RN7SKP288-201ENST00000516227 A0A0G2JS52 829 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 EXOC5O00471 708 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 HMMRO75330 724 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 DDX58O95786 925 aaKnown RBP7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 GNAI3P08754 354 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 SNRPA1P09661 255 aaKnown RBP7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 MYL6BP14649 208 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 AIMP1Q12904 312 aaKnown RBP7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 FAM161AQ3B820 660 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 ANKRD45Q5TZF3 282 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 RPAP2Q8IXW5 612 aaPredicted RBP7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 DNAAF4Q8WXU2 420 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 GCC1Q96CN9 775 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 ZNF496Q96IT1 587 aaPredicted RBP7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 BACH2Q9BYV9 841 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 SRCIN1Q9C0H9 1055 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 TMOD3Q9NYL9 352 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 MYO5AQ9Y4I1 1855 aaKnown RBP7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 KCPQ6ZWJ8 1503 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 HEG1Q9ULI3 1381 aa7.46□□□□□ -1.22
RN7SKP288-201ENST00000516227 PI4KAP2A4QPH2 592 aa7.45□□□□□ -1.22
RN7SKP288-201ENST00000516227 GNAI2P04899 355 aa7.45□□□□□ -1.22
RN7SKP288-201ENST00000516227 ANP32AP39687 249 aaKnown RBP7.45□□□□□ -1.22
RN7SKP288-201ENST00000516227 RIC3Q7Z5B4 369 aa7.45□□□□□ -1.22
RN7SKP288-201ENST00000516227 SMC5Q8IY18 1101 aa7.45□□□□□ -1.22
RN7SKP288-201ENST00000516227 ANKRD44Q8N8A2 993 aa7.45□□□□□ -1.22
RN7SKP288-201ENST00000516227 PI4KAP1Q8N8J0 262 aa7.45□□□□□ -1.22
RN7SKP288-201ENST00000516227 LNPKQ9C0E8 428 aa7.45□□□□□ -1.22
RN7SKP288-201ENST00000516227 DDX21Q9NR30 783 aaKnown RBP eCLIP7.45□□□□□ -1.22
RN7SKP288-201ENST00000516227 MAP3K2Q9Y2U5 619 aa7.45□□□□□ -1.22
RN7SKP288-201ENST00000516227 TAF1P21675 1872 aa7.45□□□□□ -1.22
RN7SKP288-201ENST00000516227 DISP2A7MBM2 1401 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 APBB1O00213 710 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 PTCD1O75127 700 aaKnown RBP7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 UBTFL1P0CB47 393 aaPredicted RBP7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 NUCB1Q02818 461 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 NKX1-1Q15270 411 aaPredicted RBP7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 PROSER3Q2NL68 480 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 CEP85Q6P2H3 762 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 CHD1LQ86WJ1 897 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 SYTL4Q96C24 671 aaPredicted RBP7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 NGLY1Q96IV0 654 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 USP16Q9Y5T5 823 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 ADCY9O60503 1353 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 JCADQ9P266 1359 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 LY75O60449 1722 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 TNS2Q63HR2 1409 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 ATP10DQ9P241 1426 aa7.44□□□□□ -1.22
RN7SKP288-201ENST00000516227 LAMB2P55268 1798 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 BCORQ6W2J9 1755 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 CHD4Q14839 1912 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 PIP4K2AP48426 406 aaPredicted RBP7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 NEXNQ0ZGT2 675 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 DDB1Q16531 1140 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 KSR2Q6VAB6 950 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 SIRT2Q8IXJ6 389 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 CERKQ8TCT0 537 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 C8orf37Q96NL8 207 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 RBM42Q9BTD8 480 aaKnown RBP7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 CDCA7Q9BWT1 371 aaPredicted RBP7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 C9orf78Q9NZ63 289 aaPredicted RBP7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 LRRFIP2Q9Y608 721 aaKnown RBP7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 ZNF831Q5JPB2 1677 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 NHSQ6T4R5 1651 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 SPATA31A1Q5TZJ5 1347 aa7.43□□□□□ -1.22
RN7SKP288-201ENST00000516227 SLIT2O94813 1529 aa7.42□□□□□ -1.22
RN7SKP288-201ENST00000516227 ATP8B2P98198 1209 aa7.42□□□□□ -1.22
RN7SKP288-201ENST00000516227 MYT1Q01538 1121 aa7.42□□□□□ -1.22
RN7SKP288-201ENST00000516227 C8orf34Q49A92 452 aa7.42□□□□□ -1.22
RN7SKP288-201ENST00000516227 MEX3CQ5U5Q3 659 aaKnown RBP7.42□□□□□ -1.22
RN7SKP288-201ENST00000516227 COPS6Q7L5N1 327 aa7.42□□□□□ -1.22
RN7SKP288-201ENST00000516227 XAGE3Q8WTP9 111 aa7.42□□□□□ -1.22
RN7SKP288-201ENST00000516227 USP44Q9H0E7 712 aa7.42□□□□□ -1.22
RN7SKP288-201ENST00000516227 DCTPP1Q9H773 170 aa7.42□□□□□ -1.22
RN7SKP288-201ENST00000516227 THRAP3Q9Y2W1 955 aaKnown RBP7.42□□□□□ -1.22
RN7SKP288-201ENST00000516227 CICQ96RK0 1608 aaPredicted RBP7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 RREB1Q92766 1687 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 LAMA4Q16363 1823 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 ALDH1L1O75891 902 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 PDIA6Q15084 440 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 BEND3Q5T5X7 828 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 ANKRD13DQ6ZTN6 518 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 ARXQ96QS3 562 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 MYD88Q99836 296 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 HDAC5Q9UQL6 1122 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 ZNF330Q9Y3S2 320 aaPredicted RBP7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 SPATA31A5Q5VU36 1347 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 SPATA31A7Q8IWB4 1347 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 THSD7AQ9UPZ6 1657 aa7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 DDX60Q8IY21 1712 aaKnown RBP7.41□□□□□ -1.22
RN7SKP288-201ENST00000516227 A0A1B0GUL6 1792 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms