RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 UBE2HP62256 183 aa12.13□□□□□ -0.47
SMG7-215ENST00000515829 DNM1Q05193 864 aaKnown RBP12.13□□□□□ -0.47
SMG7-215ENST00000515829 PPP6R1Q9UPN7 881 aa12.13□□□□□ -0.47
SMG7-215ENST00000515829 ME1P48163 572 aa12.13□□□□□ -0.47
SMG7-215ENST00000515829 GADD45BO75293 160 aaPredicted RBP12.12□□□□□ -0.47
SMG7-215ENST00000515829 ANKRD1Q15327 319 aa12.12□□□□□ -0.47
SMG7-215ENST00000515829 CHL1O00533 1208 aa12.12□□□□□ -0.47
SMG7-215ENST00000515829 SMC2O95347 1197 aa12.12□□□□□ -0.47
SMG7-215ENST00000515829 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
SMG7-215ENST00000515829 CEBPAP49715 358 aaPredicted RBP12.12□□□□□ -0.47
SMG7-215ENST00000515829 SYNE3Q6ZMZ3 975 aa12.12□□□□□ -0.47
SMG7-215ENST00000515829 NOL7Q9UMY1 257 aaKnown RBP12.12□□□□□ -0.47
SMG7-215ENST00000515829 AMOTL2Q9Y2J4 779 aa12.12□□□□□ -0.47
SMG7-215ENST00000515829 AK2P54819 239 aa12.12□□□□□ -0.47
SMG7-215ENST00000515829 PHAXQ9H814 394 aaKnown RBP12.12□□□□□ -0.47
SMG7-215ENST00000515829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.12□□□□□ -0.472e-6■■■□□ 16.4
SMG7-215ENST00000515829 ANAPC15P60006 121 aa12.12□□□□□ -0.47
SMG7-215ENST00000515829 NOLC1Q14978 699 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMG7-215ENST00000515829 PDCL2Q8N4E4 241 aa12.12□□□□□ -0.47
SMG7-215ENST00000515829 GPT2Q8TD30 523 aa12.12□□□□□ -0.47
SMG7-215ENST00000515829 CLTCL1P53675 1640 aa12.11□□□□□ -0.47
SMG7-215ENST00000515829 ERBB4Q15303 1308 aa12.11□□□□□ -0.47
SMG7-215ENST00000515829 C17orf53Q8N3J3 647 aaPredicted RBP12.11□□□□□ -0.47
SMG7-215ENST00000515829 ECHDC1Q9NTX5 307 aa12.11□□□□□ -0.47
SMG7-215ENST00000515829 CHPF2Q9P2E5 772 aa12.11□□□□□ -0.47
SMG7-215ENST00000515829 PALD1Q9ULE6 856 aa12.11□□□□□ -0.47
SMG7-215ENST00000515829 CCDC112Q8NEF3 446 aa12.11□□□□□ -0.47
SMG7-215ENST00000515829 C16orf45Q96MC5 204 aaPredicted RBP12.11□□□□□ -0.47
SMG7-215ENST00000515829 CPLX2Q6PUV4 134 aaKnown RBP12.11□□□□□ -0.47
SMG7-215ENST00000515829 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
SMG7-215ENST00000515829 PA2G4Q9UQ80 394 aaKnown RBP12.11□□□□□ -0.47
SMG7-215ENST00000515829 UNC13BO14795 1591 aa12.11□□□□□ -0.47
SMG7-215ENST00000515829 MYOM2P54296 1465 aa12.1□□□□□ -0.47
SMG7-215ENST00000515829 DYNC1I1O14576 645 aa12.1□□□□□ -0.47
SMG7-215ENST00000515829 EYA1Q99502 592 aa12.1□□□□□ -0.47
SMG7-215ENST00000515829 SH2B1Q9NRF2 756 aaPredicted RBP12.1□□□□□ -0.47
SMG7-215ENST00000515829 MAP3K2Q9Y2U5 619 aa12.1□□□□□ -0.47
SMG7-215ENST00000515829 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
SMG7-215ENST00000515829 GUCY1B3Q02153 619 aa12.1□□□□□ -0.47
SMG7-215ENST00000515829 MADDQ8WXG6 1647 aa12.1□□□□□ -0.47
SMG7-215ENST00000515829 F13A1P00488 732 aa12.09□□□□□ -0.47
SMG7-215ENST00000515829 HS1BP3Q53T59 392 aa12.09□□□□□ -0.47
SMG7-215ENST00000515829 CDC42BPBQ9Y5S2 1711 aa12.09□□□□□ -0.47
SMG7-215ENST00000515829 CLSTN1O94985 981 aa12.09□□□□□ -0.47
SMG7-215ENST00000515829 STK38Q15208 465 aa12.09□□□□□ -0.47
SMG7-215ENST00000515829 RALYLQ86SE5 291 aaKnown RBP12.09□□□□□ -0.47
SMG7-215ENST00000515829 NAT10Q9H0A0 1025 aaKnown RBP12.09□□□□□ -0.47
SMG7-215ENST00000515829 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
SMG7-215ENST00000515829 SYT1P21579 422 aa12.09□□□□□ -0.47
SMG7-215ENST00000515829 RASSF8Q8NHQ8 419 aa12.09□□□□□ -0.47
SMG7-215ENST00000515829 TRDNQ13061 729 aa12.09□□□□□ -0.47
SMG7-215ENST00000515829 STK11IPQ8N1F8 1099 aa12.09□□□□□ -0.47
SMG7-215ENST00000515829 ZHX1Q9UKY1 873 aaPredicted RBP12.09□□□□□ -0.47
SMG7-215ENST00000515829 PIK3R4Q99570 1358 aa12.09□□□□□ -0.47
SMG7-215ENST00000515829 G3V3G9 751 aa12.08□□□□□ -0.48
SMG7-215ENST00000515829 DCAF8Q5TAQ9 597 aa12.08□□□□□ -0.48
SMG7-215ENST00000515829 NFXL1Q6ZNB6 911 aa12.08□□□□□ -0.48
SMG7-215ENST00000515829 PPP1R9BQ96SB3 815 aa12.08□□□□□ -0.48
SMG7-215ENST00000515829 MAP3K19Q56UN5 1328 aa12.08□□□□□ -0.48
SMG7-215ENST00000515829 INTS4Q96HW7 963 aaKnown RBP12.08□□□□□ -0.48
SMG7-215ENST00000515829 RTL1A6NKG5 1358 aa12.08□□□□□ -0.48
SMG7-215ENST00000515829 EVA1CP58658 441 aa12.08□□□□□ -0.48
SMG7-215ENST00000515829 UVSSAQ2YD98 709 aa12.08□□□□□ -0.48
SMG7-215ENST00000515829 PPP4R3BQ5MIZ7 849 aa12.08□□□□□ -0.48
SMG7-215ENST00000515829 SCAND2PQ9GZW5 306 aaPredicted RBP12.08□□□□□ -0.48
SMG7-215ENST00000515829 TRIM29Q14134 588 aa12.07□□□□□ -0.48
SMG7-215ENST00000515829 CFAP45Q9UL16 551 aa12.07□□□□□ -0.48
SMG7-215ENST00000515829 PLXNC1O60486 1568 aa12.07□□□□□ -0.48
SMG7-215ENST00000515829 FAM173BQ6P4H8 233 aa12.07□□□□□ -0.48
SMG7-215ENST00000515829 EVI5LQ96CN4 794 aa12.07□□□□□ -0.48
SMG7-215ENST00000515829 ZNF396Q96N95 335 aaPredicted RBP12.07□□□□□ -0.48
SMG7-215ENST00000515829 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
SMG7-215ENST00000515829 DBF4Q9UBU7 674 aaPredicted RBP12.07□□□□□ -0.48
SMG7-215ENST00000515829 ATP2B1P20020 1258 aa12.07□□□□□ -0.48
SMG7-215ENST00000515829 PDILTQ8N807 584 aa12.07□□□□□ -0.48
SMG7-215ENST00000515829 CLIP2Q9UDT6 1046 aa12.07□□□□□ -0.48
SMG7-215ENST00000515829 RBM8AQ9Y5S9 174 aaKnown RBP12.07□□□□□ -0.48
SMG7-215ENST00000515829 ZC3H6P61129 1189 aaKnown RBP12.07□□□□□ -0.48
SMG7-215ENST00000515829 FKBP4Q02790 459 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMG7-215ENST00000515829 TSC1Q92574 1164 aa12.07□□□□□ -0.48
SMG7-215ENST00000515829 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
SMG7-215ENST00000515829 POGZQ7Z3K3 1410 aa12.07□□□□□ -0.48
SMG7-215ENST00000515829 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
SMG7-215ENST00000515829 SOS1Q07889 1333 aaPredicted RBP12.06□□□□□ -0.48
SMG7-215ENST00000515829 CCT2P78371 535 aaKnown RBP12.06□□□□□ -0.48
SMG7-215ENST00000515829 MNS1Q8NEH6 495 aa12.06□□□□□ -0.48
SMG7-215ENST00000515829 MYD88Q99836 296 aa12.06□□□□□ -0.48
SMG7-215ENST00000515829 TRMT1Q9NXH9 659 aaKnown RBP12.06□□□□□ -0.48
SMG7-215ENST00000515829 PES1O00541 588 aaKnown RBP12.06□□□□□ -0.48
SMG7-215ENST00000515829 AKAP17AQ02040 695 aaKnown RBP12.06□□□□□ -0.48
SMG7-215ENST00000515829 KIF2CQ99661 725 aa12.06□□□□□ -0.48
SMG7-215ENST00000515829 NSFL1CQ9UNZ2 370 aaKnown RBP12.06□□□□□ -0.48
SMG7-215ENST00000515829 BRD1O95696 1058 aa12.06□□□□□ -0.48
SMG7-215ENST00000515829 ZNF165P49910 485 aa12.06□□□□□ -0.48
SMG7-215ENST00000515829 DACT1Q9NYF0 836 aa12.06□□□□□ -0.48
SMG7-215ENST00000515829 TNNT1P13805 278 aa12.06□□□□□ -0.48
SMG7-215ENST00000515829 CCDC186Q7Z3E2 898 aa12.05□□□□□ -0.48
SMG7-215ENST00000515829 FAM177A1Q8N128 213 aaPredicted RBP12.05□□□□□ -0.48
SMG7-215ENST00000515829 CWF19L2Q2TBE0 894 aaKnown RBP12.05□□□□□ -0.48
SMG7-215ENST00000515829 ZFYVE16Q7Z3T8 1539 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms