RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 RTF1Q92541 710 aaKnown RBP16.03■□□□□ 0.16
SDHA-219ENST00000515815 PHACTR3Q96KR7 559 aa16.03■□□□□ 0.16
SDHA-219ENST00000515815 SBF1O95248 1867 aa16.03■□□□□ 0.16
SDHA-219ENST00000515815 UTRNP46939 3433 aa16.03■□□□□ 0.16
SDHA-219ENST00000515815 MAPK8IP3Q9UPT6 1336 aa16.02■□□□□ 0.16
SDHA-219ENST00000515815 FCHSD2O94868 740 aa16.02■□□□□ 0.16
SDHA-219ENST00000515815 ZBTB1Q9Y2K1 713 aa16.02■□□□□ 0.16
SDHA-219ENST00000515815 CYP19A1P11511 503 aaPredicted RBP16.01■□□□□ 0.15
SDHA-219ENST00000515815 YBX3P16989 372 aaKnown RBP eCLIP16.01■□□□□ 0.15
SDHA-219ENST00000515815 INTS5Q6P9B9 1019 aaKnown RBP16.01■□□□□ 0.15
SDHA-219ENST00000515815 ZNF790Q6PG37 636 aa16.01■□□□□ 0.15
SDHA-219ENST00000515815 IL17REQ8NFR9 667 aa16.01■□□□□ 0.15
SDHA-219ENST00000515815 PARP3Q9Y6F1 533 aa16.01■□□□□ 0.15
SDHA-219ENST00000515815 TNRC6CQ9HCJ0 1690 aaKnown RBP16.01■□□□□ 0.15
SDHA-219ENST00000515815 GOLGB1Q14789 3259 aaKnown RBP16■□□□□ 0.15
SDHA-219ENST00000515815 MYBBP1AQ9BQG0 1328 aaKnown RBP16■□□□□ 0.15
SDHA-219ENST00000515815 RALBP1Q15311 655 aa16■□□□□ 0.15
SDHA-219ENST00000515815 FMNL2Q96PY5 1086 aa16■□□□□ 0.15
SDHA-219ENST00000515815 SRP68Q9UHB9 627 aaKnown RBP16■□□□□ 0.15
SDHA-219ENST00000515815 BTBD11A6QL63 1104 aa15.99■□□□□ 0.15
SDHA-219ENST00000515815 GRIN3BO60391 1043 aa15.99■□□□□ 0.15
SDHA-219ENST00000515815 DICER1Q9UPY3 1922 aaKnown RBP15.98■□□□□ 0.15
SDHA-219ENST00000515815 ZPR1O75312 459 aa15.98■□□□□ 0.15
SDHA-219ENST00000515815 STARD3NLO95772 234 aa15.98■□□□□ 0.15
SDHA-219ENST00000515815 MCM10Q7L590 875 aa15.98■□□□□ 0.15
SDHA-219ENST00000515815 ZNF496Q96IT1 587 aaPredicted RBP15.98■□□□□ 0.15
SDHA-219ENST00000515815 DDX10Q13206 875 aaKnown RBP15.97■□□□□ 0.15
SDHA-219ENST00000515815 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.15
SDHA-219ENST00000515815 FKBP8Q14318 412 aa15.96■□□□□ 0.15
SDHA-219ENST00000515815 USPL1Q5W0Q7 1092 aa15.96■□□□□ 0.15
SDHA-219ENST00000515815 PNNQ9H307 717 aaKnown RBP15.96■□□□□ 0.15
SDHA-219ENST00000515815 WWC3Q9ULE0 1092 aa15.96■□□□□ 0.15
SDHA-219ENST00000515815 ZNF330Q9Y3S2 320 aaPredicted RBP15.96■□□□□ 0.15
SDHA-219ENST00000515815 FER1L6Q2WGJ9 1857 aa15.95■□□□□ 0.14
SDHA-219ENST00000515815 HTATSF1O43719 755 aaKnown RBP15.95■□□□□ 0.14
SDHA-219ENST00000515815 DDR1Q08345 913 aa15.95■□□□□ 0.14
SDHA-219ENST00000515815 ZNF784Q8NCA9 323 aaPredicted RBP15.95■□□□□ 0.14
SDHA-219ENST00000515815 TEX13AQ9BXU3 409 aaPredicted RBP15.95■□□□□ 0.14
SDHA-219ENST00000515815 NARFQ9UHQ1 456 aa15.95■□□□□ 0.14
SDHA-219ENST00000515815 ADCY9O60503 1353 aa15.95■□□□□ 0.14
SDHA-219ENST00000515815 ATP10DQ9P241 1426 aa15.94■□□□□ 0.14
SDHA-219ENST00000515815 DCTN1Q14203 1278 aa15.94■□□□□ 0.14
SDHA-219ENST00000515815 LAMB2P55268 1798 aa15.94■□□□□ 0.14
SDHA-219ENST00000515815 CARMIL3Q8ND23 1372 aa15.93■□□□□ 0.14
SDHA-219ENST00000515815 A0A087WZG4 1122 aa15.93■□□□□ 0.14
SDHA-219ENST00000515815 POLRMTO00411 1230 aaKnown RBP15.93■□□□□ 0.14
SDHA-219ENST00000515815 TGFB2P61812 414 aa15.93■□□□□ 0.14
SDHA-219ENST00000515815 NFE2L2Q16236 605 aa15.93■□□□□ 0.14
SDHA-219ENST00000515815 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
SDHA-219ENST00000515815 PLEKHF1Q96S99 279 aa15.92■□□□□ 0.14
SDHA-219ENST00000515815 KCNQ3O43525 872 aa15.91■□□□□ 0.14
SDHA-219ENST00000515815 IL6STP40189 918 aaPredicted RBP15.91■□□□□ 0.14
SDHA-219ENST00000515815 ZEB1P37275 1124 aaPredicted RBP15.9■□□□□ 0.14
SDHA-219ENST00000515815 EIF5P55010 431 aaKnown RBP15.9■□□□□ 0.14
SDHA-219ENST00000515815 SNRPA1P09661 255 aaKnown RBP15.89■□□□□ 0.13
SDHA-219ENST00000515815 DPEP1P16444 411 aa15.89■□□□□ 0.13
SDHA-219ENST00000515815 NFIXQ14938 502 aa15.89■□□□□ 0.13
SDHA-219ENST00000515815 WDR43Q15061 677 aaKnown RBP eCLIP15.89■□□□□ 0.13
SDHA-219ENST00000515815 PNISRQ8TF01 805 aaKnown RBP15.89■□□□□ 0.13
SDHA-219ENST00000515815 BCS1LQ9Y276 419 aa15.89■□□□□ 0.13
SDHA-219ENST00000515815 LMOD3Q0VAK6 560 aa15.88■□□□□ 0.13
SDHA-219ENST00000515815 BCL2L12Q9HB09 334 aa15.88■□□□□ 0.13
SDHA-219ENST00000515815 SLX4Q8IY92 1834 aa15.87■□□□□ 0.13
SDHA-219ENST00000515815 A0A0G2JLW4 131 aa15.87■□□□□ 0.13
SDHA-219ENST00000515815 PRAMEF22A3QJZ6 481 aa15.87■□□□□ 0.13
SDHA-219ENST00000515815 A1BGP04217 495 aa15.87■□□□□ 0.13
SDHA-219ENST00000515815 TM4SF1P30408 202 aa15.87■□□□□ 0.13
SDHA-219ENST00000515815 TAF7Q15545 349 aaPredicted RBP15.87■□□□□ 0.13
SDHA-219ENST00000515815 GIGYF1O75420 1035 aaPredicted RBP15.86■□□□□ 0.13
SDHA-219ENST00000515815 DZIP3Q86Y13 1208 aaKnown RBP15.86■□□□□ 0.13
SDHA-219ENST00000515815 THUMPD2Q9BTF0 503 aaKnown RBP15.86■□□□□ 0.13
SDHA-219ENST00000515815 ZNF652Q9Y2D9 606 aa15.86■□□□□ 0.13
SDHA-219ENST00000515815 NPHP1O15259 732 aa15.85■□□□□ 0.13
SDHA-219ENST00000515815 SERPINB2P05120 415 aa15.85■□□□□ 0.13
SDHA-219ENST00000515815 PIP4K2AP48426 406 aaPredicted RBP15.85■□□□□ 0.13
SDHA-219ENST00000515815 TBC1D9BQ66K14 1250 aa15.85■□□□□ 0.13
SDHA-219ENST00000515815 BICDL1Q6ZP65 573 aa15.85■□□□□ 0.13
SDHA-219ENST00000515815 PRKRIP1Q9H875 184 aaPredicted RBP15.85■□□□□ 0.13
SDHA-219ENST00000515815 PIM2Q9P1W9 311 aa15.85■□□□□ 0.13
SDHA-219ENST00000515815 TBC1D2BQ9UPU7 963 aa15.85■□□□□ 0.13
SDHA-219ENST00000515815 DDX60Q8IY21 1712 aaKnown RBP15.85■□□□□ 0.13
SDHA-219ENST00000515815 CAMTA2O94983 1202 aa15.84■□□□□ 0.13
SDHA-219ENST00000515815 CHRNA5P30532 468 aa15.84■□□□□ 0.13
SDHA-219ENST00000515815 USP16Q9Y5T5 823 aa15.84■□□□□ 0.13
SDHA-219ENST00000515815 DALRD3Q5D0E6 543 aaKnown RBP15.83■□□□□ 0.12
SDHA-219ENST00000515815 CCDC146Q8IYE0 955 aa15.83■□□□□ 0.12
SDHA-219ENST00000515815 CNBD1Q8NA66 436 aa15.83■□□□□ 0.12
SDHA-219ENST00000515815 TSPYL4Q9UJ04 414 aa15.83■□□□□ 0.12
SDHA-219ENST00000515815 RIPK4P57078 832 aa15.82■□□□□ 0.12
SDHA-219ENST00000515815 MIS18AQ9NYP9 233 aa15.82■□□□□ 0.12
SDHA-219ENST00000515815 WDR90Q96KV7 1748 aa15.82■□□□□ 0.12
SDHA-219ENST00000515815 TMPOP42166 694 aaKnown RBP15.81■□□□□ 0.12
SDHA-219ENST00000515815 ST5P78524 1137 aa15.81■□□□□ 0.12
SDHA-219ENST00000515815 ERBB4Q15303 1308 aa15.81■□□□□ 0.12
SDHA-219ENST00000515815 MYH3P11055 1940 aa15.8■□□□□ 0.12
SDHA-219ENST00000515815 KCNA3P22001 575 aa15.8■□□□□ 0.12
SDHA-219ENST00000515815 EIF4A1P60842 406 aaKnown RBP15.8■□□□□ 0.12
SDHA-219ENST00000515815 PRR5LQ6MZQ0 368 aa15.8■□□□□ 0.12
SDHA-219ENST00000515815 ZNF526Q8TF50 670 aaPredicted RBP15.8■□□□□ 0.12
SDHA-219ENST00000515815 RUNDC1Q96C34 613 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms