RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 SSH3Q8TE77 659 aa18.89■□□□□ 0.61
SDHA-218ENST00000515752 ADCY9O60503 1353 aa18.88■□□□□ 0.61
SDHA-218ENST00000515752 COL5A2P05997 1499 aaPredicted RBP18.88■□□□□ 0.61
SDHA-218ENST00000515752 SNRPA1P09661 255 aaKnown RBP18.88■□□□□ 0.61
SDHA-218ENST00000515752 TBC1D9Q6ZT07 1266 aa18.88■□□□□ 0.61
SDHA-218ENST00000515752 ZCRB1Q8TBF4 217 aaKnown RBP18.88■□□□□ 0.61
SDHA-218ENST00000515752 CABP4P57796 275 aa18.88■□□□□ 0.61
SDHA-218ENST00000515752 FMNL2Q96PY5 1086 aa18.88■□□□□ 0.61
SDHA-218ENST00000515752 GSPT1P15170 499 aaKnown RBP18.87■□□□□ 0.61
SDHA-218ENST00000515752 HSP90AB4PQ58FF6 505 aa18.87■□□□□ 0.61
SDHA-218ENST00000515752 RTL5Q5HYW3 569 aaPredicted RBP18.87■□□□□ 0.61
SDHA-218ENST00000515752 NHSL1Q5SYE7 1610 aa18.87■□□□□ 0.61
SDHA-218ENST00000515752 PNMA6EA0A0J9YXQ4 647 aa18.86■□□□□ 0.61
SDHA-218ENST00000515752 ERVV-2B6SEH9 535 aa18.86■□□□□ 0.61
SDHA-218ENST00000515752 IL2RBP14784 551 aa18.86■□□□□ 0.61
SDHA-218ENST00000515752 SLC4A3P48751 1232 aa18.86■□□□□ 0.61
SDHA-218ENST00000515752 POLA2Q14181 598 aa18.86■□□□□ 0.61
SDHA-218ENST00000515752 C16orf71Q8IYS4 520 aaPredicted RBP18.86■□□□□ 0.61
SDHA-218ENST00000515752 LINS1Q8NG48 757 aa18.86■□□□□ 0.61
SDHA-218ENST00000515752 MAP3K2Q9Y2U5 619 aa18.86■□□□□ 0.61
SDHA-218ENST00000515752 PARP4Q9UKK3 1724 aaKnown RBP18.86■□□□□ 0.61
SDHA-218ENST00000515752 EVA1CP58658 441 aa18.86■□□□□ 0.61
SDHA-218ENST00000515752 APBB1O00213 710 aa18.85■□□□□ 0.61
SDHA-218ENST00000515752 SMARCA5O60264 1052 aaPredicted RBP18.85■□□□□ 0.61
SDHA-218ENST00000515752 SLC39A6Q13433 755 aa18.85■□□□□ 0.61
SDHA-218ENST00000515752 NKX1-1Q15270 411 aaPredicted RBP18.85■□□□□ 0.61
SDHA-218ENST00000515752 EXOC6BQ9Y2D4 811 aa18.85■□□□□ 0.61
SDHA-218ENST00000515752 ANXA1P04083 346 aa18.84■□□□□ 0.61
SDHA-218ENST00000515752 PDE1AP54750 535 aa18.84■□□□□ 0.61
SDHA-218ENST00000515752 MTX1Q13505 466 aa18.84■□□□□ 0.61
SDHA-218ENST00000515752 LARP1Q6PKG0 1096 aaKnown RBP18.84■□□□□ 0.61
SDHA-218ENST00000515752 ZNF496Q96IT1 587 aaPredicted RBP18.84■□□□□ 0.61
SDHA-218ENST00000515752 C9orf78Q9NZ63 289 aaPredicted RBP18.84■□□□□ 0.61
SDHA-218ENST00000515752 PDIA6Q15084 440 aa18.84■□□□□ 0.61
SDHA-218ENST00000515752 PROSER3Q2NL68 480 aa18.84■□□□□ 0.61
SDHA-218ENST00000515752 PPP1R42Q7Z4L9 355 aa18.84■□□□□ 0.61
SDHA-218ENST00000515752 AOX1Q06278 1338 aa18.83■□□□□ 0.6
SDHA-218ENST00000515752 NBPF7P0C2Y1 421 aaPredicted RBP18.83■□□□□ 0.6
SDHA-218ENST00000515752 NEXNQ0ZGT2 675 aa18.83■□□□□ 0.6
SDHA-218ENST00000515752 NBR1Q14596 966 aa18.83■□□□□ 0.6
SDHA-218ENST00000515752 ERBB4Q15303 1308 aa18.82■□□□□ 0.6
SDHA-218ENST00000515752 PRAMEF22A3QJZ6 481 aa18.82■□□□□ 0.6
SDHA-218ENST00000515752 STAP2Q9UGK3 403 aa18.82■□□□□ 0.6
SDHA-218ENST00000515752 ABCA3Q99758 1704 aa18.82■□□□□ 0.6
SDHA-218ENST00000515752 UTYO14607 1347 aa18.82■□□□□ 0.6
SDHA-218ENST00000515752 SRGAP3O43295 1099 aa18.81■□□□□ 0.6
SDHA-218ENST00000515752 SDSP20132 328 aa18.81■□□□□ 0.6
SDHA-218ENST00000515752 OTUD7AQ8TE49 926 aaPredicted RBP18.81■□□□□ 0.6
SDHA-218ENST00000515752 TBC1D2Q9BYX2 928 aa18.81■□□□□ 0.6
SDHA-218ENST00000515752 MX1P20591 662 aa18.81■□□□□ 0.6
SDHA-218ENST00000515752 RIC3Q7Z5B4 369 aa18.81■□□□□ 0.6
SDHA-218ENST00000515752 KIF1BPQ96EK5 621 aa18.81■□□□□ 0.6
SDHA-218ENST00000515752 SALL3Q9BXA9 1300 aa18.8■□□□□ 0.6
SDHA-218ENST00000515752 SURF6O75683 361 aaKnown RBP18.8■□□□□ 0.6
SDHA-218ENST00000515752 SNX21Q969T3 373 aa18.8■□□□□ 0.6
SDHA-218ENST00000515752 GRM8O00222 908 aa18.79■□□□□ 0.6
SDHA-218ENST00000515752 REC8O95072 547 aa18.79■□□□□ 0.6
SDHA-218ENST00000515752 HSCBQ8IWL3 235 aa18.79■□□□□ 0.6
SDHA-218ENST00000515752 AIMP1Q12904 312 aaKnown RBP18.78■□□□□ 0.6
SDHA-218ENST00000515752 ERC1Q8IUD2 1116 aa18.78■□□□□ 0.6
SDHA-218ENST00000515752 METTL22Q9BUU2 404 aaPredicted RBP18.78■□□□□ 0.6
SDHA-218ENST00000515752 STRN4Q9NRL3 753 aa18.78■□□□□ 0.6
SDHA-218ENST00000515752 ANKRD13DQ6ZTN6 518 aa18.77■□□□□ 0.6
SDHA-218ENST00000515752 COPS6Q7L5N1 327 aa18.77■□□□□ 0.59
SDHA-218ENST00000515752 RHPN1Q8TCX5 695 aa18.77■□□□□ 0.59
SDHA-218ENST00000515752 XAGE3Q8WTP9 111 aa18.77■□□□□ 0.59
SDHA-218ENST00000515752 BCL11AQ9H165 835 aa18.77■□□□□ 0.59
SDHA-218ENST00000515752 USP16Q9Y5T5 823 aa18.77■□□□□ 0.59
SDHA-218ENST00000515752 MYL6BP14649 208 aa18.76■□□□□ 0.59
SDHA-218ENST00000515752 CWF19L2Q2TBE0 894 aaKnown RBP18.75■□□□□ 0.59
SDHA-218ENST00000515752 LRP10Q7Z4F1 713 aa18.75■□□□□ 0.59
SDHA-218ENST00000515752 C5P01031 1676 aa18.74■□□□□ 0.59
SDHA-218ENST00000515752 ERC2O15083 957 aa18.74■□□□□ 0.59
SDHA-218ENST00000515752 AHDC1Q5TGY3 1603 aaPredicted RBP18.74■□□□□ 0.59
SDHA-218ENST00000515752 NEURL1BA8MQ27 555 aa18.73■□□□□ 0.59
SDHA-218ENST00000515752 DDX54Q8TDD1 881 aaKnown RBP18.73■□□□□ 0.59
SDHA-218ENST00000515752 USP26Q9BXU7 913 aa18.73■□□□□ 0.59
SDHA-218ENST00000515752 IGKV5-2P06315 115 aa18.72■□□□□ 0.59
SDHA-218ENST00000515752 OS9Q13438 667 aaPredicted RBP18.72■□□□□ 0.59
SDHA-218ENST00000515752 GCKRQ14397 625 aa18.72■□□□□ 0.59
SDHA-218ENST00000515752 PLBD2Q8NHP8 589 aa18.72■□□□□ 0.59
SDHA-218ENST00000515752 BTG4Q9NY30 223 aa18.72■□□□□ 0.59
SDHA-218ENST00000515752 EPB41L2O43491 1005 aaKnown RBP18.72■□□□□ 0.59
SDHA-218ENST00000515752 RABEP1Q15276 862 aa18.72■□□□□ 0.59
SDHA-218ENST00000515752 NFKBIBQ15653 356 aa18.72■□□□□ 0.59
SDHA-218ENST00000515752 CLASRPQ8N2M8 674 aaKnown RBP18.72■□□□□ 0.59
SDHA-218ENST00000515752 ANTXR1Q9H6X2 564 aa18.72■□□□□ 0.59
SDHA-218ENST00000515752 COL15A1P39059 1388 aa18.72■□□□□ 0.59
SDHA-218ENST00000515752 KIF2CQ99661 725 aa18.71■□□□□ 0.59
SDHA-218ENST00000515752 TEX13AQ9BXU3 409 aaPredicted RBP18.71■□□□□ 0.59
SDHA-218ENST00000515752 TTC41PQ6P2S7 1318 aa18.71■□□□□ 0.59
SDHA-218ENST00000515752 COL14A1Q05707 1796 aaKnown RBP18.71■□□□□ 0.59
SDHA-218ENST00000515752 LAMB4A4D0S4 1761 aa18.7■□□□□ 0.58
SDHA-218ENST00000515752 USP42Q9H9J4 1324 aaKnown RBP18.7■□□□□ 0.58
SDHA-218ENST00000515752 MYD88Q99836 296 aa18.7■□□□□ 0.58
SDHA-218ENST00000515752 IL1RAPL2Q9NP60 686 aa18.7■□□□□ 0.58
SDHA-218ENST00000515752 TNS2Q63HR2 1409 aa18.7■□□□□ 0.58
SDHA-218ENST00000515752 IL27Q8NEV9 243 aa18.7■□□□□ 0.58
SDHA-218ENST00000515752 GPATCH3Q96I76 525 aa18.7■□□□□ 0.58
SDHA-218ENST00000515752 SUCLG2Q96I99 432 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms