RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 TOGARAM1Q9Y4F4 1720 aa15.1■□□□□ 0.01
LMNA-224ENST00000515711 HDAC1Q13547 482 aaPredicted RBP15.1■□□□□ 0.01
LMNA-224ENST00000515711 ZCRB1Q8TBF4 217 aaKnown RBP15.1■□□□□ 0.01
LMNA-224ENST00000515711 CYP27B1O15528 508 aa15.09■□□□□ 0.01
LMNA-224ENST00000515711 LARP1Q6PKG0 1096 aaKnown RBP15.09■□□□□ 0.01
LMNA-224ENST00000515711 BTG4Q9NY30 223 aa15.09■□□□□ 0.01
LMNA-224ENST00000515711 CCT4P50991 539 aaKnown RBP15.08■□□□□ 0
LMNA-224ENST00000515711 PCDHB15Q9Y5E8 787 aa15.08■□□□□ 0
LMNA-224ENST00000515711 ZBTB7BO15156 539 aaPredicted RBP15.07■□□□□ 0
LMNA-224ENST00000515711 IGHDP01880 384 aa15.07■□□□□ 0
LMNA-224ENST00000515711 FLIIQ13045 1269 aa15.07■□□□□ 0
LMNA-224ENST00000515711 NKX1-1Q15270 411 aaPredicted RBP15.07■□□□□ 0
LMNA-224ENST00000515711 SPON1Q9HCB6 807 aa15.07■□□□□ 0
LMNA-224ENST00000515711 ITGB4P16144 1822 aa15.07■□□□□ 0
LMNA-224ENST00000515711 ERVV-2B6SEH9 535 aa15.06■□□□□ 0
LMNA-224ENST00000515711 TRIM37O94972 964 aa15.06■□□□□ 0
LMNA-224ENST00000515711 KCNQ2O43526 872 aa15.05■□□□□ -0
LMNA-224ENST00000515711 GIGYF1O75420 1035 aaPredicted RBP15.05■□□□□ -0
LMNA-224ENST00000515711 FKBP5Q13451 457 aaPredicted RBP15.05■□□□□ -0
LMNA-224ENST00000515711 ZNF790Q6PG37 636 aa15.05■□□□□ -0
LMNA-224ENST00000515711 TTC5Q8N0Z6 440 aa15.05■□□□□ -0
LMNA-224ENST00000515711 CDCA7Q9BWT1 371 aaPredicted RBP15.05■□□□□ -0
LMNA-224ENST00000515711 TNS2Q63HR2 1409 aa15.05■□□□□ -0
LMNA-224ENST00000515711 APBA3O96018 575 aa15.04■□□□□ -0
LMNA-224ENST00000515711 CABP4P57796 275 aa15.04■□□□□ -0
LMNA-224ENST00000515711 DBF4Q9UBU7 674 aaPredicted RBP15.04■□□□□ -0
LMNA-224ENST00000515711 THRAP3Q9Y2W1 955 aaKnown RBP15.04■□□□□ -0
LMNA-224ENST00000515711 UTRNP46939 3433 aa15.04■□□□□ -0
LMNA-224ENST00000515711 KCNQ3O43525 872 aa15.03■□□□□ -0
LMNA-224ENST00000515711 G2E3Q7L622 706 aa15.03■□□□□ -0
LMNA-224ENST00000515711 DOT1LQ8TEK3 1739 aa15.03■□□□□ -0
LMNA-224ENST00000515711 ATP10DQ9P241 1426 aa15.02■□□□□ -0
LMNA-224ENST00000515711 NFATC2IPQ8NCF5 419 aa15.02■□□□□ -0
LMNA-224ENST00000515711 FMNL2Q96PY5 1086 aa15.02■□□□□ -0
LMNA-224ENST00000515711 KCPQ6ZWJ8 1503 aa15.02□□□□□ -0.01
LMNA-224ENST00000515711 NUP188Q5SRE5 1749 aa15.01□□□□□ -0.01
LMNA-224ENST00000515711 RREB1Q92766 1687 aa15.01□□□□□ -0.01
LMNA-224ENST00000515711 EIF2S2P20042 333 aaKnown RBP15.01□□□□□ -0.01
LMNA-224ENST00000515711 SMC5Q8IY18 1101 aa15.01□□□□□ -0.01
LMNA-224ENST00000515711 GCC1Q96CN9 775 aa15.01□□□□□ -0.01
LMNA-224ENST00000515711 HYPKQ9NX55 129 aa15.01□□□□□ -0.01
LMNA-224ENST00000515711 CHPF2Q9P2E5 772 aa15.01□□□□□ -0.01
LMNA-224ENST00000515711 CEP350Q5VT06 3117 aa15□□□□□ -0.01
LMNA-224ENST00000515711 ERBB4Q15303 1308 aa15□□□□□ -0.01
LMNA-224ENST00000515711 GNAI3P08754 354 aa15□□□□□ -0.01
LMNA-224ENST00000515711 NBPF14Q5TI25 921 aa15□□□□□ -0.01
LMNA-224ENST00000515711 NECTIN2Q92692 538 aa15□□□□□ -0.01
LMNA-224ENST00000515711 IBTKQ9P2D0 1353 aaPredicted RBP14.99□□□□□ -0.01
LMNA-224ENST00000515711 ARFGEF2Q9Y6D5 1785 aa14.99□□□□□ -0.01
LMNA-224ENST00000515711 SNRPA1P09661 255 aaKnown RBP14.99□□□□□ -0.01
LMNA-224ENST00000515711 SLC4A10Q6U841 1118 aa14.99□□□□□ -0.01
LMNA-224ENST00000515711 RPAP2Q8IXW5 612 aaPredicted RBP14.99□□□□□ -0.01
LMNA-224ENST00000515711 DDX21Q9NR30 783 aaKnown RBP eCLIP14.99□□□□□ -0.01
LMNA-224ENST00000515711 SPATA31A1Q5TZJ5 1347 aa14.98□□□□□ -0.01
LMNA-224ENST00000515711 THSD7AQ9UPZ6 1657 aa14.98□□□□□ -0.01
LMNA-224ENST00000515711 DDX58O95786 925 aaKnown RBP14.98□□□□□ -0.01
LMNA-224ENST00000515711 SLC39A6Q13433 755 aa14.98□□□□□ -0.01
LMNA-224ENST00000515711 USP35Q9P2H5 1018 aa14.98□□□□□ -0.01
LMNA-224ENST00000515711 RBM19Q9Y4C8 960 aaKnown RBP14.98□□□□□ -0.01
LMNA-224ENST00000515711 AFDNP55196 1824 aaKnown RBP14.98□□□□□ -0.01
LMNA-224ENST00000515711 F6X3S4 739 aa14.97□□□□□ -0.01
LMNA-224ENST00000515711 ANKRD44Q8N8A2 993 aa14.97□□□□□ -0.01
LMNA-224ENST00000515711 DDX54Q8TDD1 881 aaKnown RBP14.97□□□□□ -0.01
LMNA-224ENST00000515711 ZNF496Q96IT1 587 aaPredicted RBP14.97□□□□□ -0.01
LMNA-224ENST00000515711 PDZRN3Q9UPQ7 1066 aa14.97□□□□□ -0.01
LMNA-224ENST00000515711 SPATA31A5Q5VU36 1347 aa14.96□□□□□ -0.01
LMNA-224ENST00000515711 SPATA31A7Q8IWB4 1347 aa14.96□□□□□ -0.01
LMNA-224ENST00000515711 CICQ96RK0 1608 aaPredicted RBP14.96□□□□□ -0.01
LMNA-224ENST00000515711 HMMRO75330 724 aa14.96□□□□□ -0.01
LMNA-224ENST00000515711 RGS3P49796 1198 aa14.96□□□□□ -0.01
LMNA-224ENST00000515711 DNAAF4Q8WXU2 420 aa14.96□□□□□ -0.01
LMNA-224ENST00000515711 SRCIN1Q9C0H9 1055 aa14.96□□□□□ -0.01
LMNA-224ENST00000515711 PHAXQ9H814 394 aaKnown RBP14.96□□□□□ -0.01
LMNA-224ENST00000515711 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
LMNA-224ENST00000515711 ADCY9O60503 1353 aa14.96□□□□□ -0.02
LMNA-224ENST00000515711 EXOC5O00471 708 aa14.95□□□□□ -0.02
LMNA-224ENST00000515711 GNAI2P04899 355 aa14.95□□□□□ -0.02
LMNA-224ENST00000515711 FAM196AQ6ZSG2 479 aa14.95□□□□□ -0.02
LMNA-224ENST00000515711 BARGINQ6ZT62 677 aa14.95□□□□□ -0.02
LMNA-224ENST00000515711 MEIS3Q99687 375 aa14.95□□□□□ -0.02
LMNA-224ENST00000515711 C1orf115Q9H7X2 142 aa14.95□□□□□ -0.02
LMNA-224ENST00000515711 HDAC5Q9UQL6 1122 aa14.95□□□□□ -0.02
LMNA-224ENST00000515711 ALDH1L1O75891 902 aa14.94□□□□□ -0.02
LMNA-224ENST00000515711 FAM161AQ3B820 660 aa14.94□□□□□ -0.02
LMNA-224ENST00000515711 CEP85Q6P2H3 762 aa14.94□□□□□ -0.02
LMNA-224ENST00000515711 KSR2Q6VAB6 950 aa14.94□□□□□ -0.02
LMNA-224ENST00000515711 PDE4AP27815 886 aa14.93□□□□□ -0.02
LMNA-224ENST00000515711 NUCB1Q02818 461 aa14.93□□□□□ -0.02
LMNA-224ENST00000515711 BACH2Q9BYV9 841 aa14.93□□□□□ -0.02
LMNA-224ENST00000515711 BCL9O00512 1426 aa14.92□□□□□ -0.02
LMNA-224ENST00000515711 PI4KAP2A4QPH2 592 aa14.92□□□□□ -0.02
LMNA-224ENST00000515711 UBTFL1P0CB47 393 aaPredicted RBP14.92□□□□□ -0.02
LMNA-224ENST00000515711 PI4KAP1Q8N8J0 262 aa14.92□□□□□ -0.02
LMNA-224ENST00000515711 TEX13AQ9BXU3 409 aaPredicted RBP14.92□□□□□ -0.02
LMNA-224ENST00000515711 PDGFDQ9GZP0 370 aaPredicted RBP14.92□□□□□ -0.02
LMNA-224ENST00000515711 ZNF831Q5JPB2 1677 aa14.92□□□□□ -0.02
LMNA-224ENST00000515711 TJP1Q07157 1748 aa14.92□□□□□ -0.02
LMNA-224ENST00000515711 PRAMEF22A3QJZ6 481 aa14.91□□□□□ -0.02
LMNA-224ENST00000515711 ZBTB7AO95365 584 aa14.91□□□□□ -0.02
LMNA-224ENST00000515711 PDIA6Q15084 440 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms