RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 SIPA1L3O60292 1781 aaPredicted RBP24.91■■□□□ 1.58
SPOP-220ENST00000515508 ZPR1O75312 459 aa24.91■■□□□ 1.58
SPOP-220ENST00000515508 DALRD3Q5D0E6 543 aaKnown RBP24.91■■□□□ 1.58
SPOP-220ENST00000515508 CC2D1BQ5T0F9 858 aaKnown RBP24.91■■□□□ 1.58
SPOP-220ENST00000515508 USPL1Q5W0Q7 1092 aa24.91■■□□□ 1.58
SPOP-220ENST00000515508 VSIG10Q8N0Z9 540 aa24.91■■□□□ 1.58
SPOP-220ENST00000515508 ZBTB1Q9Y2K1 713 aa24.9■■□□□ 1.58
SPOP-220ENST00000515508 NARFQ9UHQ1 456 aa24.89■■□□□ 1.58
SPOP-220ENST00000515508 SBF1O95248 1867 aa24.89■■□□□ 1.57
SPOP-220ENST00000515508 TOMM70O94826 608 aa24.88■■□□□ 1.57
SPOP-220ENST00000515508 CHRNA5P30532 468 aa24.88■■□□□ 1.57
SPOP-220ENST00000515508 C9orf131Q5VYM1 1079 aa24.88■■□□□ 1.57
SPOP-220ENST00000515508 NFIXQ14938 502 aa24.86■■□□□ 1.57
SPOP-220ENST00000515508 NMRK2Q9NPI5 230 aa24.86■■□□□ 1.57
SPOP-220ENST00000515508 SCN7AQ01118 1682 aa24.85■■□□□ 1.57
SPOP-220ENST00000515508 BCL2L12Q9HB09 334 aa24.85■■□□□ 1.57
SPOP-220ENST00000515508 TNRC6CQ9HCJ0 1690 aaKnown RBP24.85■■□□□ 1.57
SPOP-220ENST00000515508 APLP1P51693 650 aa24.82■■□□□ 1.56
SPOP-220ENST00000515508 TTC5Q8N0Z6 440 aa24.82■■□□□ 1.56
SPOP-220ENST00000515508 IFFO2Q5TF58 517 aa24.81■■□□□ 1.56
SPOP-220ENST00000515508 RNF181Q9P0P0 153 aa24.81■■□□□ 1.56
SPOP-220ENST00000515508 WDR90Q96KV7 1748 aa24.81■■□□□ 1.56
SPOP-220ENST00000515508 EIF5P55010 431 aaKnown RBP24.8■■□□□ 1.56
SPOP-220ENST00000515508 GAS2L2Q8NHY3 880 aa24.8■■□□□ 1.56
SPOP-220ENST00000515508 HEG1Q9ULI3 1381 aa24.8■■□□□ 1.56
SPOP-220ENST00000515508 GNAT3A8MTJ3 354 aa24.79■■□□□ 1.56
SPOP-220ENST00000515508 U2SURPO15042 1029 aaKnown RBP24.79■■□□□ 1.56
SPOP-220ENST00000515508 STARD3NLO95772 234 aa24.79■■□□□ 1.56
SPOP-220ENST00000515508 SERPINB2P05120 415 aa24.79■■□□□ 1.56
SPOP-220ENST00000515508 IL17REQ8NFR9 667 aa24.79■■□□□ 1.56
SPOP-220ENST00000515508 RBM46Q8TBY0 533 aaKnown RBP24.79■■□□□ 1.56
SPOP-220ENST00000515508 KDM2BQ8NHM5 1336 aa24.79■■□□□ 1.56
SPOP-220ENST00000515508 ANKRD31Q8N7Z5 1873 aa24.79■■□□□ 1.56
SPOP-220ENST00000515508 CARMIL3Q8ND23 1372 aa24.79■■□□□ 1.56
SPOP-220ENST00000515508 CEMIPQ8WUJ3 1361 aa24.79■■□□□ 1.56
SPOP-220ENST00000515508 CANXP27824 592 aaKnown RBP24.78■■□□□ 1.56
SPOP-220ENST00000515508 TEFQ10587 303 aa24.78■■□□□ 1.56
SPOP-220ENST00000515508 ZNF790Q6PG37 636 aa24.78■■□□□ 1.56
SPOP-220ENST00000515508 ZNF496Q96IT1 587 aaPredicted RBP24.78■■□□□ 1.56
SPOP-220ENST00000515508 ZC3H4Q9UPT8 1303 aaKnown RBP24.77■■□□□ 1.56
SPOP-220ENST00000515508 TIAM2Q8IVF5 1701 aa24.76■■□□□ 1.55
SPOP-220ENST00000515508 A0A087WZG4 1122 aa24.76■■□□□ 1.55
SPOP-220ENST00000515508 TEX13AQ9BXU3 409 aaPredicted RBP24.75■■□□□ 1.55
SPOP-220ENST00000515508 COL11A2P13942 1736 aaPredicted RBP24.75■■□□□ 1.55
SPOP-220ENST00000515508 BCORQ6W2J9 1755 aa24.75■■□□□ 1.55
SPOP-220ENST00000515508 RASSF7Q02833 373 aa24.74■■□□□ 1.55
SPOP-220ENST00000515508 DNAJC5GQ8N7S2 189 aa24.74■■□□□ 1.55
SPOP-220ENST00000515508 C16orf71Q8IYS4 520 aaPredicted RBP24.73■■□□□ 1.55
SPOP-220ENST00000515508 TTLL6Q8N841 843 aa24.73■■□□□ 1.55
SPOP-220ENST00000515508 IL6STP40189 918 aaPredicted RBP24.72■■□□□ 1.55
SPOP-220ENST00000515508 FSTL1Q12841 308 aa24.72■■□□□ 1.55
SPOP-220ENST00000515508 RSPH6AQ9H0K4 717 aa24.72■■□□□ 1.55
SPOP-220ENST00000515508 CCDC88AQ3V6T2 1871 aa24.72■■□□□ 1.55
SPOP-220ENST00000515508 LMNB1P20700 586 aa24.71■■□□□ 1.55
SPOP-220ENST00000515508 CNGB1Q14028 1251 aaPredicted RBP24.71■■□□□ 1.55
SPOP-220ENST00000515508 TBC1D9BQ66K14 1250 aa24.71■■□□□ 1.55
SPOP-220ENST00000515508 BICDL1Q6ZP65 573 aa24.71■■□□□ 1.55
SPOP-220ENST00000515508 C2CD5Q86YS7 1000 aa24.71■■□□□ 1.55
SPOP-220ENST00000515508 FMNL2Q96PY5 1086 aa24.71■■□□□ 1.55
SPOP-220ENST00000515508 H0YIN7 160 aa24.7■■□□□ 1.54
SPOP-220ENST00000515508 PRELPP51888 382 aa24.7■■□□□ 1.54
SPOP-220ENST00000515508 PHACTR3Q96KR7 559 aa24.7■■□□□ 1.54
SPOP-220ENST00000515508 PRKAR2BP31323 418 aa24.69■■□□□ 1.54
SPOP-220ENST00000515508 RRAGCQ9HB90 399 aa24.69■■□□□ 1.54
SPOP-220ENST00000515508 FER1L6Q2WGJ9 1857 aa24.68■■□□□ 1.54
SPOP-220ENST00000515508 CFAP53Q96M91 514 aa24.68■■□□□ 1.54
SPOP-220ENST00000515508 PDZRN3Q9UPQ7 1066 aa24.68■■□□□ 1.54
SPOP-220ENST00000515508 NFKBIEO00221 500 aa24.67■■□□□ 1.54
SPOP-220ENST00000515508 TBC1D2BQ9UPU7 963 aa24.67■■□□□ 1.54
SPOP-220ENST00000515508 ARFGEF2Q9Y6D5 1785 aa24.67■■□□□ 1.54
SPOP-220ENST00000515508 BTBD11A6QL63 1104 aa24.66■■□□□ 1.54
SPOP-220ENST00000515508 PRR5LQ6MZQ0 368 aa24.66■■□□□ 1.54
SPOP-220ENST00000515508 BRIP1Q9BX63 1249 aa24.66■■□□□ 1.54
SPOP-220ENST00000515508 ZNF330Q9Y3S2 320 aaPredicted RBP24.66■■□□□ 1.54
SPOP-220ENST00000515508 DICER1Q9UPY3 1922 aaKnown RBP24.66■■□□□ 1.54
SPOP-220ENST00000515508 A1BGP04217 495 aa24.65■■□□□ 1.54
SPOP-220ENST00000515508 PDE6BP35913 854 aa24.65■■□□□ 1.54
SPOP-220ENST00000515508 GLTPD2A6NH11 291 aa24.64■■□□□ 1.54
SPOP-220ENST00000515508 KCNQ3O43525 872 aa24.64■■□□□ 1.54
SPOP-220ENST00000515508 CAMTA2O94983 1202 aa24.64■■□□□ 1.54
SPOP-220ENST00000515508 NUDCQ9Y266 331 aa24.63■■□□□ 1.53
SPOP-220ENST00000515508 CACNA1SQ13698 1873 aa24.63■■□□□ 1.53
SPOP-220ENST00000515508 SMC1BQ8NDV3 1235 aa24.62■■□□□ 1.53
SPOP-220ENST00000515508 NPM2Q86SE8 214 aaKnown RBP24.61■■□□□ 1.53
SPOP-220ENST00000515508 CNBD1Q8NA66 436 aa24.61■■□□□ 1.53
SPOP-220ENST00000515508 KLRG1Q96E93 195 aa24.61■■□□□ 1.53
SPOP-220ENST00000515508 SETDB2Q96T68 719 aa24.61■■□□□ 1.53
SPOP-220ENST00000515508 PPP2R1AP30153 589 aa24.6■■□□□ 1.53
SPOP-220ENST00000515508 HTRA3P83110 453 aa24.6■■□□□ 1.53
SPOP-220ENST00000515508 DZIP3Q86Y13 1208 aaKnown RBP24.6■■□□□ 1.53
SPOP-220ENST00000515508 ZNF622Q969S3 477 aaKnown RBP eCLIP24.6■■□□□ 1.537e-6■■□□□ 12.8
SPOP-220ENST00000515508 USP16Q9Y5T5 823 aa24.6■■□□□ 1.53
SPOP-220ENST00000515508 SLX4Q8IY92 1834 aa24.59■■□□□ 1.53
SPOP-220ENST00000515508 U2AF1L5P0DN76 240 aaPredicted RBP24.59■■□□□ 1.53
SPOP-220ENST00000515508 VEGFAP15692 232 aaPredicted RBP24.59■■□□□ 1.53
SPOP-220ENST00000515508 U2AF1Q01081 240 aaKnown RBP eCLIP24.59■■□□□ 1.53
SPOP-220ENST00000515508 CCDC24Q8N4L8 307 aa24.59■■□□□ 1.53
SPOP-220ENST00000515508 LAMB4A4D0S4 1761 aa24.59■■□□□ 1.53
SPOP-220ENST00000515508 C21orf2O43822 256 aa24.58■■□□□ 1.53
SPOP-220ENST00000515508 JMYQ8N9B5 988 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms