RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
ITGA3-214ENST00000514834 CANXP27824 592 aaKnown RBP18.44■□□□□ 0.54
ITGA3-214ENST00000514834 THUMPD2Q9BTF0 503 aaKnown RBP18.44■□□□□ 0.54
ITGA3-214ENST00000514834 MIS18AQ9NYP9 233 aa18.44■□□□□ 0.54
ITGA3-214ENST00000514834 HTATSF1O43719 755 aaKnown RBP18.42■□□□□ 0.54
ITGA3-214ENST00000514834 DDR1Q08345 913 aa18.42■□□□□ 0.54
ITGA3-214ENST00000514834 NFE2L2Q16236 605 aa18.42■□□□□ 0.54
ITGA3-214ENST00000514834 USPL1Q5W0Q7 1092 aa18.42■□□□□ 0.54
ITGA3-214ENST00000514834 FMNL2Q96PY5 1086 aa18.42■□□□□ 0.54
ITGA3-214ENST00000514834 KIAA1551Q9HCM1 1747 aa18.41■□□□□ 0.54
ITGA3-214ENST00000514834 A1BGP04217 495 aa18.41■□□□□ 0.54
ITGA3-214ENST00000514834 PRKRIP1Q9H875 184 aaPredicted RBP18.41■□□□□ 0.54
ITGA3-214ENST00000514834 BCL2L12Q9HB09 334 aa18.41■□□□□ 0.54
ITGA3-214ENST00000514834 USP16Q9Y5T5 823 aa18.41■□□□□ 0.54
ITGA3-214ENST00000514834 COL15A1P39059 1388 aa18.41■□□□□ 0.54
ITGA3-214ENST00000514834 CHD4Q14839 1912 aa18.41■□□□□ 0.54
ITGA3-214ENST00000514834 KIF13BQ9NQT8 1826 aa18.4■□□□□ 0.54
ITGA3-214ENST00000514834 STARD3NLO95772 234 aa18.4■□□□□ 0.54
ITGA3-214ENST00000514834 N4BP2Q86UW6 1770 aaPredicted RBP18.4■□□□□ 0.54
ITGA3-214ENST00000514834 TM4SF1P30408 202 aa18.39■□□□□ 0.53
ITGA3-214ENST00000514834 PIP4K2AP48426 406 aaPredicted RBP18.39■□□□□ 0.53
ITGA3-214ENST00000514834 EIF5P55010 431 aaKnown RBP18.39■□□□□ 0.53
ITGA3-214ENST00000514834 TAF7Q15545 349 aaPredicted RBP18.39■□□□□ 0.53
ITGA3-214ENST00000514834 NARFQ9UHQ1 456 aa18.39■□□□□ 0.53
ITGA3-214ENST00000514834 ZPR1O75312 459 aa18.38■□□□□ 0.53
ITGA3-214ENST00000514834 NEFMP07197 916 aa18.38■□□□□ 0.53
ITGA3-214ENST00000514834 CCDC146Q8IYE0 955 aa18.38■□□□□ 0.53
ITGA3-214ENST00000514834 PARP3Q9Y6F1 533 aa18.38■□□□□ 0.53
ITGA3-214ENST00000514834 C10orf71Q711Q0 1435 aa18.38■□□□□ 0.53
ITGA3-214ENST00000514834 A0A0G2JLW4 131 aa18.37■□□□□ 0.53
ITGA3-214ENST00000514834 TEX13AQ9BXU3 409 aaPredicted RBP18.37■□□□□ 0.53
ITGA3-214ENST00000514834 MAPK8IP3Q9UPT6 1336 aa18.37■□□□□ 0.53
ITGA3-214ENST00000514834 PXDNLA1KZ92 1463 aa18.37■□□□□ 0.53
ITGA3-214ENST00000514834 POLRMTO00411 1230 aaKnown RBP18.36■□□□□ 0.53
ITGA3-214ENST00000514834 NFIXQ14938 502 aa18.36■□□□□ 0.53
ITGA3-214ENST00000514834 ADAMTS8Q9UP79 889 aa18.36■□□□□ 0.53
ITGA3-214ENST00000514834 TBC1D2BQ9UPU7 963 aa18.36■□□□□ 0.53
ITGA3-214ENST00000514834 RRP7AQ9Y3A4 280 aaKnown RBP18.36■□□□□ 0.53
ITGA3-214ENST00000514834 ZNF330Q9Y3S2 320 aaPredicted RBP18.36■□□□□ 0.53
ITGA3-214ENST00000514834 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
ITGA3-214ENST00000514834 RIPK4P57078 832 aa18.35■□□□□ 0.53
ITGA3-214ENST00000514834 PNNQ9H307 717 aaKnown RBP18.35■□□□□ 0.53
ITGA3-214ENST00000514834 AFDNP55196 1824 aaKnown RBP18.35■□□□□ 0.53
ITGA3-214ENST00000514834 SNRPA1P09661 255 aaKnown RBP18.34■□□□□ 0.53
ITGA3-214ENST00000514834 DPEP1P16444 411 aa18.34■□□□□ 0.53
ITGA3-214ENST00000514834 TMPOP42166 694 aaKnown RBP18.34■□□□□ 0.53
ITGA3-214ENST00000514834 NBPF26B4DH59 902 aa18.33■□□□□ 0.52
ITGA3-214ENST00000514834 KCNA3P22001 575 aa18.33■□□□□ 0.52
ITGA3-214ENST00000514834 IL6STP40189 918 aaPredicted RBP18.33■□□□□ 0.52
ITGA3-214ENST00000514834 CCDC184Q52MB2 194 aa18.33■□□□□ 0.52
ITGA3-214ENST00000514834 NBPF10Q6P3W6 841 aaKnown RBP18.33■□□□□ 0.52
ITGA3-214ENST00000514834 NBPF15Q8N660 670 aa18.33■□□□□ 0.52
ITGA3-214ENST00000514834 GRIN3BO60391 1043 aa18.32■□□□□ 0.52
ITGA3-214ENST00000514834 TGFB2P61812 414 aa18.32■□□□□ 0.52
ITGA3-214ENST00000514834 BICDL1Q6ZP65 573 aa18.32■□□□□ 0.52
ITGA3-214ENST00000514834 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
ITGA3-214ENST00000514834 WDR43Q15061 677 aaKnown RBP eCLIP18.31■□□□□ 0.52
ITGA3-214ENST00000514834 NEUROD2Q15784 382 aa18.31■□□□□ 0.52
ITGA3-214ENST00000514834 TBC1D9BQ66K14 1250 aa18.31■□□□□ 0.52
ITGA3-214ENST00000514834 ZNF784Q8NCA9 323 aaPredicted RBP18.31■□□□□ 0.52
ITGA3-214ENST00000514834 SCN7AQ01118 1682 aa18.31■□□□□ 0.52
ITGA3-214ENST00000514834 BRCA1P38398 1863 aaKnown RBP18.31■□□□□ 0.52
ITGA3-214ENST00000514834 NRXN2Q9P2S2 1712 aa18.3■□□□□ 0.52
ITGA3-214ENST00000514834 A0A087WZG4 1122 aa18.3■□□□□ 0.52
ITGA3-214ENST00000514834 CAMTA2O94983 1202 aa18.3■□□□□ 0.52
ITGA3-214ENST00000514834 CHRNA5P30532 468 aa18.3■□□□□ 0.52
ITGA3-214ENST00000514834 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
ITGA3-214ENST00000514834 SERPINB2P05120 415 aa18.29■□□□□ 0.52
ITGA3-214ENST00000514834 RUNDC1Q96C34 613 aa18.29■□□□□ 0.52
ITGA3-214ENST00000514834 TRIM35Q9UPQ4 493 aa18.29■□□□□ 0.52
ITGA3-214ENST00000514834 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
ITGA3-214ENST00000514834 PNISRQ8TF01 805 aaKnown RBP18.28■□□□□ 0.52
ITGA3-214ENST00000514834 CARMIL3Q8ND23 1372 aa18.28■□□□□ 0.52
ITGA3-214ENST00000514834 LAMB4A4D0S4 1761 aa18.27■□□□□ 0.52
ITGA3-214ENST00000514834 BCORQ6W2J9 1755 aa18.27■□□□□ 0.52
ITGA3-214ENST00000514834 CCDC24Q8N4L8 307 aa18.27■□□□□ 0.52
ITGA3-214ENST00000514834 BCS1LQ9Y276 419 aa18.27■□□□□ 0.52
ITGA3-214ENST00000514834 TSPYL4Q9UJ04 414 aa18.26■□□□□ 0.51
ITGA3-214ENST00000514834 NGEFQ8N5V2 710 aa18.24■□□□□ 0.51
ITGA3-214ENST00000514834 ANKRD31Q8N7Z5 1873 aa18.24■□□□□ 0.51
ITGA3-214ENST00000514834 KRT24Q2M2I5 525 aa18.23■□□□□ 0.51
ITGA3-214ENST00000514834 PIM2Q9P1W9 311 aa18.23■□□□□ 0.51
ITGA3-214ENST00000514834 SENP3-EIF4A1A0A087X0R7 540 aa18.22■□□□□ 0.51
ITGA3-214ENST00000514834 APAF1O14727 1248 aa18.22■□□□□ 0.51
ITGA3-214ENST00000514834 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
ITGA3-214ENST00000514834 HLFQ16534 295 aa18.22■□□□□ 0.51
ITGA3-214ENST00000514834 PRR5LQ6MZQ0 368 aa18.22■□□□□ 0.51
ITGA3-214ENST00000514834 NPM2Q86SE8 214 aaKnown RBP18.22■□□□□ 0.51
ITGA3-214ENST00000514834 ARFGEF1Q9Y6D6 1849 aa18.21■□□□□ 0.51
ITGA3-214ENST00000514834 CHL1O00533 1208 aa18.21■□□□□ 0.51
ITGA3-214ENST00000514834 MYL6BP14649 208 aa18.21■□□□□ 0.51
ITGA3-214ENST00000514834 TTLL7Q6ZT98 887 aa18.21■□□□□ 0.51
ITGA3-214ENST00000514834 ARHGAP27Q6ZUM4 889 aa18.21■□□□□ 0.51
ITGA3-214ENST00000514834 SETDB2Q96T68 719 aa18.21■□□□□ 0.51
ITGA3-214ENST00000514834 LAS1LQ9Y4W2 734 aaKnown RBP18.21■□□□□ 0.51
ITGA3-214ENST00000514834 DALRD3Q5D0E6 543 aaKnown RBP18.2■□□□□ 0.5
ITGA3-214ENST00000514834 ANP32CO43423 234 aa18.19■□□□□ 0.5
ITGA3-214ENST00000514834 ANXA1P04083 346 aa18.19■□□□□ 0.5
ITGA3-214ENST00000514834 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
ITGA3-214ENST00000514834 PDIA6Q15084 440 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms