RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 CCNL1Q9UK58 526 aaPredicted RBP21.58■■□□□ 1.05
SNCAIP-220ENST00000514497 WWC3Q9ULE0 1092 aa21.58■■□□□ 1.05
SNCAIP-220ENST00000514497 SLC52A2Q9HAB3 445 aa21.57■■□□□ 1.04
SNCAIP-220ENST00000514497 PRIM1P49642 420 aaKnown RBP21.56■■□□□ 1.04
SNCAIP-220ENST00000514497 ITGB4P16144 1822 aa21.55■■□□□ 1.04
SNCAIP-220ENST00000514497 DUSP27Q5VZP5 1158 aa21.55■■□□□ 1.04
SNCAIP-220ENST00000514497 CDCA7LQ96GN5 454 aa21.55■■□□□ 1.04
SNCAIP-220ENST00000514497 THUMPD2Q9BTF0 503 aaKnown RBP21.55■■□□□ 1.04
SNCAIP-220ENST00000514497 KDM3BQ7LBC6 1761 aa21.53■■□□□ 1.04
SNCAIP-220ENST00000514497 TOGARAM1Q9Y4F4 1720 aa21.53■■□□□ 1.04
SNCAIP-220ENST00000514497 CABP4P57796 275 aa21.53■■□□□ 1.04
SNCAIP-220ENST00000514497 KLRG1Q96E93 195 aa21.53■■□□□ 1.04
SNCAIP-220ENST00000514497 SPINK5Q9NQ38 1064 aaPredicted RBP21.53■■□□□ 1.04
SNCAIP-220ENST00000514497 CT47B1P0C2W7 299 aaPredicted RBP21.52■■□□□ 1.04
SNCAIP-220ENST00000514497 C5P01031 1676 aa21.52■■□□□ 1.04
SNCAIP-220ENST00000514497 BTBD11A6QL63 1104 aa21.51■■□□□ 1.03
SNCAIP-220ENST00000514497 JMYQ8N9B5 988 aa21.51■■□□□ 1.03
SNCAIP-220ENST00000514497 NFATC2IPQ8NCF5 419 aa21.51■■□□□ 1.03
SNCAIP-220ENST00000514497 TSPYL4Q9UJ04 414 aa21.51■■□□□ 1.03
SNCAIP-220ENST00000514497 LAS1LQ9Y4W2 734 aaKnown RBP21.51■■□□□ 1.03
SNCAIP-220ENST00000514497 SOS1Q07889 1333 aaPredicted RBP21.51■■□□□ 1.03
SNCAIP-220ENST00000514497 FANCIQ9NVI1 1328 aa21.51■■□□□ 1.03
SNCAIP-220ENST00000514497 MBIPQ9NS73 344 aa21.5■■□□□ 1.03
SNCAIP-220ENST00000514497 HTRA3P83110 453 aa21.49■■□□□ 1.03
SNCAIP-220ENST00000514497 ZNF428Q96B54 188 aa21.49■■□□□ 1.03
SNCAIP-220ENST00000514497 CHMP4AQ9BY43 222 aa21.49■■□□□ 1.03
SNCAIP-220ENST00000514497 TMOD3Q9NYL9 352 aa21.49■■□□□ 1.03
SNCAIP-220ENST00000514497 CICQ96RK0 1608 aaPredicted RBP21.48■■□□□ 1.03
SNCAIP-220ENST00000514497 PCNTO95613 3336 aa21.48■■□□□ 1.03
SNCAIP-220ENST00000514497 FLAD1Q8NFF5 587 aa21.48■■□□□ 1.03
SNCAIP-220ENST00000514497 TAF1LQ8IZX4 1826 aa21.47■■□□□ 1.03
SNCAIP-220ENST00000514497 ZNF790Q6PG37 636 aa21.46■■□□□ 1.03
SNCAIP-220ENST00000514497 TSR2Q969E8 191 aaKnown RBP21.46■■□□□ 1.03
SNCAIP-220ENST00000514497 NMRK2Q9NPI5 230 aa21.45■■□□□ 1.02
SNCAIP-220ENST00000514497 UBR2Q8IWV8 1755 aa21.45■■□□□ 1.02
SNCAIP-220ENST00000514497 HOXB7P09629 217 aa21.44■■□□□ 1.02
SNCAIP-220ENST00000514497 TTC5Q8N0Z6 440 aa21.44■■□□□ 1.02
SNCAIP-220ENST00000514497 RBM46Q8TBY0 533 aaKnown RBP21.44■■□□□ 1.02
SNCAIP-220ENST00000514497 CACNA1FO60840 1977 aa21.43■■□□□ 1.02
SNCAIP-220ENST00000514497 EXOSC9Q06265 439 aaKnown RBP21.42■■□□□ 1.02
SNCAIP-220ENST00000514497 PIGBQ92521 554 aa21.42■■□□□ 1.02
SNCAIP-220ENST00000514497 MIS18AQ9NYP9 233 aa21.42■■□□□ 1.02
SNCAIP-220ENST00000514497 HEG1Q9ULI3 1381 aa21.41■■□□□ 1.02
SNCAIP-220ENST00000514497 EIF4A1P60842 406 aaKnown RBP21.41■■□□□ 1.02
SNCAIP-220ENST00000514497 C16orf71Q8IYS4 520 aaPredicted RBP21.41■■□□□ 1.02
SNCAIP-220ENST00000514497 HMGB2P26583 209 aaKnown RBP21.4■■□□□ 1.02
SNCAIP-220ENST00000514497 SMARCC1Q92922 1105 aaPredicted RBP21.4■■□□□ 1.02
SNCAIP-220ENST00000514497 FMNL2Q96PY5 1086 aa21.4■■□□□ 1.02
SNCAIP-220ENST00000514497 TWISTNBQ3B726 338 aaPredicted RBP21.39■■□□□ 1.01
SNCAIP-220ENST00000514497 C4BP0C0L5 1744 aa21.38■■□□□ 1.01
SNCAIP-220ENST00000514497 ZNF831Q5JPB2 1677 aa21.38■■□□□ 1.01
SNCAIP-220ENST00000514497 FSTL1Q12841 308 aa21.38■■□□□ 1.01
SNCAIP-220ENST00000514497 VSIG10Q8N0Z9 540 aa21.38■■□□□ 1.01
SNCAIP-220ENST00000514497 UBR3Q6ZT12 1888 aa21.38■■□□□ 1.01
SNCAIP-220ENST00000514497 VAMP4O75379 141 aa21.37■■□□□ 1.01
SNCAIP-220ENST00000514497 SLC34A2O95436 690 aa21.37■■□□□ 1.01
SNCAIP-220ENST00000514497 C8orf58Q8NAV2 365 aa21.37■■□□□ 1.01
SNCAIP-220ENST00000514497 N4BP2Q86UW6 1770 aaPredicted RBP21.36■■□□□ 1.01
SNCAIP-220ENST00000514497 PHF14O94880 888 aa21.36■■□□□ 1.01
SNCAIP-220ENST00000514497 SLC39A6Q13433 755 aa21.36■■□□□ 1.01
SNCAIP-220ENST00000514497 ALDH1L2Q3SY69 923 aa21.36■■□□□ 1.01
SNCAIP-220ENST00000514497 AK7Q96M32 723 aa21.36■■□□□ 1.01
SNCAIP-220ENST00000514497 TEX13AQ9BXU3 409 aaPredicted RBP21.36■■□□□ 1.01
SNCAIP-220ENST00000514497 ATG3Q9NT62 314 aa21.36■■□□□ 1.01
SNCAIP-220ENST00000514497 RCAN3Q9UKA8 241 aa21.36■■□□□ 1.01
SNCAIP-220ENST00000514497 KCPQ6ZWJ8 1503 aa21.35■■□□□ 1.01
SNCAIP-220ENST00000514497 SNRPA1P09661 255 aaKnown RBP21.35■■□□□ 1.01
SNCAIP-220ENST00000514497 LAMB4A4D0S4 1761 aa21.34■■□□□ 1.01
SNCAIP-220ENST00000514497 KCNQ3O43525 872 aa21.34■■□□□ 1.01
SNCAIP-220ENST00000514497 ARHGAP27Q6ZUM4 889 aa21.34■■□□□ 1.01
SNCAIP-220ENST00000514497 ZNF496Q96IT1 587 aaPredicted RBP21.34■■□□□ 1.01
SNCAIP-220ENST00000514497 ASAP1Q9ULH1 1129 aa21.34■■□□□ 1.01
SNCAIP-220ENST00000514497 PALLDQ8WX93 1383 aa21.34■■□□□ 1.01
SNCAIP-220ENST00000514497 BRPF1P55201 1214 aaPredicted RBP21.33■■□□□ 1.01
SNCAIP-220ENST00000514497 AMIGO3Q86WK7 504 aa21.33■■□□□ 1.01
SNCAIP-220ENST00000514497 TSPYL6Q8N831 410 aa21.33■■□□□ 1.01
SNCAIP-220ENST00000514497 BCS1LQ9Y276 419 aa21.33■■□□□ 1.01
SNCAIP-220ENST00000514497 KIF13BQ9NQT8 1826 aa21.33■■□□□ 1.01
SNCAIP-220ENST00000514497 KIAA1551Q9HCM1 1747 aa21.32■■□□□ 1
SNCAIP-220ENST00000514497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.32■■□□□ 1
SNCAIP-220ENST00000514497 CCDC30Q5VVM6 783 aa21.32■■□□□ 1
SNCAIP-220ENST00000514497 PXDNLA1KZ92 1463 aa21.32■■□□□ 1
SNCAIP-220ENST00000514497 HSPA1AP0DMV8 641 aaKnown RBP21.31■■□□□ 1
SNCAIP-220ENST00000514497 HSPA1BP0DMV9 641 aaKnown RBP21.31■■□□□ 1
SNCAIP-220ENST00000514497 RARSP54136 660 aaKnown RBP21.31■■□□□ 1
SNCAIP-220ENST00000514497 SMIM5Q71RC9 77 aa21.31■■□□□ 1
SNCAIP-220ENST00000514497 ELL2O00472 640 aaPredicted RBP21.3■■□□□ 1
SNCAIP-220ENST00000514497 KRT24Q2M2I5 525 aa21.29■■□□□ 1
SNCAIP-220ENST00000514497 ERBB4Q15303 1308 aa21.29■■□□□ 1
SNCAIP-220ENST00000514497 PTCD1O75127 700 aaKnown RBP21.28■■□□□ 1
SNCAIP-220ENST00000514497 HDGFL1Q5TGJ6 251 aa21.28■■□□□ 1
SNCAIP-220ENST00000514497 STK31Q9BXU1 1019 aa21.28■■□□□ 1
SNCAIP-220ENST00000514497 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.27■■□□□ 1
SNCAIP-220ENST00000514497 KDM2BQ8NHM5 1336 aa21.27■□□□□ 0.99
SNCAIP-220ENST00000514497 TNRC6CQ9HCJ0 1690 aaKnown RBP21.26■□□□□ 0.99
SNCAIP-220ENST00000514497 LOC102724428A0A0B4J2F2 783 aa21.26■□□□□ 0.99
SNCAIP-220ENST00000514497 A0A0G2JLW4 131 aa21.26■□□□□ 0.99
SNCAIP-220ENST00000514497 STARD3NLO95772 234 aa21.26■□□□□ 0.99
SNCAIP-220ENST00000514497 SSFA2P28290 1259 aa21.26■□□□□ 0.99
SNCAIP-220ENST00000514497 SIK1P57059 783 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms