RNA–Protein interactions for RNA: ENST00000514485.5

PACRGL-231, Transcript of parkin coregulated like, human

TSL 3

Gene PACRGL, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-231	ENST00000514485	CYP19A1	P11511	503 aa	Predicted RBP	28.21	■■■□□ 2.11
PACRGL-231	ENST00000514485	C1QTNF8	P60827	252 aa		28.21	■■■□□ 2.11
PACRGL-231	ENST00000514485	SOS1	Q07889	1333 aa	Predicted RBP	28.2	■■■□□ 2.11
PACRGL-231	ENST00000514485		A0A0G2JLW4	131 aa		28.2	■■■□□ 2.1
PACRGL-231	ENST00000514485	TGFB2	P61812	414 aa		28.2	■■■□□ 2.1
PACRGL-231	ENST00000514485	PLEKHF1	Q96S99	279 aa		28.2	■■■□□ 2.1
PACRGL-231	ENST00000514485	GIGYF1	O75420	1035 aa	Predicted RBP	28.19	■■■□□ 2.1
PACRGL-231	ENST00000514485	NRXN2	Q9P2S2	1712 aa		28.18	■■■□□ 2.1
PACRGL-231	ENST00000514485	DDR1	Q08345	913 aa		28.18	■■■□□ 2.1
PACRGL-231	ENST00000514485	TEF	Q10587	303 aa		28.18	■■■□□ 2.1
PACRGL-231	ENST00000514485	ZBTB1	Q9Y2K1	713 aa		28.18	■■■□□ 2.1
PACRGL-231	ENST00000514485	COL15A1	P39059	1388 aa		28.17	■■■□□ 2.1
PACRGL-231	ENST00000514485	CEMIP	Q8WUJ3	1361 aa		28.16	■■■□□ 2.1
PACRGL-231	ENST00000514485	DPEP1	P16444	411 aa		28.16	■■■□□ 2.1
PACRGL-231	ENST00000514485	VSIG10	Q8N0Z9	540 aa		28.16	■■■□□ 2.1
PACRGL-231	ENST00000514485	RTF1	Q92541	710 aa	Known RBP	28.16	■■■□□ 2.1
PACRGL-231	ENST00000514485	PNN	Q9H307	717 aa	Known RBP	28.16	■■■□□ 2.1
PACRGL-231	ENST00000514485	MAPK8IP3	Q9UPT6	1336 aa		28.16	■■■□□ 2.1
PACRGL-231	ENST00000514485	DCTN1	Q14203	1278 aa		28.15	■■■□□ 2.1
PACRGL-231	ENST00000514485	USPL1	Q5W0Q7	1092 aa		28.15	■■■□□ 2.1
PACRGL-231	ENST00000514485	MCM10	Q7L590	875 aa		28.15	■■■□□ 2.1
PACRGL-231	ENST00000514485	WDR43	Q15061	677 aa	Known RBP eCLIP	28.14	■■■□□ 2.1
PACRGL-231	ENST00000514485	BCS1L	Q9Y276	419 aa		28.14	■■■□□ 2.1
PACRGL-231	ENST00000514485	DLEC1	Q9Y238	1755 aa		28.14	■■■□□ 2.09
PACRGL-231	ENST00000514485	SCN7A	Q01118	1682 aa		28.13	■■■□□ 2.09
PACRGL-231	ENST00000514485	ZPR1	O75312	459 aa		28.13	■■■□□ 2.09
PACRGL-231	ENST00000514485	TTC5	Q8N0Z6	440 aa		28.13	■■■□□ 2.09
PACRGL-231	ENST00000514485	POLRMT	O00411	1230 aa	Known RBP	28.12	■■■□□ 2.09
PACRGL-231	ENST00000514485	NFE2L2	Q16236	605 aa		28.12	■■■□□ 2.09
PACRGL-231	ENST00000514485	KCNA3	P22001	575 aa		28.11	■■■□□ 2.09
PACRGL-231	ENST00000514485	TM4SF1	P30408	202 aa		28.11	■■■□□ 2.09
PACRGL-231	ENST00000514485	ZNF790	Q6PG37	636 aa		28.11	■■■□□ 2.09
PACRGL-231	ENST00000514485	CCDC146	Q8IYE0	955 aa		28.11	■■■□□ 2.09
PACRGL-231	ENST00000514485	ZNF496	Q96IT1	587 aa	Predicted RBP	28.11	■■■□□ 2.09
PACRGL-231	ENST00000514485	NARF	Q9UHQ1	456 aa		28.1	■■■□□ 2.09
PACRGL-231	ENST00000514485	SBF1	O95248	1867 aa		28.1	■■■□□ 2.09
PACRGL-231	ENST00000514485	HEG1	Q9ULI3	1381 aa		28.1	■■■□□ 2.09
PACRGL-231	ENST00000514485	SENP3-EIF4A1	A0A087X0R7	540 aa		28.09	■■■□□ 2.09
PACRGL-231	ENST00000514485	ANP32C	O43423	234 aa		28.09	■■■□□ 2.09
PACRGL-231	ENST00000514485	HTATSF1	O43719	755 aa	Known RBP	28.09	■■■□□ 2.09
PACRGL-231	ENST00000514485	CANX	P27824	592 aa	Known RBP	28.09	■■■□□ 2.09
PACRGL-231	ENST00000514485	ZNF526	Q8TF50	670 aa	Predicted RBP	28.09	■■■□□ 2.09
PACRGL-231	ENST00000514485	CEP350	Q5VT06	3117 aa		28.08	■■■□□ 2.09
PACRGL-231	ENST00000514485	BCL2L12	Q9HB09	334 aa		28.08	■■■□□ 2.09
PACRGL-231	ENST00000514485	ADAMTS8	Q9UP79	889 aa		28.08	■■■□□ 2.09
PACRGL-231	ENST00000514485	BCOR	Q6W2J9	1755 aa		28.07	■■■□□ 2.08
PACRGL-231	ENST00000514485	ANKRD31	Q8N7Z5	1873 aa		28.07	■■■□□ 2.08
PACRGL-231	ENST00000514485	CCDC184	Q52MB2	194 aa		28.07	■■■□□ 2.08
PACRGL-231	ENST00000514485	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.07	■■■□□ 2.08
PACRGL-231	ENST00000514485	BTBD11	A6QL63	1104 aa		28.06	■■■□□ 2.08
PACRGL-231	ENST00000514485	NFIX	Q14938	502 aa		28.06	■■■□□ 2.08
PACRGL-231	ENST00000514485	KCNQ3	O43525	872 aa		28.05	■■■□□ 2.08
PACRGL-231	ENST00000514485	STARD3NL	O95772	234 aa		28.05	■■■□□ 2.08
PACRGL-231	ENST00000514485	CHRNA5	P30532	468 aa		28.04	■■■□□ 2.08
PACRGL-231	ENST00000514485	EIF5	P55010	431 aa	Known RBP	28.04	■■■□□ 2.08
PACRGL-231	ENST00000514485	KDM3B	Q7LBC6	1761 aa		28.04	■■■□□ 2.08
PACRGL-231	ENST00000514485	ARHGAP27	Q6ZUM4	889 aa		28.03	■■■□□ 2.08
PACRGL-231	ENST00000514485	THUMPD2	Q9BTF0	503 aa	Known RBP	28.03	■■■□□ 2.08
PACRGL-231	ENST00000514485	PIM2	Q9P1W9	311 aa		28.03	■■■□□ 2.08
PACRGL-231	ENST00000514485	CCDC88A	Q3V6T2	1871 aa		28.03	■■■□□ 2.08
PACRGL-231	ENST00000514485	TMPO	P42166	694 aa	Known RBP	28.02	■■■□□ 2.08
PACRGL-231	ENST00000514485	RUNDC1	Q96C34	613 aa		28.02	■■■□□ 2.08
PACRGL-231	ENST00000514485	FMNL2	Q96PY5	1086 aa		28.02	■■■□□ 2.08
PACRGL-231	ENST00000514485	RRP7A	Q9Y3A4	280 aa	Known RBP	28.02	■■■□□ 2.08
PACRGL-231	ENST00000514485	RIPK4	P57078	832 aa		28.01	■■■□□ 2.07
PACRGL-231	ENST00000514485	CACNA1S	Q13698	1873 aa		28	■■■□□ 2.07
PACRGL-231	ENST00000514485	TEX13A	Q9BXU3	409 aa	Predicted RBP	28	■■■□□ 2.07
PACRGL-231	ENST00000514485	LAMB4	A4D0S4	1761 aa		27.99	■■■□□ 2.07
PACRGL-231	ENST00000514485	COL11A2	P13942	1736 aa	Predicted RBP	27.99	■■■□□ 2.07
PACRGL-231	ENST00000514485	TAF7	Q15545	349 aa	Predicted RBP	27.99	■■■□□ 2.07
PACRGL-231	ENST00000514485	NEUROD2	Q15784	382 aa		27.99	■■■□□ 2.07
PACRGL-231	ENST00000514485	SERPINB2	P05120	415 aa		27.98	■■■□□ 2.07
PACRGL-231	ENST00000514485	DALRD3	Q5D0E6	543 aa	Known RBP	27.98	■■■□□ 2.07
PACRGL-231	ENST00000514485	MIS18A	Q9NYP9	233 aa		27.98	■■■□□ 2.07
PACRGL-231	ENST00000514485	ZNF330	Q9Y3S2	320 aa	Predicted RBP	27.98	■■■□□ 2.07
PACRGL-231	ENST00000514485	CARMIL3	Q8ND23	1372 aa		27.98	■■■□□ 2.07
PACRGL-231	ENST00000514485		A0A087WZG4	1122 aa		27.97	■■■□□ 2.07
PACRGL-231	ENST00000514485	A1BG	P04217	495 aa		27.97	■■■□□ 2.07
PACRGL-231	ENST00000514485	BICDL1	Q6ZP65	573 aa		27.96	■■■□□ 2.07
PACRGL-231	ENST00000514485	IL6ST	P40189	918 aa	Predicted RBP	27.95	■■■□□ 2.06
PACRGL-231	ENST00000514485	MRS2	Q9HD23	443 aa		27.95	■■■□□ 2.06
PACRGL-231	ENST00000514485	TBC1D2B	Q9UPU7	963 aa		27.95	■■■□□ 2.06
PACRGL-231	ENST00000514485	PRAMEF22	A3QJZ6	481 aa		27.94	■■■□□ 2.06
PACRGL-231	ENST00000514485	TBC1D9B	Q66K14	1250 aa		27.94	■■■□□ 2.06
PACRGL-231	ENST00000514485	LMOD3	Q0VAK6	560 aa		27.93	■■■□□ 2.06
PACRGL-231	ENST00000514485	USP16	Q9Y5T5	823 aa		27.93	■■■□□ 2.06
PACRGL-231	ENST00000514485	KIF3C	O14782	793 aa		27.92	■■■□□ 2.06
PACRGL-231	ENST00000514485	PIP4K2A	P48426	406 aa	Predicted RBP	27.92	■■■□□ 2.06
PACRGL-231	ENST00000514485	C9orf131	Q5VYM1	1079 aa		27.91	■■■□□ 2.06
PACRGL-231	ENST00000514485	PNISR	Q8TF01	805 aa	Known RBP	27.9	■■■□□ 2.06
PACRGL-231	ENST00000514485	TIAM2	Q8IVF5	1701 aa		27.89	■■■□□ 2.06
PACRGL-231	ENST00000514485	TRIM35	Q9UPQ4	493 aa		27.89	■■■□□ 2.06
PACRGL-231	ENST00000514485	ARFGEF2	Q9Y6D5	1785 aa		27.88	■■■□□ 2.05
PACRGL-231	ENST00000514485	APAF1	O14727	1248 aa		27.88	■■■□□ 2.05
PACRGL-231	ENST00000514485	CAMTA2	O94983	1202 aa		27.88	■■■□□ 2.05
PACRGL-231	ENST00000514485	FER1L6	Q2WGJ9	1857 aa		27.87	■■■□□ 2.05
PACRGL-231	ENST00000514485	SNRPA1	P09661	255 aa	Known RBP	27.87	■■■□□ 2.05
PACRGL-231	ENST00000514485	C2CD5	Q86YS7	1000 aa		27.87	■■■□□ 2.05
PACRGL-231	ENST00000514485	CCDC24	Q8N4L8	307 aa		27.86	■■■□□ 2.05
PACRGL-231	ENST00000514485	TNRC6C	Q9HCJ0	1690 aa	Known RBP	27.86	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms