RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 RCAN3Q9UKA8 241 aa20.51■□□□□ 0.87
TRIM41-206ENST00000514219 TSR2Q969E8 191 aaKnown RBP20.5■□□□□ 0.87
TRIM41-206ENST00000514219 GPBP1L1Q9HC44 474 aaPredicted RBP20.5■□□□□ 0.87
TRIM41-206ENST00000514219 DOT1LQ8TEK3 1739 aa20.5■□□□□ 0.87
TRIM41-206ENST00000514219 NFATC2IPQ8NCF5 419 aa20.48■□□□□ 0.87
TRIM41-206ENST00000514219 SPINK5Q9NQ38 1064 aaPredicted RBP20.48■□□□□ 0.87
TRIM41-206ENST00000514219 EXOSC9Q06265 439 aaKnown RBP20.47■□□□□ 0.87
TRIM41-206ENST00000514219 ZNF790Q6PG37 636 aa20.47■□□□□ 0.87
TRIM41-206ENST00000514219 TOGARAM1Q9Y4F4 1720 aa20.47■□□□□ 0.87
TRIM41-206ENST00000514219 ADCY9O60503 1353 aa20.46■□□□□ 0.87
TRIM41-206ENST00000514219 NEFLP07196 543 aa20.46■□□□□ 0.87
TRIM41-206ENST00000514219 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
TRIM41-206ENST00000514219 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
TRIM41-206ENST00000514219 SMARCC1Q92922 1105 aaPredicted RBP20.46■□□□□ 0.87
TRIM41-206ENST00000514219 FMNL2Q96PY5 1086 aa20.46■□□□□ 0.87
TRIM41-206ENST00000514219 LY75O60449 1722 aa20.45■□□□□ 0.86
TRIM41-206ENST00000514219 KCNQ4P56696 695 aa20.45■□□□□ 0.86
TRIM41-206ENST00000514219 ITGB4P16144 1822 aa20.45■□□□□ 0.86
TRIM41-206ENST00000514219 KIF16BQ96L93 1317 aa20.45■□□□□ 0.86
TRIM41-206ENST00000514219 SYTL4Q96C24 671 aaPredicted RBP20.44■□□□□ 0.86
TRIM41-206ENST00000514219 MS4A1P11836 297 aa20.43■□□□□ 0.86
TRIM41-206ENST00000514219 ZNF526Q8TF50 670 aaPredicted RBP20.43■□□□□ 0.86
TRIM41-206ENST00000514219 STK31Q9BXU1 1019 aa20.43■□□□□ 0.86
TRIM41-206ENST00000514219 TEX13AQ9BXU3 409 aaPredicted RBP20.43■□□□□ 0.86
TRIM41-206ENST00000514219 UBR2Q8IWV8 1755 aa20.42■□□□□ 0.86
TRIM41-206ENST00000514219 EIF4A1P60842 406 aaKnown RBP20.42■□□□□ 0.86
TRIM41-206ENST00000514219 CCDC30Q5VVM6 783 aa20.42■□□□□ 0.86
TRIM41-206ENST00000514219 VSIG10Q8N0Z9 540 aa20.42■□□□□ 0.86
TRIM41-206ENST00000514219 IPO8O15397 1037 aaKnown RBP20.41■□□□□ 0.86
TRIM41-206ENST00000514219 SNRPA1P09661 255 aaKnown RBP20.41■□□□□ 0.86
TRIM41-206ENST00000514219 CANXP27824 592 aaKnown RBP20.4■□□□□ 0.86
TRIM41-206ENST00000514219 CACNA1FO60840 1977 aa20.39■□□□□ 0.86
TRIM41-206ENST00000514219 LAMB4A4D0S4 1761 aa20.39■□□□□ 0.86
TRIM41-206ENST00000514219 MSH5O43196 834 aa20.39■□□□□ 0.85
TRIM41-206ENST00000514219 PRIM1P49642 420 aaKnown RBP20.39■□□□□ 0.85
TRIM41-206ENST00000514219 COL23A1Q86Y22 540 aaPredicted RBP20.39■□□□□ 0.85
TRIM41-206ENST00000514219 SMC4Q9NTJ3 1288 aa20.39■□□□□ 0.85
TRIM41-206ENST00000514219 MIS18AQ9NYP9 233 aa20.39■□□□□ 0.85
TRIM41-206ENST00000514219 HEG1Q9ULI3 1381 aa20.38■□□□□ 0.85
TRIM41-206ENST00000514219 ERBB4Q15303 1308 aa20.38■□□□□ 0.85
TRIM41-206ENST00000514219 VAMP4O75379 141 aa20.38■□□□□ 0.85
TRIM41-206ENST00000514219 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
TRIM41-206ENST00000514219 BRPF1P55201 1214 aaPredicted RBP20.38■□□□□ 0.85
TRIM41-206ENST00000514219 MSL1Q68DK7 614 aa20.38■□□□□ 0.85
TRIM41-206ENST00000514219 PIGBQ92521 554 aa20.38■□□□□ 0.85
TRIM41-206ENST00000514219 CD2APQ9Y5K6 639 aa20.38■□□□□ 0.85
TRIM41-206ENST00000514219 HDGFL1Q5TGJ6 251 aa20.37■□□□□ 0.85
TRIM41-206ENST00000514219 C8orf58Q8NAV2 365 aa20.37■□□□□ 0.85
TRIM41-206ENST00000514219 ZNF831Q5JPB2 1677 aa20.37■□□□□ 0.85
TRIM41-206ENST00000514219 CCNL1Q9UK58 526 aaPredicted RBP20.36■□□□□ 0.85
TRIM41-206ENST00000514219 CICQ96RK0 1608 aaPredicted RBP20.35■□□□□ 0.85
TRIM41-206ENST00000514219 KCPQ6ZWJ8 1503 aa20.35■□□□□ 0.85
TRIM41-206ENST00000514219 STARD3NLO95772 234 aa20.34■□□□□ 0.85
TRIM41-206ENST00000514219 DBF4Q9UBU7 674 aaPredicted RBP20.34■□□□□ 0.85
TRIM41-206ENST00000514219 PTPRCP08575 1304 aa20.33■□□□□ 0.85
TRIM41-206ENST00000514219 ELL2O00472 640 aaPredicted RBP20.33■□□□□ 0.85
TRIM41-206ENST00000514219 KIF3CO14782 793 aa20.33■□□□□ 0.85
TRIM41-206ENST00000514219 SLC39A6Q13433 755 aa20.33■□□□□ 0.85
TRIM41-206ENST00000514219 ARHGAP45Q92619 1136 aa20.33■□□□□ 0.85
TRIM41-206ENST00000514219 ZNF496Q96IT1 587 aaPredicted RBP20.33■□□□□ 0.85
TRIM41-206ENST00000514219 PALLDQ8WX93 1383 aa20.33■□□□□ 0.84
TRIM41-206ENST00000514219 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
TRIM41-206ENST00000514219 RRP1P56182 461 aaKnown RBP20.32■□□□□ 0.84
TRIM41-206ENST00000514219 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
TRIM41-206ENST00000514219 ATG3Q9NT62 314 aa20.32■□□□□ 0.84
TRIM41-206ENST00000514219 SUPT16HQ9Y5B9 1047 aaKnown RBP20.32■□□□□ 0.84
TRIM41-206ENST00000514219 APLP1P51693 650 aa20.31■□□□□ 0.84
TRIM41-206ENST00000514219 ZKSCAN2Q63HK3 967 aa20.31■□□□□ 0.84
TRIM41-206ENST00000514219 NPM2Q86SE8 214 aaKnown RBP20.31■□□□□ 0.84
TRIM41-206ENST00000514219 SSH1Q8WYL5 1049 aa20.31■□□□□ 0.84
TRIM41-206ENST00000514219 API5Q9BZZ5 524 aaKnown RBP20.31■□□□□ 0.84
TRIM41-206ENST00000514219 CHMP4BQ9H444 224 aaKnown RBP20.31■□□□□ 0.84
TRIM41-206ENST00000514219 HYPKQ9NX55 129 aa20.31■□□□□ 0.84
TRIM41-206ENST00000514219 C5P01031 1676 aa20.31■□□□□ 0.84
TRIM41-206ENST00000514219 PTCD1O75127 700 aaKnown RBP20.3■□□□□ 0.84
TRIM41-206ENST00000514219 ASAP1Q9ULH1 1129 aa20.3■□□□□ 0.84
TRIM41-206ENST00000514219 PDE3AQ14432 1141 aa20.29■□□□□ 0.84
TRIM41-206ENST00000514219 ERICH6BQ5W0A0 696 aa20.29■□□□□ 0.84
TRIM41-206ENST00000514219 FTSJ3Q8IY81 847 aaKnown RBP20.29■□□□□ 0.84
TRIM41-206ENST00000514219 RBM42Q9BTD8 480 aaKnown RBP20.29■□□□□ 0.84
TRIM41-206ENST00000514219 PCNTO95613 3336 aa20.29■□□□□ 0.84
TRIM41-206ENST00000514219 KCNQ3O43525 872 aa20.28■□□□□ 0.84
TRIM41-206ENST00000514219 DDX58O95786 925 aaKnown RBP20.28■□□□□ 0.84
TRIM41-206ENST00000514219 DNAJC5GQ8N7S2 189 aa20.28■□□□□ 0.84
TRIM41-206ENST00000514219 SLC4A2P04920 1241 aa20.27■□□□□ 0.84
TRIM41-206ENST00000514219 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
TRIM41-206ENST00000514219 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.84
TRIM41-206ENST00000514219 DDX21Q9NR30 783 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRIM41-206ENST00000514219 LOC102724428A0A0B4J2F2 783 aa20.26■□□□□ 0.83
TRIM41-206ENST00000514219 SIK1P57059 783 aa20.26■□□□□ 0.83
TRIM41-206ENST00000514219 AAMPQ13685 434 aa20.26■□□□□ 0.83
TRIM41-206ENST00000514219 KRT24Q2M2I5 525 aa20.26■□□□□ 0.83
TRIM41-206ENST00000514219 ATF7IPQ6VMQ6 1270 aa20.26■□□□□ 0.83
TRIM41-206ENST00000514219 MRPL50Q8N5N7 158 aaKnown RBP20.26■□□□□ 0.83
TRIM41-206ENST00000514219 FLAD1Q8NFF5 587 aa20.26■□□□□ 0.83
TRIM41-206ENST00000514219 WWC3Q9ULE0 1092 aa20.26■□□□□ 0.83
TRIM41-206ENST00000514219 TAF1LQ8IZX4 1826 aa20.25■□□□□ 0.83
TRIM41-206ENST00000514219 BCAR3O75815 825 aa20.24■□□□□ 0.83
TRIM41-206ENST00000514219 ATP6V1AP38606 617 aa20.24■□□□□ 0.83
TRIM41-206ENST00000514219 BCL2L13Q9BXK5 485 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms