RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 ANXA1P04083 346 aa15.31■□□□□ 0.04
SDHA-216ENST00000514027 EIF4A1P60842 406 aaKnown RBP15.31■□□□□ 0.04
SDHA-216ENST00000514027 MPRIPQ6WCQ1 1025 aa15.31■□□□□ 0.04
SDHA-216ENST00000514027 ADGRL3Q9HAR2 1447 aa15.31■□□□□ 0.04
SDHA-216ENST00000514027 BTBD11A6QL63 1104 aa15.3■□□□□ 0.04
SDHA-216ENST00000514027 PTMSP20962 102 aa15.3■□□□□ 0.04
SDHA-216ENST00000514027 SKOR2Q2VWA4 1001 aaPredicted RBP15.3■□□□□ 0.04
SDHA-216ENST00000514027 TRIM44Q96DX7 344 aaPredicted RBP15.3■□□□□ 0.04
SDHA-216ENST00000514027 ESYT1Q9BSJ8 1104 aa15.3■□□□□ 0.04
SDHA-216ENST00000514027 GRPEL1Q9HAV7 217 aa15.3■□□□□ 0.04
SDHA-216ENST00000514027 ANO2Q9NQ90 1003 aa15.3■□□□□ 0.04
SDHA-216ENST00000514027 SURF6O75683 361 aaKnown RBP15.29■□□□□ 0.04
SDHA-216ENST00000514027 PPP1R42Q7Z4L9 355 aa15.29■□□□□ 0.04
SDHA-216ENST00000514027 NUTM1Q86Y26 1132 aa15.29■□□□□ 0.04
SDHA-216ENST00000514027 ZGPATQ8N5A5 531 aaKnown RBP15.29■□□□□ 0.04
SDHA-216ENST00000514027 ORAI2Q96SN7 254 aa15.29■□□□□ 0.04
SDHA-216ENST00000514027 ZHX1Q9UKY1 873 aaPredicted RBP15.29■□□□□ 0.04
SDHA-216ENST00000514027 TUBGCP6Q96RT7 1819 aa15.29■□□□□ 0.04
SDHA-216ENST00000514027 BAG4O95429 457 aaKnown RBP15.29■□□□□ 0.04
SDHA-216ENST00000514027 PKP1Q13835 747 aa15.29■□□□□ 0.04
SDHA-216ENST00000514027 KDM3BQ7LBC6 1761 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 PI4KAP2A4QPH2 592 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 NEK4P51957 841 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 AKAP4Q5JQC9 854 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 C1orf141Q5JVX7 400 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 PI4KAP1Q8N8J0 262 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 NAP1L2Q9ULW6 460 aaPredicted RBP15.28■□□□□ 0.04
SDHA-216ENST00000514027 MED1Q15648 1581 aaPredicted RBP15.28■□□□□ 0.04
SDHA-216ENST00000514027 ZNF142P52746 1687 aaPredicted RBP15.28■□□□□ 0.04
SDHA-216ENST00000514027 SRGAP3O43295 1099 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 MAP4K4O95819 1239 aaPredicted RBP15.28■□□□□ 0.04
SDHA-216ENST00000514027 NBPF7P0C2Y1 421 aaPredicted RBP15.28■□□□□ 0.04
SDHA-216ENST00000514027 MCCP23508 829 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 TERF1P54274 439 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 NUCB2P80303 420 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 PLEKHO1Q53GL0 409 aaPredicted RBP15.28■□□□□ 0.04
SDHA-216ENST00000514027 MCTP1Q6DN14 999 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 DNAAF4Q8WXU2 420 aa15.28■□□□□ 0.04
SDHA-216ENST00000514027 ISY1Q9ULR0 285 aaKnown RBP15.28■□□□□ 0.04
SDHA-216ENST00000514027 GCP02774 474 aa15.27■□□□□ 0.04
SDHA-216ENST00000514027 CHMLP26374 656 aa15.27■□□□□ 0.04
SDHA-216ENST00000514027 NOL8Q76FK4 1167 aaKnown RBP15.27■□□□□ 0.04
SDHA-216ENST00000514027 SSH3Q8TE77 659 aa15.27■□□□□ 0.04
SDHA-216ENST00000514027 DDX49Q9Y6V7 483 aaKnown RBP15.27■□□□□ 0.04
SDHA-216ENST00000514027 PXDNQ92626 1479 aa15.27■□□□□ 0.03
SDHA-216ENST00000514027 TAF7LQ5H9L4 462 aa15.27■□□□□ 0.03
SDHA-216ENST00000514027 LMO7Q8WWI1 1683 aa15.26■□□□□ 0.03
SDHA-216ENST00000514027 UTP14CQ5TAP6 766 aaKnown RBP15.26■□□□□ 0.03
SDHA-216ENST00000514027 STAP2Q9UGK3 403 aa15.26■□□□□ 0.03
SDHA-216ENST00000514027 ANKRD24Q8TF21 1146 aa15.25■□□□□ 0.03
SDHA-216ENST00000514027 CWC22Q9HCG8 908 aaKnown RBP15.25■□□□□ 0.03
SDHA-216ENST00000514027 PALD1Q9ULE6 856 aa15.25■□□□□ 0.03
SDHA-216ENST00000514027 HOXB7P09629 217 aa15.25■□□□□ 0.03
SDHA-216ENST00000514027 BEND3Q5T5X7 828 aa15.25■□□□□ 0.03
SDHA-216ENST00000514027 RHPN1Q8TCX5 695 aa15.25■□□□□ 0.03
SDHA-216ENST00000514027 RNMTO43148 476 aaKnown RBP15.24■□□□□ 0.03
SDHA-216ENST00000514027 OFD1O75665 1012 aa15.24■□□□□ 0.03
SDHA-216ENST00000514027 NCLP19338 710 aaKnown RBP15.24■□□□□ 0.03
SDHA-216ENST00000514027 OS9Q13438 667 aaPredicted RBP15.24■□□□□ 0.03
SDHA-216ENST00000514027 AMOTQ4VCS5 1084 aa15.24■□□□□ 0.03
SDHA-216ENST00000514027 GAS2L3Q86XJ1 694 aa15.24■□□□□ 0.03
SDHA-216ENST00000514027 FAM13BQ9NYF5 915 aa15.24■□□□□ 0.03
SDHA-216ENST00000514027 RAB11FIP3O75154 756 aa15.24■□□□□ 0.03
SDHA-216ENST00000514027 POLA2Q14181 598 aa15.24■□□□□ 0.03
SDHA-216ENST00000514027 FOXD4L5Q5VV16 416 aaPredicted RBP15.24■□□□□ 0.03
SDHA-216ENST00000514027 CLEC17AQ6ZS10 378 aa15.24■□□□□ 0.03
SDHA-216ENST00000514027 ARHGEF25Q86VW2 580 aa15.24■□□□□ 0.03
SDHA-216ENST00000514027 FOXD4L4Q8WXT5 416 aaPredicted RBP15.24■□□□□ 0.03
SDHA-216ENST00000514027 ADCY9O60503 1353 aa15.23■□□□□ 0.03
SDHA-216ENST00000514027 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
SDHA-216ENST00000514027 NPHP4O75161 1426 aaPredicted RBP15.23■□□□□ 0.03
SDHA-216ENST00000514027 DMTNQ08495 405 aa15.23■□□□□ 0.03
SDHA-216ENST00000514027 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.23■□□□□ 0.03
SDHA-216ENST00000514027 CHMP4AQ9BY43 222 aa15.23■□□□□ 0.03
SDHA-216ENST00000514027 CYP2E1P05181 493 aaPredicted RBP15.23■□□□□ 0.03
SDHA-216ENST00000514027 KIF1BPQ96EK5 621 aa15.23■□□□□ 0.03
SDHA-216ENST00000514027 TMX3Q96JJ7 454 aa15.23■□□□□ 0.03
SDHA-216ENST00000514027 DBF4Q9UBU7 674 aaPredicted RBP15.23■□□□□ 0.03
SDHA-216ENST00000514027 AOX1Q06278 1338 aa15.22■□□□□ 0.03
SDHA-216ENST00000514027 PRAMEF22A3QJZ6 481 aa15.22■□□□□ 0.03
SDHA-216ENST00000514027 KLHL40Q2TBA0 621 aa15.22■□□□□ 0.03
SDHA-216ENST00000514027 IL25Q9H293 177 aa15.22■□□□□ 0.03
SDHA-216ENST00000514027 PROSER3Q2NL68 480 aa15.21■□□□□ 0.03
SDHA-216ENST00000514027 MTERF4Q7Z6M4 381 aaKnown RBP15.21■□□□□ 0.03
SDHA-216ENST00000514027 UPF3BQ9BZI7 483 aaKnown RBP15.21■□□□□ 0.03
SDHA-216ENST00000514027 C9orf78Q9NZ63 289 aaPredicted RBP15.21■□□□□ 0.03
SDHA-216ENST00000514027 AXIN2Q9Y2T1 843 aa15.21■□□□□ 0.03
SDHA-216ENST00000514027 MAP3K2Q9Y2U5 619 aa15.21■□□□□ 0.03
SDHA-216ENST00000514027 PI4K2BQ8TCG2 481 aa15.2■□□□□ 0.02
SDHA-216ENST00000514027 PRDM10Q9NQV6 1147 aa15.2■□□□□ 0.02
SDHA-216ENST00000514027 NCAPD2Q15021 1401 aa15.2■□□□□ 0.02
SDHA-216ENST00000514027 SLIT3O75094 1523 aa15.2■□□□□ 0.02
SDHA-216ENST00000514027 ZC3H6P61129 1189 aaKnown RBP15.2■□□□□ 0.02
SDHA-216ENST00000514027 CAVIN1Q6NZI2 390 aaKnown RBP15.2■□□□□ 0.02
SDHA-216ENST00000514027 KRT28Q7Z3Y7 464 aa15.2■□□□□ 0.02
SDHA-216ENST00000514027 IPO4Q8TEX9 1081 aaKnown RBP15.2■□□□□ 0.02
SDHA-216ENST00000514027 CHAMP1Q96JM3 812 aa15.2■□□□□ 0.02
SDHA-216ENST00000514027 GIGYF1O75420 1035 aaPredicted RBP15.19■□□□□ 0.02
SDHA-216ENST00000514027 MCM2P49736 904 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms