RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 TNS4Q8IZW8 715 aa12.9□□□□□ -0.34
SH3D19-209ENST00000514013 BCS1LQ9Y276 419 aa12.9□□□□□ -0.34
SH3D19-209ENST00000514013 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
SH3D19-209ENST00000514013 SSFA2P28290 1259 aa12.89□□□□□ -0.35
SH3D19-209ENST00000514013 PRELPP51888 382 aa12.89□□□□□ -0.35
SH3D19-209ENST00000514013 ITPK1Q13572 414 aa12.89□□□□□ -0.35
SH3D19-209ENST00000514013 RBM46Q8TBY0 533 aaKnown RBP12.89□□□□□ -0.35
SH3D19-209ENST00000514013 PIGBQ92521 554 aa12.89□□□□□ -0.35
SH3D19-209ENST00000514013 TERF2IPQ9NYB0 399 aa12.89□□□□□ -0.35
SH3D19-209ENST00000514013 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
SH3D19-209ENST00000514013 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
SH3D19-209ENST00000514013 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
SH3D19-209ENST00000514013 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
SH3D19-209ENST00000514013 RAPGEF4Q8WZA2 1011 aa12.88□□□□□ -0.35
SH3D19-209ENST00000514013 COG3Q96JB2 828 aa12.88□□□□□ -0.35
SH3D19-209ENST00000514013 BOLA1Q9Y3E2 137 aa12.88□□□□□ -0.35
SH3D19-209ENST00000514013 RTL1A6NKG5 1358 aa12.88□□□□□ -0.35
SH3D19-209ENST00000514013 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
SH3D19-209ENST00000514013 GNPATO15228 680 aa12.87□□□□□ -0.35
SH3D19-209ENST00000514013 DPEP1P16444 411 aa12.87□□□□□ -0.35
SH3D19-209ENST00000514013 TATP17735 454 aaPredicted RBP12.87□□□□□ -0.35
SH3D19-209ENST00000514013 ARHGAP27Q6ZUM4 889 aa12.87□□□□□ -0.35
SH3D19-209ENST00000514013 LOC102724428A0A0B4J2F2 783 aa12.86□□□□□ -0.35
SH3D19-209ENST00000514013 SIK1P57059 783 aa12.86□□□□□ -0.35
SH3D19-209ENST00000514013 HSP90AB2PQ58FF8 381 aa12.86□□□□□ -0.35
SH3D19-209ENST00000514013 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
SH3D19-209ENST00000514013 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
SH3D19-209ENST00000514013 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
SH3D19-209ENST00000514013 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
SH3D19-209ENST00000514013 NSD3Q9BZ95 1437 aa12.86□□□□□ -0.35
SH3D19-209ENST00000514013 N4BP2Q86UW6 1770 aaPredicted RBP12.85□□□□□ -0.35
SH3D19-209ENST00000514013 SPOCK2Q92563 424 aa12.85□□□□□ -0.35
SH3D19-209ENST00000514013 KIF13BQ9NQT8 1826 aa12.84□□□□□ -0.35
SH3D19-209ENST00000514013 KCNA3P22001 575 aa12.84□□□□□ -0.35
SH3D19-209ENST00000514013 ASAP1Q9ULH1 1129 aa12.84□□□□□ -0.35
SH3D19-209ENST00000514013 FCHSD2O94868 740 aa12.83□□□□□ -0.36
SH3D19-209ENST00000514013 HOXB3P14651 431 aaPredicted RBP12.83□□□□□ -0.36
SH3D19-209ENST00000514013 TGFB2P61812 414 aa12.83□□□□□ -0.36
SH3D19-209ENST00000514013 FSTL1Q12841 308 aa12.83□□□□□ -0.36
SH3D19-209ENST00000514013 NEUROD1Q13562 356 aa12.83□□□□□ -0.36
SH3D19-209ENST00000514013 CARD11Q9BXL7 1154 aa12.83□□□□□ -0.36
SH3D19-209ENST00000514013 GGNBP2Q9H3C7 697 aa12.83□□□□□ -0.36
SH3D19-209ENST00000514013 ITGB4P16144 1822 aa12.83□□□□□ -0.36
SH3D19-209ENST00000514013 INSRP06213 1382 aa12.82□□□□□ -0.36
SH3D19-209ENST00000514013 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
SH3D19-209ENST00000514013 SLC4A9Q96Q91 983 aa12.82□□□□□ -0.36
SH3D19-209ENST00000514013 TESK2Q96S53 571 aa12.82□□□□□ -0.36
SH3D19-209ENST00000514013 KDRP35968 1356 aa12.81□□□□□ -0.36
SH3D19-209ENST00000514013 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
SH3D19-209ENST00000514013 FYB1O15117 783 aa12.81□□□□□ -0.36
SH3D19-209ENST00000514013 HSPA1AP0DMV8 641 aaKnown RBP12.81□□□□□ -0.36
SH3D19-209ENST00000514013 HSPA1BP0DMV9 641 aaKnown RBP12.81□□□□□ -0.36
SH3D19-209ENST00000514013 ATP6V1AP38606 617 aa12.81□□□□□ -0.36
SH3D19-209ENST00000514013 C16orf71Q8IYS4 520 aaPredicted RBP12.81□□□□□ -0.36
SH3D19-209ENST00000514013 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
SH3D19-209ENST00000514013 RRAGCQ9HB90 399 aa12.81□□□□□ -0.36
SH3D19-209ENST00000514013 PKD1L3Q7Z443 1732 aa12.81□□□□□ -0.36
SH3D19-209ENST00000514013 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
SH3D19-209ENST00000514013 HMGB2P26583 209 aaKnown RBP12.8□□□□□ -0.36
SH3D19-209ENST00000514013 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
SH3D19-209ENST00000514013 ATG3Q9NT62 314 aa12.8□□□□□ -0.36
SH3D19-209ENST00000514013 NCAPD2Q15021 1401 aa12.79□□□□□ -0.36
SH3D19-209ENST00000514013 BRCA1P38398 1863 aaKnown RBP12.79□□□□□ -0.36
SH3D19-209ENST00000514013 GYS1P13807 737 aa12.79□□□□□ -0.36
SH3D19-209ENST00000514013 IFNLR1Q8IU57 520 aaPredicted RBP12.79□□□□□ -0.36
SH3D19-209ENST00000514013 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
SH3D19-209ENST00000514013 RNF181Q9P0P0 153 aa12.79□□□□□ -0.36
SH3D19-209ENST00000514013 FLT4P35916 1363 aa12.79□□□□□ -0.36
SH3D19-209ENST00000514013 C4AP0C0L4 1744 aa12.79□□□□□ -0.36
SH3D19-209ENST00000514013 HOXB1P14653 301 aaPredicted RBP12.78□□□□□ -0.36
SH3D19-209ENST00000514013 TMF1P82094 1093 aa12.78□□□□□ -0.36
SH3D19-209ENST00000514013 NLGN1Q8N2Q7 840 aa12.78□□□□□ -0.36
SH3D19-209ENST00000514013 ARHGEF1Q92888 912 aaKnown RBP12.78□□□□□ -0.36
SH3D19-209ENST00000514013 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
SH3D19-209ENST00000514013 TRAPPC3LQ5T215 181 aa12.77□□□□□ -0.37
SH3D19-209ENST00000514013 CCDC87Q9NVE4 849 aa12.77□□□□□ -0.37
SH3D19-209ENST00000514013 EMILIN1Q9Y6C2 1016 aa12.77□□□□□ -0.37
SH3D19-209ENST00000514013 KDM2BQ8NHM5 1336 aa12.77□□□□□ -0.37
SH3D19-209ENST00000514013 CHRNA5P30532 468 aa12.76□□□□□ -0.37
SH3D19-209ENST00000514013 DDR1Q08345 913 aa12.76□□□□□ -0.37
SH3D19-209ENST00000514013 DOK7Q18PE1 504 aa12.76□□□□□ -0.37
SH3D19-209ENST00000514013 SMC1BQ8NDV3 1235 aa12.76□□□□□ -0.37
SH3D19-209ENST00000514013 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
SH3D19-209ENST00000514013 PHKG2P15735 406 aa12.75□□□□□ -0.37
SH3D19-209ENST00000514013 RASSF7Q02833 373 aa12.75□□□□□ -0.37
SH3D19-209ENST00000514013 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
SH3D19-209ENST00000514013 PIM2Q9P1W9 311 aa12.75□□□□□ -0.37
SH3D19-209ENST00000514013 KIF24Q5T7B8 1368 aa12.74□□□□□ -0.37
SH3D19-209ENST00000514013 ST20-MTHFSA0A0A6YYL1 179 aa12.74□□□□□ -0.37
SH3D19-209ENST00000514013 SRP68Q9UHB9 627 aaKnown RBP12.74□□□□□ -0.37
SH3D19-209ENST00000514013 SPG7Q9UQ90 795 aa12.74□□□□□ -0.37
SH3D19-209ENST00000514013 PARP3Q9Y6F1 533 aa12.74□□□□□ -0.37
SH3D19-209ENST00000514013 ARFGEF1Q9Y6D6 1849 aa12.74□□□□□ -0.37
SH3D19-209ENST00000514013 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
SH3D19-209ENST00000514013 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
SH3D19-209ENST00000514013 CNTNAP4Q9C0A0 1308 aa12.73□□□□□ -0.37
SH3D19-209ENST00000514013 RPS6KA4O75676 772 aa12.73□□□□□ -0.37
SH3D19-209ENST00000514013 SLC34A2O95436 690 aa12.73□□□□□ -0.37
SH3D19-209ENST00000514013 EYA1Q99502 592 aa12.73□□□□□ -0.37
SH3D19-209ENST00000514013 TONSLQ96HA7 1378 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms