RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 BRPF3Q9ULD4 1205 aa9.91□□□□□ -0.82
DDR1-273ENST00000513514 RGPD8O14715 1765 aaPredicted RBP9.91□□□□□ -0.82
DDR1-273ENST00000513514 RREB1Q92766 1687 aa9.9□□□□□ -0.82
DDR1-273ENST00000513514 GNAT3A8MTJ3 354 aa9.9□□□□□ -0.82
DDR1-273ENST00000513514 SLC4A2P04920 1241 aa9.9□□□□□ -0.82
DDR1-273ENST00000513514 GRPEL1Q9HAV7 217 aa9.9□□□□□ -0.82
DDR1-273ENST00000513514 BTG4Q9NY30 223 aa9.9□□□□□ -0.82
DDR1-273ENST00000513514 TSPYL4Q9UJ04 414 aa9.9□□□□□ -0.82
DDR1-273ENST00000513514 LRRC37A3O60309 1634 aa9.89□□□□□ -0.83
DDR1-273ENST00000513514 N4BP2Q86UW6 1770 aaPredicted RBP9.89□□□□□ -0.83
DDR1-273ENST00000513514 TRIM37O94972 964 aa9.89□□□□□ -0.83
DDR1-273ENST00000513514 XRCC6P12956 609 aaKnown RBP eCLIP9.89□□□□□ -0.83
DDR1-273ENST00000513514 GSPT1P15170 499 aaKnown RBP9.89□□□□□ -0.83
DDR1-273ENST00000513514 CLCN1P35523 988 aa9.89□□□□□ -0.83
DDR1-273ENST00000513514 ATP8B2P98198 1209 aa9.89□□□□□ -0.83
DDR1-273ENST00000513514 CAMKK2Q96RR4 588 aa9.89□□□□□ -0.83
DDR1-273ENST00000513514 THUMPD2Q9BTF0 503 aaKnown RBP9.89□□□□□ -0.83
DDR1-273ENST00000513514 OVOS2A0A0G2JMS6 1433 aa9.89□□□□□ -0.83
DDR1-273ENST00000513514 MAP3K19Q56UN5 1328 aa9.88□□□□□ -0.83
DDR1-273ENST00000513514 TRPM3Q9HCF6 1732 aaPredicted RBP9.88□□□□□ -0.83
DDR1-273ENST00000513514 CYP2E1P05181 493 aaPredicted RBP9.88□□□□□ -0.83
DDR1-273ENST00000513514 AMPHP49418 695 aa9.88□□□□□ -0.83
DDR1-273ENST00000513514 ZNF445P59923 1031 aa9.88□□□□□ -0.83
DDR1-273ENST00000513514 CCDC173Q0VFZ6 552 aa9.88□□□□□ -0.83
DDR1-273ENST00000513514 TAF7Q15545 349 aaPredicted RBP9.88□□□□□ -0.83
DDR1-273ENST00000513514 LRRCC1Q9C099 1032 aa9.88□□□□□ -0.83
DDR1-273ENST00000513514 PHF8Q9UPP1 1060 aa9.88□□□□□ -0.83
DDR1-273ENST00000513514 COL14A1Q05707 1796 aaKnown RBP9.88□□□□□ -0.83
DDR1-273ENST00000513514 ELL2O00472 640 aaPredicted RBP9.87□□□□□ -0.83
DDR1-273ENST00000513514 MBD3O95983 291 aa9.87□□□□□ -0.83
DDR1-273ENST00000513514 SDSP20132 328 aa9.87□□□□□ -0.83
DDR1-273ENST00000513514 PDE1AP54750 535 aa9.87□□□□□ -0.83
DDR1-273ENST00000513514 HSP90AB2PQ58FF8 381 aa9.87□□□□□ -0.83
DDR1-273ENST00000513514 KCNH5Q8NCM2 988 aa9.87□□□□□ -0.83
DDR1-273ENST00000513514 NGDNQ8NEJ9 315 aaKnown RBP9.87□□□□□ -0.83
DDR1-273ENST00000513514 CRYBG1Q9Y4K1 1723 aa9.87□□□□□ -0.83
DDR1-273ENST00000513514 MAP3K5Q99683 1374 aa9.87□□□□□ -0.83
DDR1-273ENST00000513514 SPATA31A5Q5VU36 1347 aa9.86□□□□□ -0.83
DDR1-273ENST00000513514 SPATA31A7Q8IWB4 1347 aa9.86□□□□□ -0.83
DDR1-273ENST00000513514 BAG4O95429 457 aaKnown RBP9.86□□□□□ -0.83
DDR1-273ENST00000513514 NCAPD2Q15021 1401 aa9.86□□□□□ -0.83
DDR1-273ENST00000513514 MTHFSDQ2M296 383 aaKnown RBP9.86□□□□□ -0.83
DDR1-273ENST00000513514 TICAM2Q86XR7 235 aa9.86□□□□□ -0.83
DDR1-273ENST00000513514 TRIM44Q96DX7 344 aaPredicted RBP9.86□□□□□ -0.83
DDR1-273ENST00000513514 PEAK1Q9H792 1746 aa9.86□□□□□ -0.83
DDR1-273ENST00000513514 ALS2Q96Q42 1657 aa9.86□□□□□ -0.83
DDR1-273ENST00000513514 PHRF1Q9P1Y6 1649 aaKnown RBP9.85□□□□□ -0.83
DDR1-273ENST00000513514 SALL3Q9BXA9 1300 aa9.85□□□□□ -0.83
DDR1-273ENST00000513514 MCM5P33992 734 aa9.85□□□□□ -0.83
DDR1-273ENST00000513514 TERF1P54274 439 aa9.85□□□□□ -0.83
DDR1-273ENST00000513514 FLIIQ13045 1269 aa9.85□□□□□ -0.83
DDR1-273ENST00000513514 AEBP1Q8IUX7 1158 aa9.85□□□□□ -0.83
DDR1-273ENST00000513514 SYAP1Q96A49 352 aaPredicted RBP9.85□□□□□ -0.83
DDR1-273ENST00000513514 PPP1R9BQ96SB3 815 aa9.85□□□□□ -0.83
DDR1-273ENST00000513514 EYA1Q99502 592 aa9.85□□□□□ -0.83
DDR1-273ENST00000513514 C1orf115Q9H7X2 142 aa9.85□□□□□ -0.83
DDR1-273ENST00000513514 CEMIPQ8WUJ3 1361 aa9.85□□□□□ -0.83
DDR1-273ENST00000513514 PHF14O94880 888 aa9.84□□□□□ -0.83
DDR1-273ENST00000513514 APBA3O96018 575 aa9.84□□□□□ -0.83
DDR1-273ENST00000513514 FBLN1P23142 703 aa9.84□□□□□ -0.83
DDR1-273ENST00000513514 CUL4AQ13619 759 aa9.84□□□□□ -0.83
DDR1-273ENST00000513514 AMOTQ4VCS5 1084 aa9.84□□□□□ -0.83
DDR1-273ENST00000513514 MCM10Q7L590 875 aa9.84□□□□□ -0.83
DDR1-273ENST00000513514 SSH3Q8TE77 659 aa9.84□□□□□ -0.83
DDR1-273ENST00000513514 MEIS3Q99687 375 aa9.84□□□□□ -0.83
DDR1-273ENST00000513514 PPP1R1BQ9UD71 204 aaPredicted RBP9.84□□□□□ -0.83
DDR1-273ENST00000513514 MX1P20591 662 aa9.83□□□□□ -0.84
DDR1-273ENST00000513514 HOXC9P31274 260 aa9.83□□□□□ -0.84
DDR1-273ENST00000513514 PSME1Q06323 249 aa9.83□□□□□ -0.84
DDR1-273ENST00000513514 DCTN1Q14203 1278 aa9.83□□□□□ -0.84
DDR1-273ENST00000513514 ERC1Q8IUD2 1116 aa9.83□□□□□ -0.84
DDR1-273ENST00000513514 ZNF784Q8NCA9 323 aaPredicted RBP9.83□□□□□ -0.84
DDR1-273ENST00000513514 DDX49Q9Y6V7 483 aaKnown RBP9.83□□□□□ -0.84
DDR1-273ENST00000513514 TTC41PQ6P2S7 1318 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 USP42Q9H9J4 1324 aaKnown RBP9.82□□□□□ -0.84
DDR1-273ENST00000513514 CEP350Q5VT06 3117 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 LETM1O95202 739 aaPredicted RBP9.82□□□□□ -0.84
DDR1-273ENST00000513514 UBTFL1P0CB47 393 aaPredicted RBP9.82□□□□□ -0.84
DDR1-273ENST00000513514 NLRP6P59044 892 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 FKBP5Q13451 457 aaPredicted RBP9.82□□□□□ -0.84
DDR1-273ENST00000513514 CHRNA2Q15822 529 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 CSPP1Q1MSJ5 1256 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 RUFY2Q8WXA3 655 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 IP6K1Q92551 441 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 KIF1BPQ96EK5 621 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 ESYT1Q9BSJ8 1104 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 ATP6V1DQ9Y5K8 247 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 PIK3C2AO00443 1686 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 SPATA31A1Q5TZJ5 1347 aa9.82□□□□□ -0.84
DDR1-273ENST00000513514 HIP1O00291 1037 aa9.81□□□□□ -0.84
DDR1-273ENST00000513514 ALDH1L1O75891 902 aa9.81□□□□□ -0.84
DDR1-273ENST00000513514 MTX1Q13505 466 aa9.81□□□□□ -0.84
DDR1-273ENST00000513514 POLA2Q14181 598 aa9.81□□□□□ -0.84
DDR1-273ENST00000513514 FAM184AQ8NB25 1140 aa9.81□□□□□ -0.84
DDR1-273ENST00000513514 PDGFDQ9GZP0 370 aaPredicted RBP9.81□□□□□ -0.84
DDR1-273ENST00000513514 SPON1Q9HCB6 807 aa9.81□□□□□ -0.84
DDR1-273ENST00000513514 ANO8Q9HCE9 1232 aaPredicted RBP9.81□□□□□ -0.84
DDR1-273ENST00000513514 FAM208AQ9UK61 1670 aaKnown RBP9.8□□□□□ -0.84
DDR1-273ENST00000513514 ESPNB1AK53 854 aa9.8□□□□□ -0.84
DDR1-273ENST00000513514 KCNQ2O43526 872 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms