RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 C16orf71Q8IYS4 520 aaPredicted RBP12.26□□□□□ -0.45
SNHG4-207ENST00000513259 DCAF5Q96JK2 942 aa12.26□□□□□ -0.45
SNHG4-207ENST00000513259 PIM2Q9P1W9 311 aa12.26□□□□□ -0.45
SNHG4-207ENST00000513259 SRP68Q9UHB9 627 aaKnown RBP12.26□□□□□ -0.45
SNHG4-207ENST00000513259 PTCD1O75127 700 aaKnown RBP12.25□□□□□ -0.45
SNHG4-207ENST00000513259 CABP4P57796 275 aa12.25□□□□□ -0.45
SNHG4-207ENST00000513259 DALRD3Q5D0E6 543 aaKnown RBP12.25□□□□□ -0.45
SNHG4-207ENST00000513259 COL13A1Q5TAT6 717 aaPredicted RBP12.25□□□□□ -0.45
SNHG4-207ENST00000513259 KLRG1Q96E93 195 aa12.25□□□□□ -0.45
SNHG4-207ENST00000513259 RRAGCQ9HB90 399 aa12.25□□□□□ -0.45
SNHG4-207ENST00000513259 KCPQ6ZWJ8 1503 aa12.25□□□□□ -0.45
SNHG4-207ENST00000513259 KDM6AO15550 1401 aaPredicted RBP12.24□□□□□ -0.45
SNHG4-207ENST00000513259 SBF1O95248 1867 aa12.24□□□□□ -0.45
SNHG4-207ENST00000513259 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
SNHG4-207ENST00000513259 CHRNA5P30532 468 aa12.24□□□□□ -0.45
SNHG4-207ENST00000513259 DDR1Q08345 913 aa12.24□□□□□ -0.45
SNHG4-207ENST00000513259 FSTL1Q12841 308 aa12.24□□□□□ -0.45
SNHG4-207ENST00000513259 PLEKHO1Q53GL0 409 aaPredicted RBP12.24□□□□□ -0.45
SNHG4-207ENST00000513259 ZNF530Q6P9A1 599 aaPredicted RBP12.24□□□□□ -0.45
SNHG4-207ENST00000513259 RNF181Q9P0P0 153 aa12.24□□□□□ -0.45
SNHG4-207ENST00000513259 PLEKHG2Q9H7P9 1386 aa12.23□□□□□ -0.45
SNHG4-207ENST00000513259 KDM2BQ8NHM5 1336 aa12.23□□□□□ -0.45
SNHG4-207ENST00000513259 CRKLP46109 303 aaKnown RBP12.23□□□□□ -0.45
SNHG4-207ENST00000513259 JMYQ8N9B5 988 aa12.23□□□□□ -0.45
SNHG4-207ENST00000513259 USP42Q9H9J4 1324 aaKnown RBP12.22□□□□□ -0.45
SNHG4-207ENST00000513259 MTHFSP49914 203 aa12.22□□□□□ -0.45
SNHG4-207ENST00000513259 NFATC2IPQ8NCF5 419 aa12.22□□□□□ -0.45
SNHG4-207ENST00000513259 POLR3GLQ9BT43 218 aa12.22□□□□□ -0.45
SNHG4-207ENST00000513259 TJP1Q07157 1748 aa12.21□□□□□ -0.45
SNHG4-207ENST00000513259 CD44P16070 742 aaKnown RBP12.21□□□□□ -0.45
SNHG4-207ENST00000513259 TM4SF1P30408 202 aa12.21□□□□□ -0.45
SNHG4-207ENST00000513259 AMOTQ4VCS5 1084 aa12.21□□□□□ -0.45
SNHG4-207ENST00000513259 INTS5Q6P9B9 1019 aaKnown RBP12.21□□□□□ -0.45
SNHG4-207ENST00000513259 AEBP1Q8IUX7 1158 aa12.21□□□□□ -0.45
SNHG4-207ENST00000513259 POLRMTO00411 1230 aaKnown RBP12.2□□□□□ -0.46
SNHG4-207ENST00000513259 EVX2Q03828 476 aa12.2□□□□□ -0.46
SNHG4-207ENST00000513259 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
SNHG4-207ENST00000513259 ADAMTS7Q9UKP4 1686 aa12.19□□□□□ -0.46
SNHG4-207ENST00000513259 RASSF7Q02833 373 aa12.19□□□□□ -0.46
SNHG4-207ENST00000513259 C1orf141Q5JVX7 400 aa12.19□□□□□ -0.46
SNHG4-207ENST00000513259 USPL1Q5W0Q7 1092 aa12.19□□□□□ -0.46
SNHG4-207ENST00000513259 PRELPP51888 382 aa12.18□□□□□ -0.46
SNHG4-207ENST00000513259 DNAJC10Q8IXB1 793 aa12.18□□□□□ -0.46
SNHG4-207ENST00000513259 SMC1BQ8NDV3 1235 aa12.18□□□□□ -0.46
SNHG4-207ENST00000513259 CCDC88AQ3V6T2 1871 aa12.18□□□□□ -0.46
SNHG4-207ENST00000513259 AFDNP55196 1824 aaKnown RBP12.18□□□□□ -0.46
SNHG4-207ENST00000513259 ZPR1O75312 459 aa12.17□□□□□ -0.46
SNHG4-207ENST00000513259 SULT6B1Q6IMI4 303 aa12.17□□□□□ -0.46
SNHG4-207ENST00000513259 TNS4Q8IZW8 715 aa12.17□□□□□ -0.46
SNHG4-207ENST00000513259 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
SNHG4-207ENST00000513259 SCN11AQ9UI33 1791 aa12.17□□□□□ -0.46
SNHG4-207ENST00000513259 MIER1Q8N108 512 aa12.16□□□□□ -0.46
SNHG4-207ENST00000513259 PANK3Q9H999 370 aa12.16□□□□□ -0.46
SNHG4-207ENST00000513259 SOS1Q07889 1333 aaPredicted RBP12.15□□□□□ -0.46
SNHG4-207ENST00000513259 GLTPD2A6NH11 291 aa12.15□□□□□ -0.46
SNHG4-207ENST00000513259 CYP19A1P11511 503 aaPredicted RBP12.15□□□□□ -0.46
SNHG4-207ENST00000513259 LMNB1P20700 586 aa12.15□□□□□ -0.46
SNHG4-207ENST00000513259 NFIXQ14938 502 aa12.15□□□□□ -0.46
SNHG4-207ENST00000513259 LGR6Q9HBX8 967 aa12.15□□□□□ -0.46
SNHG4-207ENST00000513259 SERPINB2P05120 415 aa12.14□□□□□ -0.47
SNHG4-207ENST00000513259 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
SNHG4-207ENST00000513259 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
SNHG4-207ENST00000513259 MORC1Q86VD1 984 aa12.14□□□□□ -0.47
SNHG4-207ENST00000513259 NARFQ9UHQ1 456 aa12.14□□□□□ -0.47
SNHG4-207ENST00000513259 DLEC1Q9Y238 1755 aa12.14□□□□□ -0.47
SNHG4-207ENST00000513259 IL13P35225 146 aa12.13□□□□□ -0.47
SNHG4-207ENST00000513259 MNX1P50219 401 aaPredicted RBP12.13□□□□□ -0.47
SNHG4-207ENST00000513259 AKAP4Q5JQC9 854 aa12.13□□□□□ -0.47
SNHG4-207ENST00000513259 C2CD5Q86YS7 1000 aa12.13□□□□□ -0.47
SNHG4-207ENST00000513259 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
SNHG4-207ENST00000513259 TTLL6Q8N841 843 aa12.13□□□□□ -0.47
SNHG4-207ENST00000513259 SLC52A2Q9HAB3 445 aa12.13□□□□□ -0.47
SNHG4-207ENST00000513259 BCL2L12Q9HB09 334 aa12.13□□□□□ -0.47
SNHG4-207ENST00000513259 NRXN2Q9P2S2 1712 aa12.13□□□□□ -0.47
SNHG4-207ENST00000513259 VIRMAQ69YN4 1812 aaKnown RBP12.13□□□□□ -0.47
SNHG4-207ENST00000513259 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
SNHG4-207ENST00000513259 TIAM2Q8IVF5 1701 aa12.12□□□□□ -0.47
SNHG4-207ENST00000513259 POTECB2RU33 542 aa12.12□□□□□ -0.47
SNHG4-207ENST00000513259 HSPA1AP0DMV8 641 aaKnown RBP12.12□□□□□ -0.47
SNHG4-207ENST00000513259 HSPA1BP0DMV9 641 aaKnown RBP12.12□□□□□ -0.47
SNHG4-207ENST00000513259 ZBTB1Q9Y2K1 713 aa12.12□□□□□ -0.47
SNHG4-207ENST00000513259 COL15A1P39059 1388 aa12.11□□□□□ -0.47
SNHG4-207ENST00000513259 CARMIL3Q8ND23 1372 aa12.11□□□□□ -0.47
SNHG4-207ENST00000513259 NFKBIEO00221 500 aa12.11□□□□□ -0.47
SNHG4-207ENST00000513259 RNMTO43148 476 aaKnown RBP12.11□□□□□ -0.47
SNHG4-207ENST00000513259 H0YIN7 160 aa12.1□□□□□ -0.47
SNHG4-207ENST00000513259 BICDL1Q6ZP65 573 aa12.1□□□□□ -0.47
SNHG4-207ENST00000513259 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
SNHG4-207ENST00000513259 HSPA5P11021 654 aaKnown RBP12.09□□□□□ -0.47
SNHG4-207ENST00000513259 CANXP27824 592 aaKnown RBP12.09□□□□□ -0.47
SNHG4-207ENST00000513259 CLCN6P51797 869 aa12.09□□□□□ -0.47
SNHG4-207ENST00000513259 TIMELESSQ9UNS1 1208 aa12.09□□□□□ -0.47
SNHG4-207ENST00000513259 ANKRD31Q8N7Z5 1873 aa12.08□□□□□ -0.48
SNHG4-207ENST00000513259 DICER1Q9UPY3 1922 aaKnown RBP12.08□□□□□ -0.48
SNHG4-207ENST00000513259 C21orf2O43822 256 aa12.08□□□□□ -0.48
SNHG4-207ENST00000513259 HMOX1P09601 288 aa12.08□□□□□ -0.48
SNHG4-207ENST00000513259 CCDC24Q8N4L8 307 aa12.08□□□□□ -0.48
SNHG4-207ENST00000513259 ZNF622Q969S3 477 aaKnown RBP eCLIP12.08□□□□□ -0.48
SNHG4-207ENST00000513259 MRC1P22897 1456 aa12.08□□□□□ -0.48
SNHG4-207ENST00000513259 EIF5P55010 431 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms