RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 USP16Q9Y5T5 823 aa16.12■□□□□ 0.17
PDPN-210ENST00000513143 PLSCR1O15162 318 aa16.11■□□□□ 0.17
PDPN-210ENST00000513143 EIF2S2P20042 333 aaKnown RBP16.11■□□□□ 0.17
PDPN-210ENST00000513143 HDGFL1Q5TGJ6 251 aa16.11■□□□□ 0.17
PDPN-210ENST00000513143 SSH1Q8WYL5 1049 aa16.11■□□□□ 0.17
PDPN-210ENST00000513143 RGPD3A6NKT7 1758 aaPredicted RBP16.11■□□□□ 0.17
PDPN-210ENST00000513143 RGPD4Q7Z3J3 1758 aa16.11■□□□□ 0.17
PDPN-210ENST00000513143 COL5A3P25940 1745 aaPredicted RBP16.1■□□□□ 0.17
PDPN-210ENST00000513143 APBA3O96018 575 aa16.1■□□□□ 0.17
PDPN-210ENST00000513143 ATP6V1AP38606 617 aa16.1■□□□□ 0.17
PDPN-210ENST00000513143 DNAJC10Q8IXB1 793 aa16.1■□□□□ 0.17
PDPN-210ENST00000513143 TAF1LQ8IZX4 1826 aa16.09■□□□□ 0.17
PDPN-210ENST00000513143 STARD3NLO95772 234 aa16.09■□□□□ 0.17
PDPN-210ENST00000513143 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
PDPN-210ENST00000513143 BRPF1P55201 1214 aaPredicted RBP16.09■□□□□ 0.17
PDPN-210ENST00000513143 ITPK1Q13572 414 aa16.09■□□□□ 0.17
PDPN-210ENST00000513143 NECTIN2Q92692 538 aa16.09■□□□□ 0.17
PDPN-210ENST00000513143 TCERG1O14776 1098 aaKnown RBP16.08■□□□□ 0.16
PDPN-210ENST00000513143 BCAR3O75815 825 aa16.08■□□□□ 0.16
PDPN-210ENST00000513143 CYP19A1P11511 503 aaPredicted RBP16.08■□□□□ 0.16
PDPN-210ENST00000513143 SMC4Q9NTJ3 1288 aa16.08■□□□□ 0.16
PDPN-210ENST00000513143 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.16
PDPN-210ENST00000513143 ERBB4Q15303 1308 aa16.07■□□□□ 0.16
PDPN-210ENST00000513143 MYH14Q7Z406 1995 aaKnown RBP16.07■□□□□ 0.16
PDPN-210ENST00000513143 SLC27A3Q5K4L6 730 aa16.07■□□□□ 0.16
PDPN-210ENST00000513143 MRPL50Q8N5N7 158 aaKnown RBP16.07■□□□□ 0.16
PDPN-210ENST00000513143 BCL2L13Q9BXK5 485 aa16.07■□□□□ 0.16
PDPN-210ENST00000513143 STK31Q9BXU1 1019 aa16.07■□□□□ 0.16
PDPN-210ENST00000513143 CHPF2Q9P2E5 772 aa16.07■□□□□ 0.16
PDPN-210ENST00000513143 DBF4Q9UBU7 674 aaPredicted RBP16.07■□□□□ 0.16
PDPN-210ENST00000513143 RREB1Q92766 1687 aa16.06■□□□□ 0.16
PDPN-210ENST00000513143 PDIA6Q15084 440 aa16.06■□□□□ 0.16
PDPN-210ENST00000513143 CCDC125Q86Z20 511 aa16.06■□□□□ 0.16
PDPN-210ENST00000513143 DDX21Q9NR30 783 aaKnown RBP eCLIP16.06■□□□□ 0.16
PDPN-210ENST00000513143 A1BGP04217 495 aa16.05■□□□□ 0.16
PDPN-210ENST00000513143 KCNQ4P56696 695 aa16.05■□□□□ 0.16
PDPN-210ENST00000513143 TXNRD1Q16881 649 aa16.05■□□□□ 0.16
PDPN-210ENST00000513143 PROM2Q8N271 834 aa16.05■□□□□ 0.16
PDPN-210ENST00000513143 LRRC4BQ9NT99 713 aa16.05■□□□□ 0.16
PDPN-210ENST00000513143 RNF123Q5XPI4 1314 aa16.05■□□□□ 0.16
PDPN-210ENST00000513143 NBPF26B4DH59 902 aa16.04■□□□□ 0.16
PDPN-210ENST00000513143 HMGB2P26583 209 aaKnown RBP16.04■□□□□ 0.16
PDPN-210ENST00000513143 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
PDPN-210ENST00000513143 PROSER3Q2NL68 480 aa16.04■□□□□ 0.16
PDPN-210ENST00000513143 NBPF14Q5TI25 921 aa16.04■□□□□ 0.16
PDPN-210ENST00000513143 NBPF10Q6P3W6 841 aaKnown RBP16.04■□□□□ 0.16
PDPN-210ENST00000513143 NBPF15Q8N660 670 aa16.04■□□□□ 0.16
PDPN-210ENST00000513143 LINC00116Q8NCU8 138 aa16.04■□□□□ 0.16
PDPN-210ENST00000513143 SUPT16HQ9Y5B9 1047 aaKnown RBP16.04■□□□□ 0.16
PDPN-210ENST00000513143 CRKLP46109 303 aaKnown RBP16.03■□□□□ 0.16
PDPN-210ENST00000513143 RC3H1Q5TC82 1133 aaKnown RBP16.03■□□□□ 0.16
PDPN-210ENST00000513143 INTS5Q6P9B9 1019 aaKnown RBP16.03■□□□□ 0.16
PDPN-210ENST00000513143 LRP10Q7Z4F1 713 aa16.03■□□□□ 0.16
PDPN-210ENST00000513143 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
PDPN-210ENST00000513143 KIF16BQ96L93 1317 aa16.03■□□□□ 0.16
PDPN-210ENST00000513143 CNTNAP4Q9C0A0 1308 aa16.03■□□□□ 0.16
PDPN-210ENST00000513143 C4BP0C0L5 1744 aa16.02■□□□□ 0.16
PDPN-210ENST00000513143 ANXA1P04083 346 aa16.02■□□□□ 0.16
PDPN-210ENST00000513143 PIP4K2AP48426 406 aaPredicted RBP16.02■□□□□ 0.16
PDPN-210ENST00000513143 G2E3Q7L622 706 aa16.02■□□□□ 0.16
PDPN-210ENST00000513143 CAMKK2Q96RR4 588 aa16.02■□□□□ 0.16
PDPN-210ENST00000513143 CCDC87Q9NVE4 849 aa16.02■□□□□ 0.16
PDPN-210ENST00000513143 MYL6BP14649 208 aa16.01■□□□□ 0.15
PDPN-210ENST00000513143 BAG6P46379 1132 aa16.01■□□□□ 0.15
PDPN-210ENST00000513143 EN1Q05925 392 aaPredicted RBP16.01■□□□□ 0.15
PDPN-210ENST00000513143 ARHGAP45Q92619 1136 aa16.01■□□□□ 0.15
PDPN-210ENST00000513143 PHAXQ9H814 394 aaKnown RBP16.01■□□□□ 0.15
PDPN-210ENST00000513143 NOB1Q9ULX3 412 aaKnown RBP16.01■□□□□ 0.15
PDPN-210ENST00000513143 ZBTB1Q9Y2K1 713 aa16.01■□□□□ 0.15
PDPN-210ENST00000513143 IPO8O15397 1037 aaKnown RBP16■□□□□ 0.15
PDPN-210ENST00000513143 RRP1P56182 461 aaKnown RBP16■□□□□ 0.15
PDPN-210ENST00000513143 FLIIQ13045 1269 aa16■□□□□ 0.15
PDPN-210ENST00000513143 GOLGA6L2Q8N9W4 650 aaPredicted RBP16■□□□□ 0.15
PDPN-210ENST00000513143 FRAT1Q92837 279 aaPredicted RBP16■□□□□ 0.15
PDPN-210ENST00000513143 PTPRCP08575 1304 aa16■□□□□ 0.15
PDPN-210ENST00000513143 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
PDPN-210ENST00000513143 IL6STP40189 918 aaPredicted RBP15.99■□□□□ 0.15
PDPN-210ENST00000513143 EIF5P55010 431 aaKnown RBP15.99■□□□□ 0.15
PDPN-210ENST00000513143 EZH2Q15910 746 aaKnown RBP15.99■□□□□ 0.15
PDPN-210ENST00000513143 ILDR2Q71H61 639 aa15.99■□□□□ 0.15
PDPN-210ENST00000513143 PLIN1O60240 522 aa15.98■□□□□ 0.15
PDPN-210ENST00000513143 ZKSCAN2Q63HK3 967 aa15.98■□□□□ 0.15
PDPN-210ENST00000513143 ATF7IPQ6VMQ6 1270 aa15.98■□□□□ 0.15
PDPN-210ENST00000513143 DEFB132Q7Z7B7 95 aa15.98■□□□□ 0.15
PDPN-210ENST00000513143 UPF1Q92900 1129 aaKnown RBP eCLIP15.98■□□□□ 0.15
PDPN-210ENST00000513143 UBR3Q6ZT12 1888 aa15.98■□□□□ 0.15
PDPN-210ENST00000513143 RPS6KA4O75676 772 aa15.97■□□□□ 0.15
PDPN-210ENST00000513143 COPS6Q7L5N1 327 aa15.97■□□□□ 0.15
PDPN-210ENST00000513143 XAGE3Q8WTP9 111 aa15.97■□□□□ 0.15
PDPN-210ENST00000513143 TRIM27P14373 513 aa15.96■□□□□ 0.15
PDPN-210ENST00000513143 AIMP1Q12904 312 aaKnown RBP15.96■□□□□ 0.15
PDPN-210ENST00000513143 FKBP5Q13451 457 aaPredicted RBP15.96■□□□□ 0.15
PDPN-210ENST00000513143 API5Q9BZZ5 524 aaKnown RBP15.96■□□□□ 0.15
PDPN-210ENST00000513143 NUP188Q5SRE5 1749 aa15.96■□□□□ 0.15
PDPN-210ENST00000513143 GNPATO15228 680 aa15.95■□□□□ 0.14
PDPN-210ENST00000513143 DDX58O95786 925 aaKnown RBP15.95■□□□□ 0.14
PDPN-210ENST00000513143 TTLL7Q6ZT98 887 aa15.95■□□□□ 0.14
PDPN-210ENST00000513143 AKT1S1Q96B36 256 aa15.95■□□□□ 0.14
PDPN-210ENST00000513143 AK7Q96M32 723 aa15.95■□□□□ 0.14
PDPN-210ENST00000513143 ADCY9O60503 1353 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms