RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
SSBP2-216ENST00000512923 SLFN5Q08AF3 891 aa13.08□□□□□ -0.32
SSBP2-216ENST00000512923 SGIP1Q9BQI5 828 aa13.08□□□□□ -0.32
SSBP2-216ENST00000512923 TMOD3Q9NYL9 352 aa13.08□□□□□ -0.32
SSBP2-216ENST00000512923 UBR2Q8IWV8 1755 aa13.07□□□□□ -0.32
SSBP2-216ENST00000512923 ZNF853P0CG23 659 aa13.07□□□□□ -0.32
SSBP2-216ENST00000512923 NFATC2IPQ8NCF5 419 aa13.07□□□□□ -0.32
SSBP2-216ENST00000512923 CDCA7LQ96GN5 454 aa13.07□□□□□ -0.32
SSBP2-216ENST00000512923 TSPYL4Q9UJ04 414 aa13.07□□□□□ -0.32
SSBP2-216ENST00000512923 BTBD11A6QL63 1104 aa13.06□□□□□ -0.32
SSBP2-216ENST00000512923 CHL1O00533 1208 aa13.06□□□□□ -0.32
SSBP2-216ENST00000512923 SYTL4Q96C24 671 aaPredicted RBP13.06□□□□□ -0.32
SSBP2-216ENST00000512923 MBIPQ9NS73 344 aa13.06□□□□□ -0.32
SSBP2-216ENST00000512923 FANCIQ9NVI1 1328 aa13.06□□□□□ -0.32
SSBP2-216ENST00000512923 BTAF1O14981 1849 aa13.06□□□□□ -0.32
SSBP2-216ENST00000512923 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
SSBP2-216ENST00000512923 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
SSBP2-216ENST00000512923 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
SSBP2-216ENST00000512923 DUSP27Q5VZP5 1158 aa13.05□□□□□ -0.32
SSBP2-216ENST00000512923 FAM196AQ6ZSG2 479 aa13.05□□□□□ -0.32
SSBP2-216ENST00000512923 TRMT2AQ8IZ69 625 aaKnown RBP13.05□□□□□ -0.32
SSBP2-216ENST00000512923 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
SSBP2-216ENST00000512923 ACSBG1Q96GR2 724 aa13.05□□□□□ -0.32
SSBP2-216ENST00000512923 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
SSBP2-216ENST00000512923 KAT6BQ8WYB5 2073 aa13.04□□□□□ -0.32
SSBP2-216ENST00000512923 TTC5Q8N0Z6 440 aa13.03□□□□□ -0.32
SSBP2-216ENST00000512923 PIGBQ92521 554 aa13.03□□□□□ -0.32
SSBP2-216ENST00000512923 MIS18AQ9NYP9 233 aa13.03□□□□□ -0.32
SSBP2-216ENST00000512923 LAMB4A4D0S4 1761 aa13.02□□□□□ -0.32
SSBP2-216ENST00000512923 CENPBP07199 599 aaPredicted RBP13.02□□□□□ -0.33
SSBP2-216ENST00000512923 ZNF790Q6PG37 636 aa13.02□□□□□ -0.33
SSBP2-216ENST00000512923 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.33
SSBP2-216ENST00000512923 KCPQ6ZWJ8 1503 aa13.02□□□□□ -0.33
SSBP2-216ENST00000512923 EP400Q96L91 3159 aa13.01□□□□□ -0.33
SSBP2-216ENST00000512923 KCNQ2O43526 872 aa13.01□□□□□ -0.33
SSBP2-216ENST00000512923 SLC39A6Q13433 755 aa13.01□□□□□ -0.33
SSBP2-216ENST00000512923 C5P01031 1676 aa13.01□□□□□ -0.33
SSBP2-216ENST00000512923 TNS1Q9HBL0 1735 aaKnown RBP13.01□□□□□ -0.33
SSBP2-216ENST00000512923 ZNF831Q5JPB2 1677 aa13□□□□□ -0.33
SSBP2-216ENST00000512923 CICQ96RK0 1608 aaPredicted RBP13□□□□□ -0.33
SSBP2-216ENST00000512923 SOS1Q07889 1333 aaPredicted RBP13□□□□□ -0.33
SSBP2-216ENST00000512923 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
SSBP2-216ENST00000512923 EXOSC9Q06265 439 aaKnown RBP13□□□□□ -0.33
SSBP2-216ENST00000512923 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
SSBP2-216ENST00000512923 BCL11BQ9C0K0 894 aaPredicted RBP13□□□□□ -0.33
SSBP2-216ENST00000512923 LY75O60449 1722 aa12.99□□□□□ -0.33
SSBP2-216ENST00000512923 CT47B1P0C2W7 299 aaPredicted RBP12.99□□□□□ -0.33
SSBP2-216ENST00000512923 SMARCC1Q92922 1105 aaPredicted RBP12.99□□□□□ -0.33
SSBP2-216ENST00000512923 TMEM106CQ9BVX2 250 aa12.99□□□□□ -0.33
SSBP2-216ENST00000512923 ATG3Q9NT62 314 aa12.99□□□□□ -0.33
SSBP2-216ENST00000512923 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
SSBP2-216ENST00000512923 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
SSBP2-216ENST00000512923 PALLDQ8WX93 1383 aa12.98□□□□□ -0.33
SSBP2-216ENST00000512923 KCNQ3O43525 872 aa12.98□□□□□ -0.33
SSBP2-216ENST00000512923 TRIM37O94972 964 aa12.98□□□□□ -0.33
SSBP2-216ENST00000512923 HOXB7P09629 217 aa12.98□□□□□ -0.33
SSBP2-216ENST00000512923 TWISTNBQ3B726 338 aaPredicted RBP12.98□□□□□ -0.33
SSBP2-216ENST00000512923 RGPD3A6NKT7 1758 aaPredicted RBP12.98□□□□□ -0.33
SSBP2-216ENST00000512923 RGPD4Q7Z3J3 1758 aa12.98□□□□□ -0.33
SSBP2-216ENST00000512923 HEG1Q9ULI3 1381 aa12.97□□□□□ -0.33
SSBP2-216ENST00000512923 TJP1Q07157 1748 aa12.97□□□□□ -0.33
SSBP2-216ENST00000512923 C8orf58Q8NAV2 365 aa12.97□□□□□ -0.33
SSBP2-216ENST00000512923 ZNF496Q96IT1 587 aaPredicted RBP12.97□□□□□ -0.33
SSBP2-216ENST00000512923 COLQQ9Y215 455 aaPredicted RBP12.97□□□□□ -0.33
SSBP2-216ENST00000512923 PTCD1O75127 700 aaKnown RBP12.96□□□□□ -0.33
SSBP2-216ENST00000512923 KRT24Q2M2I5 525 aa12.96□□□□□ -0.33
SSBP2-216ENST00000512923 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.33
SSBP2-216ENST00000512923 ZNF428Q96B54 188 aa12.96□□□□□ -0.33
SSBP2-216ENST00000512923 CHMP4AQ9BY43 222 aa12.96□□□□□ -0.33
SSBP2-216ENST00000512923 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
SSBP2-216ENST00000512923 GIGYF1O75420 1035 aaPredicted RBP12.95□□□□□ -0.34
SSBP2-216ENST00000512923 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
SSBP2-216ENST00000512923 GSE1Q14687 1217 aa12.95□□□□□ -0.34
SSBP2-216ENST00000512923 PTF1AQ7RTS3 328 aa12.95□□□□□ -0.34
SSBP2-216ENST00000512923 TSPYL6Q8N831 410 aa12.95□□□□□ -0.34
SSBP2-216ENST00000512923 COL5A3P25940 1745 aaPredicted RBP12.95□□□□□ -0.34
SSBP2-216ENST00000512923 TAF1LQ8IZX4 1826 aa12.93□□□□□ -0.34
SSBP2-216ENST00000512923 LOC102724428A0A0B4J2F2 783 aa12.93□□□□□ -0.34
SSBP2-216ENST00000512923 VAMP4O75379 141 aa12.93□□□□□ -0.34
SSBP2-216ENST00000512923 SIK1P57059 783 aa12.93□□□□□ -0.34
SSBP2-216ENST00000512923 HDGFL1Q5TGJ6 251 aa12.93□□□□□ -0.34
SSBP2-216ENST00000512923 SPOCK2Q92563 424 aa12.93□□□□□ -0.34
SSBP2-216ENST00000512923 TEX13AQ9BXU3 409 aaPredicted RBP12.93□□□□□ -0.34
SSBP2-216ENST00000512923 CACNA1FO60840 1977 aa12.93□□□□□ -0.34
SSBP2-216ENST00000512923 ALDH1L2Q3SY69 923 aa12.92□□□□□ -0.34
SSBP2-216ENST00000512923 CCDC30Q5VVM6 783 aa12.92□□□□□ -0.34
SSBP2-216ENST00000512923 RCAN3Q9UKA8 241 aa12.92□□□□□ -0.34
SSBP2-216ENST00000512923 PRAMEF22A3QJZ6 481 aa12.91□□□□□ -0.34
SSBP2-216ENST00000512923 SEC24BO95487 1268 aa12.91□□□□□ -0.34
SSBP2-216ENST00000512923 APBA3O96018 575 aa12.91□□□□□ -0.34
SSBP2-216ENST00000512923 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
SSBP2-216ENST00000512923 SF3B2Q13435 895 aaKnown RBP12.91□□□□□ -0.34
SSBP2-216ENST00000512923 STK31Q9BXU1 1019 aa12.91□□□□□ -0.34
SSBP2-216ENST00000512923 RREB1Q92766 1687 aa12.91□□□□□ -0.34
SSBP2-216ENST00000512923 PLSCR1O15162 318 aa12.9□□□□□ -0.34
SSBP2-216ENST00000512923 STARD3NLO95772 234 aa12.9□□□□□ -0.34
SSBP2-216ENST00000512923 EIF2S2P20042 333 aaKnown RBP12.9□□□□□ -0.34
SSBP2-216ENST00000512923 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
SSBP2-216ENST00000512923 DNAJC10Q8IXB1 793 aa12.9□□□□□ -0.34
SSBP2-216ENST00000512923 SLC4A9Q96Q91 983 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms