RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 JCADQ9P266 1359 aa10.21□□□□□ -0.78
RFC1-215ENST00000512881 PER1O15534 1290 aaPredicted RBP10.2□□□□□ -0.78
RFC1-215ENST00000512881 EHBP1Q8NDI1 1231 aa10.2□□□□□ -0.78
RFC1-215ENST00000512881 MAP10Q9P2G4 905 aa10.2□□□□□ -0.78
RFC1-215ENST00000512881 DACH1Q9UI36 760 aa10.2□□□□□ -0.78
RFC1-215ENST00000512881 ROBO1Q9Y6N7 1651 aa10.2□□□□□ -0.78
RFC1-215ENST00000512881 SETBP1Q9Y6X0 1596 aa10.2□□□□□ -0.78
RFC1-215ENST00000512881 CLTCL1P53675 1640 aa10.19□□□□□ -0.78
RFC1-215ENST00000512881 SIAH2O43255 324 aa10.19□□□□□ -0.78
RFC1-215ENST00000512881 RGL3Q3MIN7 710 aa10.19□□□□□ -0.78
RFC1-215ENST00000512881 POTEAQ6S8J7 498 aa10.19□□□□□ -0.78
RFC1-215ENST00000512881 ZNF511Q8NB15 262 aa10.19□□□□□ -0.78
RFC1-215ENST00000512881 BAP1Q92560 729 aa10.19□□□□□ -0.78
RFC1-215ENST00000512881 SPHKAPQ2M3C7 1700 aa10.19□□□□□ -0.78
RFC1-215ENST00000512881 NEXMIFQ5QGS0 1516 aa10.18□□□□□ -0.78
RFC1-215ENST00000512881 AXIN1O15169 862 aa10.18□□□□□ -0.78
RFC1-215ENST00000512881 RTL5Q5HYW3 569 aaPredicted RBP10.18□□□□□ -0.78
RFC1-215ENST00000512881 RSPH6AQ9H0K4 717 aa10.18□□□□□ -0.78
RFC1-215ENST00000512881 DCCP43146 1447 aa10.17□□□□□ -0.78
RFC1-215ENST00000512881 ACIN1Q9UKV3 1341 aaKnown RBP10.17□□□□□ -0.78
RFC1-215ENST00000512881 CTHP32929 405 aa10.17□□□□□ -0.78
RFC1-215ENST00000512881 HPS1Q92902 700 aa10.17□□□□□ -0.78
RFC1-215ENST00000512881 FAM117AQ9C073 453 aa10.17□□□□□ -0.78
RFC1-215ENST00000512881 POLR3EQ9NVU0 708 aa10.17□□□□□ -0.78
RFC1-215ENST00000512881 NRXN3Q9Y4C0 1643 aa10.17□□□□□ -0.78
RFC1-215ENST00000512881 ROBO2Q9HCK4 1378 aa10.16□□□□□ -0.78
RFC1-215ENST00000512881 SPATA31A6Q5VVP1 1343 aa10.16□□□□□ -0.78
RFC1-215ENST00000512881 ADGRF5Q8IZF2 1346 aa10.16□□□□□ -0.78
RFC1-215ENST00000512881 NUTM2BA6NNL0 878 aaPredicted RBP10.16□□□□□ -0.78
RFC1-215ENST00000512881 NUTM2EB1AL46 878 aaPredicted RBP10.16□□□□□ -0.78
RFC1-215ENST00000512881 NUTM2AQ8IVF1 878 aaPredicted RBP10.16□□□□□ -0.78
RFC1-215ENST00000512881 CCDC144AA2RUR9 1427 aa10.16□□□□□ -0.78
RFC1-215ENST00000512881 MST1RQ04912 1400 aa10.16□□□□□ -0.78
RFC1-215ENST00000512881 SETD5Q9C0A6 1442 aa10.16□□□□□ -0.78
RFC1-215ENST00000512881 PLEKHG3A1L390 1219 aa10.15□□□□□ -0.78
RFC1-215ENST00000512881 ALDH1A1P00352 501 aa10.15□□□□□ -0.78
RFC1-215ENST00000512881 SH3D19Q5HYK7 790 aa10.15□□□□□ -0.78
RFC1-215ENST00000512881 MEX3CQ5U5Q3 659 aaKnown RBP10.15□□□□□ -0.78
RFC1-215ENST00000512881 TSC1Q92574 1164 aa10.15□□□□□ -0.78
RFC1-215ENST00000512881 DDX17Q92841 729 aaKnown RBP10.15□□□□□ -0.78
RFC1-215ENST00000512881 LRRC59Q96AG4 307 aaKnown RBP10.15□□□□□ -0.78
RFC1-215ENST00000512881 TLL2Q9Y6L7 1015 aa10.15□□□□□ -0.78
RFC1-215ENST00000512881 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.15□□□□□ -0.78
RFC1-215ENST00000512881 ADGRL3Q9HAR2 1447 aa10.15□□□□□ -0.79
RFC1-215ENST00000512881 DDRGK1Q96HY6 314 aa10.14□□□□□ -0.79
RFC1-215ENST00000512881 STK26Q9P289 416 aa10.14□□□□□ -0.79
RFC1-215ENST00000512881 SPATA31E1Q6ZUB1 1445 aa10.14□□□□□ -0.79
RFC1-215ENST00000512881 XRN1Q8IZH2 1706 aaKnown RBP10.13□□□□□ -0.79
RFC1-215ENST00000512881 HELBQ8NG08 1087 aaPredicted RBP10.13□□□□□ -0.79
RFC1-215ENST00000512881 ORAI2Q96SN7 254 aa10.13□□□□□ -0.79
RFC1-215ENST00000512881 PTCH1Q13635 1447 aa10.13□□□□□ -0.79
RFC1-215ENST00000512881 PHLPP1O60346 1717 aa10.13□□□□□ -0.79
RFC1-215ENST00000512881 ANKRD30BQ9BXX2 1392 aa10.13□□□□□ -0.79
RFC1-215ENST00000512881 SKIV2LQ15477 1246 aaKnown RBP10.12□□□□□ -0.79
RFC1-215ENST00000512881 ZNF772Q68DY9 489 aaPredicted RBP10.12□□□□□ -0.79
RFC1-215ENST00000512881 TMEM132EQ6IEE7 984 aa10.12□□□□□ -0.79
RFC1-215ENST00000512881 WAPLQ7Z5K2 1190 aa10.12□□□□□ -0.79
RFC1-215ENST00000512881 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.12□□□□□ -0.79
RFC1-215ENST00000512881 GMPR2Q9P2T1 348 aaKnown RBP10.12□□□□□ -0.79
RFC1-215ENST00000512881 COL16A1Q07092 1604 aaPredicted RBP10.11□□□□□ -0.79
RFC1-215ENST00000512881 AHDC1Q5TGY3 1603 aaPredicted RBP10.11□□□□□ -0.79
RFC1-215ENST00000512881 C1orf167Q5SNV9 1468 aa10.11□□□□□ -0.79
RFC1-215ENST00000512881 FOXJ1Q92949 421 aa10.11□□□□□ -0.79
RFC1-215ENST00000512881 ZNF775Q96BV0 537 aaPredicted RBP10.11□□□□□ -0.79
RFC1-215ENST00000512881 ASXL1Q8IXJ9 1541 aa10.11□□□□□ -0.79
RFC1-215ENST00000512881 RAB3GAP2Q9H2M9 1393 aa10.11□□□□□ -0.79
RFC1-215ENST00000512881 KIF1BO60333 1816 aa10.1□□□□□ -0.79
RFC1-215ENST00000512881 PRAG1Q86YV5 1406 aa10.1□□□□□ -0.79
RFC1-215ENST00000512881 VARSP26640 1264 aaKnown RBP10.1□□□□□ -0.79
RFC1-215ENST00000512881 C14orf93Q9H972 538 aaKnown RBP10.1□□□□□ -0.79
RFC1-215ENST00000512881 ATP13A2Q9NQ11 1180 aa10.1□□□□□ -0.79
RFC1-215ENST00000512881 LRP6O75581 1613 aa10.1□□□□□ -0.79
RFC1-215ENST00000512881 LRPPRCP42704 1394 aaKnown RBP10.1□□□□□ -0.79
RFC1-215ENST00000512881 C4orf48Q5BLP8 95 aa10.09□□□□□ -0.79
RFC1-215ENST00000512881 ESCO1Q5FWF5 840 aa10.09□□□□□ -0.79
RFC1-215ENST00000512881 PROCA1Q8NCQ7 364 aaPredicted RBP10.09□□□□□ -0.79
RFC1-215ENST00000512881 ABCC11Q96J66 1382 aa10.09□□□□□ -0.79
RFC1-215ENST00000512881 SOS2Q07890 1332 aaPredicted RBP10.08□□□□□ -0.8
RFC1-215ENST00000512881 CFAP70Q5T0N1 1121 aa10.08□□□□□ -0.8
RFC1-215ENST00000512881 MPNDQ8N594 471 aa10.08□□□□□ -0.8
RFC1-215ENST00000512881 SIRT1Q96EB6 747 aa10.08□□□□□ -0.8
RFC1-215ENST00000512881 PNPLA6Q8IY17 1366 aa10.08□□□□□ -0.8
RFC1-215ENST00000512881 RXRBP28702 533 aa10.07□□□□□ -0.8
RFC1-215ENST00000512881 C8orf37Q96NL8 207 aa10.07□□□□□ -0.8
RFC1-215ENST00000512881 WASF2Q9Y6W5 498 aa10.07□□□□□ -0.8
RFC1-215ENST00000512881 PIK3C2GO75747 1445 aa10.07□□□□□ -0.8
RFC1-215ENST00000512881 AFF2P51816 1311 aa10.07□□□□□ -0.8
RFC1-215ENST00000512881 PLEKHH1Q9ULM0 1364 aa10.06□□□□□ -0.8
RFC1-215ENST00000512881 FOXO3O43524 673 aa10.06□□□□□ -0.8
RFC1-215ENST00000512881 ADAMTS2O95450 1211 aa10.06□□□□□ -0.8
RFC1-215ENST00000512881 CTDSPL2Q05D32 466 aa10.06□□□□□ -0.8
RFC1-215ENST00000512881 PPP2R2DQ66LE6 453 aa10.06□□□□□ -0.8
RFC1-215ENST00000512881 TECPR2O15040 1411 aa10.06□□□□□ -0.8
RFC1-215ENST00000512881 DHX57Q6P158 1386 aaKnown RBP10.05□□□□□ -0.8
RFC1-215ENST00000512881 SH3RF1Q7Z6J0 888 aa10.05□□□□□ -0.8
RFC1-215ENST00000512881 FAM174AQ8TBP5 190 aa10.05□□□□□ -0.8
RFC1-215ENST00000512881 NGLY1Q96IV0 654 aa10.05□□□□□ -0.8
RFC1-215ENST00000512881 QTRT2Q9H974 415 aaKnown RBP10.05□□□□□ -0.8
RFC1-215ENST00000512881 YTHDC2Q9H6S0 1430 aaKnown RBP10.05□□□□□ -0.8
RFC1-215ENST00000512881 NPHP3Q7Z494 1330 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms